EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000012998 (Gene tree)
Gene ID: 109998147
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 11001 bases
Position: chrFKLU01000465.1:257268-268268
Accession: 109998147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000016843	RRM_1	PF00076.22	7.1e-56	1	3
ENSLBEP00000016843	RRM_1	PF00076.22	7.1e-56	2	3
ENSLBEP00000016843	RRM_1	PF00076.22	7.1e-56	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000017791	-	3470	XM_020652895	ENSLBEP00000016843	777 (aa)	XP_020508551	UPI0009B48AAE

Gene Model

Click here to download ENSLBEG00000012998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000012998's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000012998	rbm28	100	50.948	ENSG00000106344	RBM28	100	47.393	Homo_sapiens
ENSLBEG00000012998	rbm28	56	74.091	ENSAPOG00000015512	rbm28	59	74.058	Acanthochromis_polyacanthus
ENSLBEG00000012998	rbm28	96	55.556	ENSAMEG00000004776	RBM28	66	56.114	Ailuropoda_melanoleuca
ENSLBEG00000012998	rbm28	54	72.749	ENSACIG00000023153	rbm28	91	72.749	Amphilophus_citrinellus
ENSLBEG00000012998	rbm28	56	73.864	ENSAOCG00000000462	rbm28	59	73.836	Amphiprion_ocellaris
ENSLBEG00000012998	rbm28	56	73.636	ENSAPEG00000012996	rbm28	59	73.614	Amphiprion_percula
ENSLBEG00000012998	rbm28	100	50.126	ENSANAG00000033922	RBM28	77	65.000	Aotus_nancymaae
ENSLBEG00000012998	rbm28	100	66.285	ENSACLG00000025024	rbm28	59	72.907	Astatotilapia_calliptera
ENSLBEG00000012998	rbm28	56	58.314	ENSAMXG00000000763	rbm28	99	59.226	Astyanax_mexicanus
ENSLBEG00000012998	rbm28	100	49.427	ENSCJAG00000017731	RBM28	76	65.000	Callithrix_jacchus
ENSLBEG00000012998	rbm28	100	50.192	ENSCAFG00000001667	RBM28	59	55.188	Canis_familiaris
ENSLBEG00000012998	rbm28	100	50.192	ENSCAFG00020021648	RBM28	59	55.188	Canis_lupus_dingo
ENSLBEG00000012998	rbm28	100	50.383	ENSCHIG00000014146	RBM28	59	56.000	Capra_hircus
ENSLBEG00000012998	rbm28	100	49.361	ENSTSYG00000002892	RBM28	78	62.500	Carlito_syrichta
ENSLBEG00000012998	rbm28	77	41.244	ENSCAPG00000013218	RBM28	58	39.286	Cavia_aperea
ENSLBEG00000012998	rbm28	100	49.553	ENSCPOG00000006253	RBM28	58	54.911	Cavia_porcellus
ENSLBEG00000012998	rbm28	65	65.000	ENSCCAG00000035105	RBM28	77	65.000	Cebus_capucinus
ENSLBEG00000012998	rbm28	100	49.936	ENSCATG00000040497	RBM28	76	65.000	Cercocebus_atys
ENSLBEG00000012998	rbm28	100	46.716	ENSCLAG00000003707	RBM28	87	56.027	Chinchilla_lanigera
ENSLBEG00000012998	rbm28	100	49.810	ENSCSAG00000010161	RBM28	57	57.079	Chlorocebus_sabaeus
ENSLBEG00000012998	rbm28	56	52.672	ENSCHOG00000001994	-	63	52.672	Choloepus_hoffmanni
ENSLBEG00000012998	rbm28	57	65.000	ENSCANG00000038397	RBM28	73	65.000	Colobus_angolensis_palliatus
ENSLBEG00000012998	rbm28	63	52.130	ENSCGRG00001021278	Rbm28	56	55.134	Cricetulus_griseus_chok1gshd
ENSLBEG00000012998	rbm28	63	52.130	ENSCGRG00000005098	Rbm28	58	55.134	Cricetulus_griseus_crigri
ENSLBEG00000012998	rbm28	100	63.822	ENSCSEG00000004212	rbm28	60	68.653	Cynoglossus_semilaevis
ENSLBEG00000012998	rbm28	57	71.082	ENSCVAG00000010493	rbm28	58	71.239	Cyprinodon_variegatus
ENSLBEG00000012998	rbm28	100	49.367	ENSDNOG00000001124	RBM28	58	54.967	Dasypus_novemcinctus
ENSLBEG00000012998	rbm28	63	54.509	ENSDORG00000004184	Rbm28	86	56.250	Dipodomys_ordii
ENSLBEG00000012998	rbm28	54	50.474	ENSETEG00000007130	RBM28	56	50.474	Echinops_telfairi
ENSLBEG00000012998	rbm28	85	42.694	ENSEBUG00000004419	rbm28	90	43.418	Eptatretus_burgeri
ENSLBEG00000012998	rbm28	63	54.326	ENSEASG00005008528	RBM28	58	56.512	Equus_asinus_asinus
ENSLBEG00000012998	rbm28	63	53.614	ENSECAG00000007745	RBM28	58	55.727	Equus_caballus
ENSLBEG00000012998	rbm28	100	48.030	ENSEEUG00000002389	RBM28	58	52.000	Erinaceus_europaeus
ENSLBEG00000012998	rbm28	100	57.179	ENSELUG00000020602	rbm28	59	62.500	Esox_lucius
ENSLBEG00000012998	rbm28	100	50.702	ENSFCAG00000000946	RBM28	80	65.000	Felis_catus
ENSLBEG00000012998	rbm28	100	50.000	ENSFDAG00000010169	RBM28	58	55.580	Fukomys_damarensis
ENSLBEG00000012998	rbm28	99	56.145	ENSGMOG00000007091	rbm28	91	63.348	Gadus_morhua
ENSLBEG00000012998	rbm28	57	70.067	ENSGAFG00000004802	rbm28	98	70.067	Gambusia_affinis
ENSLBEG00000012998	rbm28	56	74.550	ENSGACG00000012612	rbm28	75	74.336	Gasterosteus_aculeatus
ENSLBEG00000012998	rbm28	81	53.398	ENSGAGG00000008873	RBM28	76	65.116	Gopherus_agassizii
ENSLBEG00000012998	rbm28	95	49.799	ENSGGOG00000004644	RBM28	59	56.404	Gorilla_gorilla
ENSLBEG00000012998	rbm28	94	66.397	ENSHBUG00000009611	rbm28	56	73.594	Haplochromis_burtoni
ENSLBEG00000012998	rbm28	100	49.561	ENSHGLG00000005409	RBM28	59	54.607	Heterocephalus_glaber_female
ENSLBEG00000012998	rbm28	100	49.561	ENSHGLG00100016458	RBM28	59	54.607	Heterocephalus_glaber_male
ENSLBEG00000012998	rbm28	99	49.807	ENSHCOG00000010597	rbm28	84	56.689	Hippocampus_comes
ENSLBEG00000012998	rbm28	55	47.765	ENSIPUG00000007103	rbm28	81	47.765	Ictalurus_punctatus
ENSLBEG00000012998	rbm28	100	50.127	ENSSTOG00000002169	RBM28	58	54.746	Ictidomys_tridecemlineatus
ENSLBEG00000012998	rbm28	79	55.012	ENSJJAG00000022400	Rbm28	59	55.116	Jaculus_jaculus
ENSLBEG00000012998	rbm28	57	69.488	ENSKMAG00000013348	rbm28	59	69.488	Kryptolebias_marmoratus
ENSLBEG00000012998	rbm28	100	58.883	ENSLOCG00000015541	rbm28	75	62.642	Lepisosteus_oculatus
ENSLBEG00000012998	rbm28	100	49.563	ENSLAFG00000010717	RBM28	57	55.204	Loxodonta_africana
ENSLBEG00000012998	rbm28	100	49.936	ENSMFAG00000031036	RBM28	76	65.000	Macaca_fascicularis
ENSLBEG00000012998	rbm28	100	49.808	ENSMMUG00000007250	RBM28	76	65.000	Macaca_mulatta
ENSLBEG00000012998	rbm28	100	50.891	ENSMNEG00000036970	RBM28	76	65.000	Macaca_nemestrina
ENSLBEG00000012998	rbm28	100	68.838	ENSMAMG00000008525	rbm28	59	74.723	Mastacembelus_armatus
ENSLBEG00000012998	rbm28	93	65.075	ENSMZEG00005019625	rbm28	64	72.907	Maylandia_zebra
ENSLBEG00000012998	rbm28	63	52.024	ENSMAUG00000002263	Rbm28	56	55.257	Mesocricetus_auratus
ENSLBEG00000012998	rbm28	63	53.521	ENSMICG00000000107	RBM28	60	56.787	Microcebus_murinus
ENSLBEG00000012998	rbm28	100	51.083	ENSMOCG00000014615	Rbm28	59	56.195	Microtus_ochrogaster
ENSLBEG00000012998	rbm28	57	69.005	ENSMMOG00000008600	rbm28	91	69.005	Mola_mola
ENSLBEG00000012998	rbm28	100	50.702	ENSMODG00000015151	RBM28	58	55.111	Monodelphis_domestica
ENSLBEG00000012998	rbm28	57	73.543	ENSMALG00000006419	rbm28	58	73.543	Monopterus_albus
ENSLBEG00000012998	rbm28	100	49.872	MGP_CAROLIEiJ_G0028162	Rbm28	58	56.208	Mus_caroli
ENSLBEG00000012998	rbm28	100	50.446	ENSMUSG00000029701	Rbm28	58	56.208	Mus_musculus
ENSLBEG00000012998	rbm28	100	49.937	MGP_PahariEiJ_G0021920	Rbm28	59	55.921	Mus_pahari
ENSLBEG00000012998	rbm28	100	50.318	MGP_SPRETEiJ_G0029162	Rbm28	58	55.982	Mus_spretus
ENSLBEG00000012998	rbm28	100	49.299	ENSMPUG00000006511	RBM28	59	55.482	Mustela_putorius_furo
ENSLBEG00000012998	rbm28	63	52.738	ENSMLUG00000002186	RBM28	58	54.545	Myotis_lucifugus
ENSLBEG00000012998	rbm28	100	48.564	ENSNGAG00000006480	-	58	52.993	Nannospalax_galili
ENSLBEG00000012998	rbm28	100	47.429	ENSNGAG00000017946	-	57	53.273	Nannospalax_galili
ENSLBEG00000012998	rbm28	100	49.810	ENSNLEG00000012307	RBM28	78	65.000	Nomascus_leucogenys
ENSLBEG00000012998	rbm28	80	58.580	ENSMEUG00000009611	RBM28	84	59.639	Notamacropus_eugenii
ENSLBEG00000012998	rbm28	71	57.609	ENSODEG00000013217	-	83	56.378	Octodon_degus
ENSLBEG00000012998	rbm28	100	49.433	ENSODEG00000003213	-	57	54.072	Octodon_degus
ENSLBEG00000012998	rbm28	100	66.963	ENSONIG00000014924	rbm28	59	73.348	Oreochromis_niloticus
ENSLBEG00000012998	rbm28	63	52.342	ENSOCUG00000003009	RBM28	57	55.481	Oryctolagus_cuniculus
ENSLBEG00000012998	rbm28	100	64.994	ENSORLG00000009636	rbm28	59	69.144	Oryzias_latipes
ENSLBEG00000012998	rbm28	57	68.764	ENSORLG00020002123	rbm28	61	68.919	Oryzias_latipes_hni
ENSLBEG00000012998	rbm28	85	73.585	ENSORLG00015015030	rbm28	98	73.585	Oryzias_latipes_hsok
ENSLBEG00000012998	rbm28	57	71.586	ENSOMEG00000007801	rbm28	60	71.586	Oryzias_melastigma
ENSLBEG00000012998	rbm28	81	62.500	ENSOGAG00000006011	RBM28	76	62.500	Otolemur_garnettii
ENSLBEG00000012998	rbm28	100	50.510	ENSOARG00000002547	RBM28	59	55.556	Ovis_aries
ENSLBEG00000012998	rbm28	100	50.319	ENSPPAG00000041730	RBM28	76	65.000	Pan_paniscus
ENSLBEG00000012998	rbm28	100	50.383	ENSPPRG00000004420	RBM28	80	65.000	Panthera_pardus
ENSLBEG00000012998	rbm28	100	50.447	ENSPTIG00000008550	RBM28	80	65.000	Panthera_tigris_altaica
ENSLBEG00000012998	rbm28	100	50.636	ENSPTRG00000019659	RBM28	76	65.000	Pan_troglodytes
ENSLBEG00000012998	rbm28	100	49.556	ENSPANG00000022295	RBM28	76	65.000	Papio_anubis
ENSLBEG00000012998	rbm28	100	54.424	ENSPKIG00000023453	rbm28	62	56.612	Paramormyrops_kingsleyae
ENSLBEG00000012998	rbm28	100	56.170	ENSPMGG00000012840	rbm28	100	68.246	Periophthalmus_magnuspinnatus
ENSLBEG00000012998	rbm28	100	48.416	ENSPCIG00000012810	RBM28	59	54.566	Phascolarctos_cinereus
ENSLBEG00000012998	rbm28	57	69.623	ENSPFOG00000018209	rbm28	59	69.623	Poecilia_formosa
ENSLBEG00000012998	rbm28	99	63.764	ENSPLAG00000016078	rbm28	56	70.112	Poecilia_latipinna
ENSLBEG00000012998	rbm28	100	62.643	ENSPMEG00000004292	rbm28	59	70.067	Poecilia_mexicana
ENSLBEG00000012998	rbm28	99	62.135	ENSPREG00000014287	rbm28	74	69.575	Poecilia_reticulata
ENSLBEG00000012998	rbm28	100	50.127	ENSPPYG00000017975	RBM28	57	56.404	Pongo_abelii
ENSLBEG00000012998	rbm28	72	52.646	ENSPCAG00000008223	RBM28	83	52.316	Procavia_capensis
ENSLBEG00000012998	rbm28	68	65.000	ENSPCOG00000016797	RBM28	75	65.000	Propithecus_coquereli
ENSLBEG00000012998	rbm28	75	61.751	ENSPVAG00000005443	RBM28	73	64.356	Pteropus_vampyrus
ENSLBEG00000012998	rbm28	100	65.863	ENSPNYG00000014003	rbm28	59	72.687	Pundamilia_nyererei
ENSLBEG00000012998	rbm28	100	50.256	ENSRNOG00000005468	Rbm28	58	56.125	Rattus_norvegicus
ENSLBEG00000012998	rbm28	100	49.682	ENSRBIG00000033990	RBM28	76	65.000	Rhinopithecus_bieti
ENSLBEG00000012998	rbm28	100	50.064	ENSRROG00000040747	RBM28	76	65.000	Rhinopithecus_roxellana
ENSLBEG00000012998	rbm28	86	46.565	ENSSBOG00000012308	RBM28	74	54.464	Saimiri_boliviensis_boliviensis
ENSLBEG00000012998	rbm28	96	47.594	ENSSHAG00000017017	RBM28	59	54.920	Sarcophilus_harrisii
ENSLBEG00000012998	rbm28	100	53.748	ENSSFOG00015001231	rbm28	60	61.991	Scleropages_formosus
ENSLBEG00000012998	rbm28	57	68.973	ENSSMAG00000003885	rbm28	90	68.973	Scophthalmus_maximus
ENSLBEG00000012998	rbm28	57	78.146	ENSSDUG00000014270	rbm28	88	78.146	Seriola_dumerili
ENSLBEG00000012998	rbm28	100	69.936	ENSSLDG00000020099	rbm28	59	77.925	Seriola_lalandi_dorsalis
ENSLBEG00000012998	rbm28	72	60.533	ENSSARG00000008303	RBM28	80	59.137	Sorex_araneus
ENSLBEG00000012998	rbm28	65	63.235	ENSSPUG00000000838	RBM28	80	63.235	Sphenodon_punctatus
ENSLBEG00000012998	rbm28	56	74.944	ENSSPAG00000023305	rbm28	62	75.664	Stegastes_partitus
ENSLBEG00000012998	rbm28	100	49.629	ENSSSCG00000031847	RBM28	59	55.824	Sus_scrofa
ENSLBEG00000012998	rbm28	100	63.510	ENSTRUG00000013311	rbm28	58	69.095	Takifugu_rubripes
ENSLBEG00000012998	rbm28	99	61.217	ENSTNIG00000017962	rbm28	59	69.643	Tetraodon_nigroviridis
ENSLBEG00000012998	rbm28	100	50.508	ENSTTRG00000013647	RBM28	59	56.360	Tursiops_truncatus
ENSLBEG00000012998	rbm28	100	46.962	ENSUAMG00000006949	RBM28	83	56.190	Ursus_americanus
ENSLBEG00000012998	rbm28	100	49.936	ENSUMAG00000005997	RBM28	58	56.347	Ursus_maritimus
ENSLBEG00000012998	rbm28	84	45.537	ENSVPAG00000008304	RBM28	70	70.330	Vicugna_pacos
ENSLBEG00000012998	rbm28	100	50.064	ENSVVUG00000007270	RBM28	59	54.967	Vulpes_vulpes
ENSLBEG00000012998	rbm28	99	47.450	ENSXETG00000009271	rbm28	59	51.627	Xenopus_tropicalis
ENSLBEG00000012998	rbm28	57	65.188	ENSXCOG00000020357	rbm28	92	65.188	Xiphophorus_couchianus
ENSLBEG00000012998	rbm28	57	69.196	ENSXMAG00000004415	rbm28	59	69.507	Xiphophorus_maculatus