EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000013105 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 7586 bases
Position: chrFKLU01000177.1:824043-831628
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000016976	RRM_1	PF00076.22	8.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000017930	-	5272	-	ENSLBEP00000016976	808 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000013105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000013105	-	100	61.649	ENSLBEG00000008274	rbm15	96	61.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000013105	-	100	53.289	ENSG00000162775	RBM15	94	53.958	Homo_sapiens
ENSLBEG00000013105	-	100	77.317	ENSAPOG00000017590	-	100	77.764	Acanthochromis_polyacanthus
ENSLBEG00000013105	-	100	62.350	ENSAPOG00000018748	rbm15	96	62.830	Acanthochromis_polyacanthus
ENSLBEG00000013105	-	86	57.422	ENSAMEG00000011540	RBM15	92	54.120	Ailuropoda_melanoleuca
ENSLBEG00000013105	-	100	75.699	ENSACIG00000019811	-	96	76.428	Amphilophus_citrinellus
ENSLBEG00000013105	-	100	60.906	ENSACIG00000004343	rbm15	96	61.740	Amphilophus_citrinellus
ENSLBEG00000013105	-	100	77.927	ENSAOCG00000021969	-	96	77.927	Amphiprion_ocellaris
ENSLBEG00000013105	-	100	61.871	ENSAOCG00000016849	rbm15	96	62.350	Amphiprion_ocellaris
ENSLBEG00000013105	-	100	77.805	ENSAPEG00000015151	-	94	77.805	Amphiprion_percula
ENSLBEG00000013105	-	100	61.990	ENSAPEG00000020077	rbm15	96	62.470	Amphiprion_percula
ENSLBEG00000013105	-	100	61.585	ENSATEG00000019337	rbm15	96	62.065	Anabas_testudineus
ENSLBEG00000013105	-	100	78.545	ENSATEG00000005926	-	96	78.476	Anabas_testudineus
ENSLBEG00000013105	-	100	53.341	ENSANAG00000020673	RBM15	91	54.009	Aotus_nancymaae
ENSLBEG00000013105	-	100	61.098	ENSACLG00000001673	rbm15	96	61.337	Astatotilapia_calliptera
ENSLBEG00000013105	-	100	75.791	ENSACLG00000022961	-	93	75.791	Astatotilapia_calliptera
ENSLBEG00000013105	-	100	61.720	ENSAMXG00000026103	rbm15	96	62.898	Astyanax_mexicanus
ENSLBEG00000013105	-	86	58.388	ENSBTAG00000012555	RBM15	92	54.566	Bos_taurus
ENSLBEG00000013105	-	100	53.341	ENSCJAG00000003411	RBM15	91	54.009	Callithrix_jacchus
ENSLBEG00000013105	-	100	53.667	ENSCAFG00000019789	RBM15	91	54.181	Canis_familiaris
ENSLBEG00000013105	-	100	53.667	ENSCAFG00020009671	RBM15	91	54.181	Canis_lupus_dingo
ENSLBEG00000013105	-	86	58.127	ENSCHIG00000026774	RBM15	92	54.454	Capra_hircus
ENSLBEG00000013105	-	87	57.682	ENSTSYG00000000106	RBM15	91	54.353	Carlito_syrichta
ENSLBEG00000013105	-	74	55.969	ENSCAPG00000013057	RBM15	96	55.349	Cavia_aperea
ENSLBEG00000013105	-	86	56.771	ENSCPOG00000007520	RBM15	92	53.512	Cavia_porcellus
ENSLBEG00000013105	-	100	53.341	ENSCCAG00000036780	RBM15	91	54.009	Cebus_capucinus
ENSLBEG00000013105	-	100	53.289	ENSCATG00000015743	RBM15	91	53.958	Cercocebus_atys
ENSLBEG00000013105	-	86	57.366	ENSCLAG00000008406	RBM15	92	54.018	Chinchilla_lanigera
ENSLBEG00000013105	-	100	53.289	ENSCSAG00000001563	RBM15	90	53.958	Chlorocebus_sabaeus
ENSLBEG00000013105	-	86	54.883	ENSCPBG00000001662	RBM15	97	53.066	Chrysemys_picta_bellii
ENSLBEG00000013105	-	100	53.177	ENSCANG00000038717	RBM15	90	53.846	Colobus_angolensis_palliatus
ENSLBEG00000013105	-	86	57.723	ENSCGRG00001001004	Rbm15	92	54.087	Cricetulus_griseus_chok1gshd
ENSLBEG00000013105	-	86	57.723	ENSCGRG00000010592	Rbm15	92	54.087	Cricetulus_griseus_crigri
ENSLBEG00000013105	-	100	66.985	ENSCSEG00000002314	-	96	66.985	Cynoglossus_semilaevis
ENSLBEG00000013105	-	100	61.224	ENSCSEG00000004062	rbm15	96	61.345	Cynoglossus_semilaevis
ENSLBEG00000013105	-	100	68.856	ENSCVAG00000004005	-	96	69.100	Cyprinodon_variegatus
ENSLBEG00000013105	-	100	60.817	ENSCVAG00000013185	rbm15	96	61.058	Cyprinodon_variegatus
ENSLBEG00000013105	-	100	63.082	ENSDARG00000073847	rbm15	96	63.560	Danio_rerio
ENSLBEG00000013105	-	58	62.308	ENSDNOG00000032007	RBM15	90	56.615	Dasypus_novemcinctus
ENSLBEG00000013105	-	87	57.812	ENSDORG00000005669	Rbm15	96	54.232	Dipodomys_ordii
ENSLBEG00000013105	-	86	57.422	ENSEASG00005005359	RBM15	92	54.120	Equus_asinus_asinus
ENSLBEG00000013105	-	86	57.422	ENSECAG00000023660	RBM15	92	54.120	Equus_caballus
ENSLBEG00000013105	-	100	66.505	ENSELUG00000014614	RBM15	96	66.505	Esox_lucius
ENSLBEG00000013105	-	100	58.053	ENSELUG00000016087	rbm15	94	59.375	Esox_lucius
ENSLBEG00000013105	-	86	57.161	ENSFCAG00000028208	RBM15	91	53.786	Felis_catus
ENSLBEG00000013105	-	66	56.915	ENSFALG00000003062	RBM15	99	63.284	Ficedula_albicollis
ENSLBEG00000013105	-	100	53.229	ENSFDAG00000020743	RBM15	92	53.898	Fukomys_damarensis
ENSLBEG00000013105	-	100	66.345	ENSFHEG00000005559	-	96	66.466	Fundulus_heteroclitus
ENSLBEG00000013105	-	100	61.111	ENSFHEG00000005024	rbm15	96	61.353	Fundulus_heteroclitus
ENSLBEG00000013105	-	64	66.792	ENSGMOG00000019941	rbm15	100	67.228	Gadus_morhua
ENSLBEG00000013105	-	86	54.648	ENSGALG00000000401	RBM15	97	52.340	Gallus_gallus
ENSLBEG00000013105	-	100	69.539	ENSGAFG00000021611	-	92	69.417	Gambusia_affinis
ENSLBEG00000013105	-	100	60.827	ENSGAFG00000001534	rbm15	95	60.462	Gambusia_affinis
ENSLBEG00000013105	-	100	77.245	ENSGACG00000001022	-	96	77.245	Gasterosteus_aculeatus
ENSLBEG00000013105	-	100	61.031	ENSGACG00000007932	rbm15	96	61.631	Gasterosteus_aculeatus
ENSLBEG00000013105	-	86	55.074	ENSGAGG00000012252	RBM15	97	53.469	Gopherus_agassizii
ENSLBEG00000013105	-	100	53.289	ENSGGOG00000003655	RBM15	90	53.958	Gorilla_gorilla
ENSLBEG00000013105	-	100	74.939	ENSHBUG00000003220	-	96	74.818	Haplochromis_burtoni
ENSLBEG00000013105	-	100	61.045	ENSHBUG00000022227	rbm15	96	61.045	Haplochromis_burtoni
ENSLBEG00000013105	-	86	57.422	ENSHGLG00000014811	RBM15	92	53.898	Heterocephalus_glaber_female
ENSLBEG00000013105	-	86	57.422	ENSHGLG00100017137	RBM15	92	53.898	Heterocephalus_glaber_male
ENSLBEG00000013105	-	100	63.995	ENSHCOG00000005229	RBM15	96	63.748	Hippocampus_comes
ENSLBEG00000013105	-	100	60.409	ENSHCOG00000004048	rbm15	96	60.048	Hippocampus_comes
ENSLBEG00000013105	-	100	61.593	ENSIPUG00000004415	RBM15	96	62.470	Ictalurus_punctatus
ENSLBEG00000013105	-	86	57.347	ENSSTOG00000026597	RBM15	92	53.898	Ictidomys_tridecemlineatus
ENSLBEG00000013105	-	86	57.812	ENSJJAG00000021795	Rbm15	92	53.718	Jaculus_jaculus
ENSLBEG00000013105	-	100	61.882	ENSKMAG00000017681	rbm15	96	61.945	Kryptolebias_marmoratus
ENSLBEG00000013105	-	100	64.964	ENSKMAG00000021291	-	95	65.207	Kryptolebias_marmoratus
ENSLBEG00000013105	-	100	59.928	ENSLACG00000018372	RBM15	96	59.737	Latimeria_chalumnae
ENSLBEG00000013105	-	100	64.429	ENSLOCG00000017940	rbm15	96	64.782	Lepisosteus_oculatus
ENSLBEG00000013105	-	86	57.763	ENSLAFG00000012897	RBM15	92	54.311	Loxodonta_africana
ENSLBEG00000013105	-	100	53.289	ENSMFAG00000029929	RBM15	91	53.958	Macaca_fascicularis
ENSLBEG00000013105	-	100	53.289	ENSMMUG00000015020	RBM15	91	53.958	Macaca_mulatta
ENSLBEG00000013105	-	100	53.289	ENSMNEG00000045235	RBM15	91	53.958	Macaca_nemestrina
ENSLBEG00000013105	-	100	53.289	ENSMLEG00000035727	RBM15	90	53.958	Mandrillus_leucophaeus
ENSLBEG00000013105	-	100	62.185	ENSMAMG00000010732	rbm15	96	62.545	Mastacembelus_armatus
ENSLBEG00000013105	-	100	75.060	ENSMAMG00000023921	-	100	74.458	Mastacembelus_armatus
ENSLBEG00000013105	-	100	61.098	ENSMZEG00005006595	rbm15	96	61.337	Maylandia_zebra
ENSLBEG00000013105	-	100	75.791	ENSMZEG00005010876	-	94	75.791	Maylandia_zebra
ENSLBEG00000013105	-	86	57.647	ENSMAUG00000007198	Rbm15	92	54.027	Mesocricetus_auratus
ENSLBEG00000013105	-	100	53.289	ENSMICG00000005255	RBM15	92	53.846	Microcebus_murinus
ENSLBEG00000013105	-	86	57.647	ENSMOCG00000013142	Rbm15	92	53.803	Microtus_ochrogaster
ENSLBEG00000013105	-	100	73.171	ENSMMOG00000021778	-	96	72.927	Mola_mola
ENSLBEG00000013105	-	100	61.853	ENSMMOG00000002357	rbm15	96	61.492	Mola_mola
ENSLBEG00000013105	-	100	72.317	ENSMALG00000017867	-	96	72.805	Monopterus_albus
ENSLBEG00000013105	-	100	61.751	ENSMALG00000019648	rbm15	96	62.110	Monopterus_albus
ENSLBEG00000013105	-	86	58.094	MGP_CAROLIEiJ_G0025501	Rbm15	92	53.966	Mus_caroli
ENSLBEG00000013105	-	86	58.094	ENSMUSG00000048109	Rbm15	92	53.966	Mus_musculus
ENSLBEG00000013105	-	86	58.094	MGP_PahariEiJ_G0026947	Rbm15	92	53.966	Mus_pahari
ENSLBEG00000013105	-	86	58.094	MGP_SPRETEiJ_G0026451	Rbm15	92	53.966	Mus_spretus
ENSLBEG00000013105	-	86	57.422	ENSMPUG00000003822	RBM15	91	54.009	Mustela_putorius_furo
ENSLBEG00000013105	-	86	57.292	ENSMLUG00000007169	RBM15	91	53.855	Myotis_lucifugus
ENSLBEG00000013105	-	86	57.161	ENSNGAG00000011394	Rbm15	92	53.675	Nannospalax_galili
ENSLBEG00000013105	-	100	61.045	ENSNBRG00000008870	rbm15	96	61.164	Neolamprologus_brichardi
ENSLBEG00000013105	-	100	75.304	ENSNBRG00000005460	-	96	75.304	Neolamprologus_brichardi
ENSLBEG00000013105	-	100	61.045	ENSNBRG00000003947	rbm15	96	61.164	Neolamprologus_brichardi
ENSLBEG00000013105	-	100	53.177	ENSNLEG00000003601	RBM15	90	53.846	Nomascus_leucogenys
ENSLBEG00000013105	-	86	59.181	ENSMEUG00000015940	RBM15	90	54.700	Notamacropus_eugenii
ENSLBEG00000013105	-	100	51.917	ENSODEG00000019343	RBM15	96	53.348	Octodon_degus
ENSLBEG00000013105	-	100	61.585	ENSONIG00000002532	rbm15	96	61.705	Oreochromis_niloticus
ENSLBEG00000013105	-	100	75.485	ENSONIG00000018955	-	100	75.485	Oreochromis_niloticus
ENSLBEG00000013105	-	86	57.292	ENSOCUG00000002434	RBM15	91	53.786	Oryctolagus_cuniculus
ENSLBEG00000013105	-	100	70.171	ENSORLG00000000433	-	96	70.574	Oryzias_latipes
ENSLBEG00000013105	-	100	61.669	ENSORLG00000006197	rbm15	96	62.031	Oryzias_latipes
ENSLBEG00000013105	-	100	69.485	ENSORLG00020008048	-	96	69.890	Oryzias_latipes_hni
ENSLBEG00000013105	-	100	61.669	ENSORLG00020011223	rbm15	96	62.031	Oryzias_latipes_hni
ENSLBEG00000013105	-	100	69.671	ENSORLG00015004063	-	96	69.465	Oryzias_latipes_hsok
ENSLBEG00000013105	-	100	61.548	ENSORLG00015003078	rbm15	96	61.911	Oryzias_latipes_hsok
ENSLBEG00000013105	-	100	66.990	ENSOMEG00000014662	-	96	67.718	Oryzias_melastigma
ENSLBEG00000013105	-	100	60.624	ENSOMEG00000020683	rbm15	96	61.345	Oryzias_melastigma
ENSLBEG00000013105	-	100	53.025	ENSOGAG00000009182	RBM15	97	53.889	Otolemur_garnettii
ENSLBEG00000013105	-	86	57.812	ENSOARG00000019430	RBM15	90	54.009	Ovis_aries
ENSLBEG00000013105	-	100	53.289	ENSPPAG00000041967	RBM15	90	53.958	Pan_paniscus
ENSLBEG00000013105	-	86	57.161	ENSPPRG00000013347	RBM15	91	53.786	Panthera_pardus
ENSLBEG00000013105	-	100	53.515	ENSPTIG00000010318	RBM15	91	53.941	Panthera_tigris_altaica
ENSLBEG00000013105	-	100	53.289	ENSPTRG00000001074	RBM15	91	53.958	Pan_troglodytes
ENSLBEG00000013105	-	100	53.289	ENSPANG00000020891	RBM15	91	53.958	Papio_anubis
ENSLBEG00000013105	-	100	65.291	ENSPKIG00000003067	-	96	64.806	Paramormyrops_kingsleyae
ENSLBEG00000013105	-	87	64.538	ENSPKIG00000013584	rbm15	96	60.991	Paramormyrops_kingsleyae
ENSLBEG00000013105	-	58	53.143	ENSPSIG00000001607	RBM15	94	53.346	Pelodiscus_sinensis
ENSLBEG00000013105	-	100	60.676	ENSPMGG00000016039	rbm15	96	60.434	Periophthalmus_magnuspinnatus
ENSLBEG00000013105	-	100	72.079	ENSPMGG00000017642	-	96	72.325	Periophthalmus_magnuspinnatus
ENSLBEG00000013105	-	86	58.060	ENSPEMG00000000014	Rbm15	92	54.036	Peromyscus_maniculatus_bairdii
ENSLBEG00000013105	-	86	59.371	ENSPCIG00000003458	RBM15	91	54.810	Phascolarctos_cinereus
ENSLBEG00000013105	-	100	59.613	ENSPFOG00000012754	rbm15	93	59.855	Poecilia_formosa
ENSLBEG00000013105	-	100	70.352	ENSPLAG00000015343	-	96	70.352	Poecilia_latipinna
ENSLBEG00000013105	-	100	60.701	ENSPLAG00000003560	rbm15	96	60.943	Poecilia_latipinna
ENSLBEG00000013105	-	100	60.580	ENSPMEG00000002049	rbm15	96	60.822	Poecilia_mexicana
ENSLBEG00000013105	-	100	70.352	ENSPMEG00000001923	-	96	70.352	Poecilia_mexicana
ENSLBEG00000013105	-	100	70.267	ENSPREG00000004167	-	96	70.267	Poecilia_reticulata
ENSLBEG00000013105	-	100	60.602	ENSPREG00000014581	rbm15	96	61.084	Poecilia_reticulata
ENSLBEG00000013105	-	100	53.177	ENSPPYG00000001051	RBM15	91	53.846	Pongo_abelii
ENSLBEG00000013105	-	66	43.934	ENSPPYG00000015734	-	95	43.750	Pongo_abelii
ENSLBEG00000013105	-	72	55.951	ENSPCAG00000006329	RBM15	65	56.636	Procavia_capensis
ENSLBEG00000013105	-	100	53.229	ENSPCOG00000019767	RBM15	91	53.786	Propithecus_coquereli
ENSLBEG00000013105	-	86	57.422	ENSPVAG00000007193	RBM15	90	54.009	Pteropus_vampyrus
ENSLBEG00000013105	-	100	75.547	ENSPNYG00000007434	-	96	75.547	Pundamilia_nyererei
ENSLBEG00000013105	-	100	60.473	ENSPNYG00000005143	rbm15	96	61.183	Pundamilia_nyererei
ENSLBEG00000013105	-	100	62.545	ENSPNAG00000007496	rbm15	96	63.539	Pygocentrus_nattereri
ENSLBEG00000013105	-	86	57.963	ENSRNOG00000047499	Rbm15	92	54.078	Rattus_norvegicus
ENSLBEG00000013105	-	100	53.512	ENSRBIG00000044261	RBM15	91	53.958	Rhinopithecus_bieti
ENSLBEG00000013105	-	100	53.512	ENSRROG00000045519	RBM15	91	53.958	Rhinopithecus_roxellana
ENSLBEG00000013105	-	100	53.341	ENSSBOG00000021394	RBM15	91	54.009	Saimiri_boliviensis_boliviensis
ENSLBEG00000013105	-	100	76.988	ENSSMAG00000000431	-	96	76.867	Scophthalmus_maximus
ENSLBEG00000013105	-	100	61.511	ENSSMAG00000019106	rbm15	96	61.483	Scophthalmus_maximus
ENSLBEG00000013105	-	100	61.178	ENSSDUG00000008769	rbm15	96	61.317	Seriola_dumerili
ENSLBEG00000013105	-	100	81.620	ENSSDUG00000009424	-	96	81.862	Seriola_dumerili
ENSLBEG00000013105	-	100	61.178	ENSSLDG00000002691	rbm15	96	61.317	Seriola_lalandi_dorsalis
ENSLBEG00000013105	-	100	81.741	ENSSLDG00000022441	-	96	82.104	Seriola_lalandi_dorsalis
ENSLBEG00000013105	-	87	53.761	ENSSARG00000000360	RBM15	78	55.286	Sorex_araneus
ENSLBEG00000013105	-	100	77.683	ENSSPAG00000007739	-	95	77.683	Stegastes_partitus
ENSLBEG00000013105	-	100	61.538	ENSSPAG00000004965	rbm15	96	62.019	Stegastes_partitus
ENSLBEG00000013105	-	86	57.607	ENSSSCG00000006809	RBM15	97	53.949	Sus_scrofa
ENSLBEG00000013105	-	65	55.556	ENSTGUG00000000886	RBM15	94	56.284	Taeniopygia_guttata
ENSLBEG00000013105	-	100	70.747	ENSTRUG00000007851	-	93	70.747	Takifugu_rubripes
ENSLBEG00000013105	-	100	61.205	ENSTRUG00000002921	rbm15	96	61.687	Takifugu_rubripes
ENSLBEG00000013105	-	100	59.952	ENSTNIG00000015129	rbm15	95	60.193	Tetraodon_nigroviridis
ENSLBEG00000013105	-	86	58.170	ENSTBEG00000008339	RBM15	90	54.413	Tupaia_belangeri
ENSLBEG00000013105	-	86	57.943	ENSTTRG00000001317	RBM15	90	54.120	Tursiops_truncatus
ENSLBEG00000013105	-	86	57.552	ENSUAMG00000017330	RBM15	92	54.120	Ursus_americanus
ENSLBEG00000013105	-	86	57.552	ENSUMAG00000013623	RBM15	91	54.120	Ursus_maritimus
ENSLBEG00000013105	-	100	53.444	ENSVVUG00000002929	RBM15	91	54.181	Vulpes_vulpes
ENSLBEG00000013105	-	100	52.751	ENSXETG00000002029	rbm15	96	52.392	Xenopus_tropicalis
ENSLBEG00000013105	-	100	70.874	ENSXCOG00000003003	-	96	70.874	Xiphophorus_couchianus
ENSLBEG00000013105	-	100	61.807	ENSXCOG00000006328	rbm15	96	61.446	Xiphophorus_couchianus
ENSLBEG00000013105	-	100	70.995	ENSXMAG00000009062	-	96	70.995	Xiphophorus_maculatus
ENSLBEG00000013105	-	100	61.807	ENSXMAG00000020192	rbm15	96	61.446	Xiphophorus_maculatus