EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000012930 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3190 bases
Position: chrFKLU01000430.1:30412-33601
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000016780	RRM_1	PF00076.22	3.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000017727	-	735	-	ENSLBEP00000016780	244 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000012930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000012930	-	99	88.302	ENSLBEG00000005387	-	99	89.434
ENSLBEG00000012930	-	99	50.593	ENSLBEG00000023118	alyref	88	50.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012930	-	100	69.291	ENSAPOG00000000183	-	99	70.866	Acanthochromis_polyacanthus
ENSLBEG00000012930	-	99	45.620	ENSACIG00000006351	alyref	97	47.653	Amphilophus_citrinellus
ENSLBEG00000012930	-	99	60.223	ENSACIG00000020351	-	99	59.259	Amphilophus_citrinellus
ENSLBEG00000012930	-	100	66.275	ENSAOCG00000019305	-	99	69.531	Amphiprion_ocellaris
ENSLBEG00000012930	-	99	47.794	ENSAOCG00000014012	alyref	99	47.636	Amphiprion_ocellaris
ENSLBEG00000012930	-	100	65.490	ENSAPEG00000013527	-	99	69.141	Amphiprion_percula
ENSLBEG00000012930	-	100	48.175	ENSAPEG00000014603	alyref	99	47.636	Amphiprion_percula
ENSLBEG00000012930	-	98	67.188	ENSATEG00000000382	-	99	70.000	Anabas_testudineus
ENSLBEG00000012930	-	99	46.595	ENSATEG00000004307	alyref	99	46.763	Anabas_testudineus
ENSLBEG00000012930	-	57	59.420	ENSAPLG00000014745	-	99	58.741	Anas_platyrhynchos
ENSLBEG00000012930	-	99	46.715	ENSACLG00000008432	alyref	99	48.375	Astatotilapia_calliptera
ENSLBEG00000012930	-	99	65.019	ENSACLG00000010184	-	98	65.267	Astatotilapia_calliptera
ENSLBEG00000012930	-	99	45.423	ENSAMXG00000007359	alyref	99	49.123	Astyanax_mexicanus
ENSLBEG00000012930	-	99	39.552	ENSCING00000013568	-	99	41.455	Ciona_intestinalis
ENSLBEG00000012930	-	99	44.747	ENSCSAVG00000003324	-	99	44.358	Ciona_savignyi
ENSLBEG00000012930	-	99	48.339	ENSCSEG00000017800	alyref	99	50.549	Cynoglossus_semilaevis
ENSLBEG00000012930	-	99	49.077	ENSCVAG00000014869	alyref	99	48.897	Cyprinodon_variegatus
ENSLBEG00000012930	-	99	59.289	ENSCVAG00000007789	-	98	64.427	Cyprinodon_variegatus
ENSLBEG00000012930	-	100	45.833	ENSDARG00000077732	alyref	99	48.057	Danio_rerio
ENSLBEG00000012930	-	98	38.628	FBgn0010774	Ref1	98	37.193	Drosophila_melanogaster
ENSLBEG00000012930	-	99	38.760	ENSEBUG00000006305	alyref	99	39.922	Eptatretus_burgeri
ENSLBEG00000012930	-	99	44.828	ENSEBUG00000008253	alyref	95	45.283	Eptatretus_burgeri
ENSLBEG00000012930	-	99	48.000	ENSELUG00000017178	alyref	99	49.819	Esox_lucius
ENSLBEG00000012930	-	99	54.023	ENSELUG00000008849	-	99	58.238	Esox_lucius
ENSLBEG00000012930	-	63	62.092	ENSFALG00000011923	-	94	62.658	Ficedula_albicollis
ENSLBEG00000012930	-	99	49.084	ENSFHEG00000019426	alyref	99	45.000	Fundulus_heteroclitus
ENSLBEG00000012930	-	99	61.660	ENSFHEG00000004698	-	98	66.403	Fundulus_heteroclitus
ENSLBEG00000012930	-	73	64.921	ENSGMOG00000013122	-	100	65.079	Gadus_morhua
ENSLBEG00000012930	-	99	46.768	ENSGMOG00000009882	alyref	99	48.315	Gadus_morhua
ENSLBEG00000012930	-	99	48.746	ENSGAFG00000006014	alyref	99	46.739	Gambusia_affinis
ENSLBEG00000012930	-	99	59.524	ENSGAFG00000007573	-	97	61.628	Gambusia_affinis
ENSLBEG00000012930	-	99	46.715	ENSHBUG00000020196	alyref	99	48.375	Haplochromis_burtoni
ENSLBEG00000012930	-	99	65.660	ENSHBUG00000001454	-	98	65.530	Haplochromis_burtoni
ENSLBEG00000012930	-	99	68.379	ENSHCOG00000012825	-	95	70.079	Hippocampus_comes
ENSLBEG00000012930	-	99	50.929	ENSIPUG00000009469	alyref	98	51.460	Ictalurus_punctatus
ENSLBEG00000012930	-	77	52.261	ENSSTOG00000016570	-	91	51.913	Ictidomys_tridecemlineatus
ENSLBEG00000012930	-	100	61.961	ENSKMAG00000006462	-	99	61.776	Kryptolebias_marmoratus
ENSLBEG00000012930	-	99	46.182	ENSKMAG00000008912	alyref	99	49.462	Kryptolebias_marmoratus
ENSLBEG00000012930	-	82	52.294	ENSLOCG00000013879	alyref	82	53.234	Lepisosteus_oculatus
ENSLBEG00000012930	-	99	50.916	ENSMAMG00000003034	alyref	99	49.817	Mastacembelus_armatus
ENSLBEG00000012930	-	100	67.451	ENSMAMG00000005464	-	99	69.020	Mastacembelus_armatus
ENSLBEG00000012930	-	99	46.715	ENSMZEG00005008639	alyref	99	48.375	Maylandia_zebra
ENSLBEG00000012930	-	99	64.639	ENSMZEG00005012096	-	98	65.267	Maylandia_zebra
ENSLBEG00000012930	-	99	50.916	ENSMMOG00000012458	alyref	96	49.818	Mola_mola
ENSLBEG00000012930	-	100	56.126	ENSMMOG00000007032	-	99	56.126	Mola_mola
ENSLBEG00000012930	-	100	69.380	ENSMALG00000006054	-	99	69.380	Monopterus_albus
ENSLBEG00000012930	-	76	48.421	ENSMLUG00000028605	-	98	41.544	Myotis_lucifugus
ENSLBEG00000012930	-	98	41.971	ENSMLUG00000014372	-	98	44.610	Myotis_lucifugus
ENSLBEG00000012930	-	99	41.259	ENSMLUG00000004098	-	99	46.038	Myotis_lucifugus
ENSLBEG00000012930	-	89	45.701	ENSMLUG00000030671	-	98	42.164	Myotis_lucifugus
ENSLBEG00000012930	-	98	38.380	ENSMLUG00000022178	-	98	41.353	Myotis_lucifugus
ENSLBEG00000012930	-	99	43.284	ENSMLUG00000006521	-	99	45.725	Myotis_lucifugus
ENSLBEG00000012930	-	98	44.061	ENSMLUG00000009247	-	98	44.828	Myotis_lucifugus
ENSLBEG00000012930	-	98	43.382	ENSMLUG00000022467	-	98	41.912	Myotis_lucifugus
ENSLBEG00000012930	-	99	49.421	ENSNGAG00000022014	-	99	53.815	Nannospalax_galili
ENSLBEG00000012930	-	99	65.779	ENSNBRG00000017460	-	99	66.160	Neolamprologus_brichardi
ENSLBEG00000012930	-	99	46.377	ENSNBRG00000001747	alyref	99	48.387	Neolamprologus_brichardi
ENSLBEG00000012930	-	99	65.900	ENSONIG00000003296	-	98	67.050	Oreochromis_niloticus
ENSLBEG00000012930	-	99	47.687	ENSONIG00000019434	alyref	99	48.227	Oreochromis_niloticus
ENSLBEG00000012930	-	99	55.518	ENSORLG00000001620	-	88	55.518	Oryzias_latipes
ENSLBEG00000012930	-	100	44.928	ENSORLG00020011942	alyref	99	47.810	Oryzias_latipes_hni
ENSLBEG00000012930	-	99	65.748	ENSORLG00020015673	-	99	66.016	Oryzias_latipes_hni
ENSLBEG00000012930	-	100	45.255	ENSORLG00015022664	alyref	99	48.162	Oryzias_latipes_hsok
ENSLBEG00000012930	-	99	66.142	ENSORLG00015015143	-	99	65.625	Oryzias_latipes_hsok
ENSLBEG00000012930	-	99	62.992	ENSOMEG00000007158	-	97	62.692	Oryzias_melastigma
ENSLBEG00000012930	-	99	46.886	ENSOMEG00000019176	alyref	99	45.620	Oryzias_melastigma
ENSLBEG00000012930	-	73	59.669	ENSPPAG00000036403	-	68	61.202	Pan_paniscus
ENSLBEG00000012930	-	99	48.571	ENSPKIG00000007070	alyref	99	50.000	Paramormyrops_kingsleyae
ENSLBEG00000012930	-	99	51.471	ENSPKIG00000006233	-	80	53.640	Paramormyrops_kingsleyae
ENSLBEG00000012930	-	99	49.815	ENSPMGG00000016600	alyref	90	50.000	Periophthalmus_magnuspinnatus
ENSLBEG00000012930	-	64	60.355	ENSPMGG00000012994	-	93	56.364	Periophthalmus_magnuspinnatus
ENSLBEG00000012930	-	99	52.846	ENSPEMG00000016628	-	99	53.441	Peromyscus_maniculatus_bairdii
ENSLBEG00000012930	-	99	45.714	ENSPFOG00000022825	alyref	98	47.653	Poecilia_formosa
ENSLBEG00000012930	-	99	59.843	ENSPFOG00000017094	-	99	64.062	Poecilia_formosa
ENSLBEG00000012930	-	99	59.843	ENSPLAG00000014380	-	99	64.062	Poecilia_latipinna
ENSLBEG00000012930	-	99	48.921	ENSPLAG00000006948	alyref	99	47.826	Poecilia_latipinna
ENSLBEG00000012930	-	99	59.843	ENSPMEG00000023039	-	99	64.062	Poecilia_mexicana
ENSLBEG00000012930	-	99	49.286	ENSPMEG00000003547	alyref	99	47.653	Poecilia_mexicana
ENSLBEG00000012930	-	99	58.824	ENSPREG00000003649	-	99	62.353	Poecilia_reticulata
ENSLBEG00000012930	-	99	46.237	ENSPREG00000015795	alyref	99	48.746	Poecilia_reticulata
ENSLBEG00000012930	-	99	63.636	ENSPNYG00000002879	-	98	64.528	Pundamilia_nyererei
ENSLBEG00000012930	-	99	46.715	ENSPNYG00000017498	alyref	99	48.375	Pundamilia_nyererei
ENSLBEG00000012930	-	99	44.211	ENSPNAG00000002531	alyref	99	48.175	Pygocentrus_nattereri
ENSLBEG00000012930	-	73	58.564	ENSSBOG00000030924	-	83	60.109	Saimiri_boliviensis_boliviensis
ENSLBEG00000012930	-	99	41.026	ENSSHAG00000012866	-	99	42.336	Sarcophilus_harrisii
ENSLBEG00000012930	-	99	47.561	ENSSHAG00000000609	-	99	43.359	Sarcophilus_harrisii
ENSLBEG00000012930	-	74	50.490	ENSSFOG00015003678	alyref	83	55.440	Scleropages_formosus
ENSLBEG00000012930	-	82	55.288	ENSSFOG00015003923	alyref	70	54.450	Scleropages_formosus
ENSLBEG00000012930	-	99	46.350	ENSSMAG00000009283	alyref	99	49.104	Scophthalmus_maximus
ENSLBEG00000012930	-	99	70.930	ENSSMAG00000011169	-	98	74.231	Scophthalmus_maximus
ENSLBEG00000012930	-	99	47.426	ENSSDUG00000016158	alyref	99	48.375	Seriola_dumerili
ENSLBEG00000012930	-	99	48.905	ENSSLDG00000017803	alyref	99	49.097	Seriola_lalandi_dorsalis
ENSLBEG00000012930	-	99	72.549	ENSSPAG00000017028	-	96	73.725	Stegastes_partitus
ENSLBEG00000012930	-	99	63.780	ENSTRUG00000003051	-	99	59.551	Takifugu_rubripes
ENSLBEG00000012930	-	99	44.604	ENSTNIG00000011595	alyref	99	48.649	Tetraodon_nigroviridis
ENSLBEG00000012930	-	99	62.000	ENSTNIG00000014136	-	99	59.036	Tetraodon_nigroviridis
ENSLBEG00000012930	-	74	59.341	ENSVVUG00000000272	-	81	60.326	Vulpes_vulpes
ENSLBEG00000012930	-	99	49.104	ENSXCOG00000018047	alyref	98	45.230	Xiphophorus_couchianus
ENSLBEG00000012930	-	99	59.843	ENSXMAG00000018086	-	99	64.567	Xiphophorus_maculatus
ENSLBEG00000012930	-	99	49.104	ENSXMAG00000012218	alyref	98	45.230	Xiphophorus_maculatus