EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000013115 (Gene tree)
Gene ID: 109986209
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 56204 bases
Position: chrFKLU01000093.1:620899-677102
Accession: 109986209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000016981	R3H	PF01424.22	1e-10	1	1
ENSLBEP00000017008	R3H	PF01424.22	1e-10	1	1
ENSLBEP00000017176	R3H	PF01424.22	1.1e-10	1	1
ENSLBEP00000017056	R3H	PF01424.22	1.1e-10	1	1
ENSLBEP00000017117	R3H	PF01424.22	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000018142	-	3568	XM_020636747	ENSLBEP00000017176	1067 (aa)	XP_020492403	-
ENSLBET00000017969	-	5375	XM_020636740	ENSLBEP00000017008	1097 (aa)	XP_020492396	-
ENSLBET00000018083	-	3667	-	ENSLBEP00000017117	1100 (aa)	-	-
ENSLBET00000017938	-	4861	XM_020636739	ENSLBEP00000016981	1097 (aa)	XP_020492395	-
ENSLBET00000018021	-	5321	XM_020636744	ENSLBEP00000017056	1079 (aa)	XP_020492400	-

Gene Model

Click here to download ENSLBEG00000013115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013115's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000013115	r3hdm2	96	64.008	ENSG00000179912	R3HDM2	100	61.549	Homo_sapiens
ENSLBEG00000013115	r3hdm2	54	38.278	ENSAPOG00000021873	-	50	46.903	Acanthochromis_polyacanthus
ENSLBEG00000013115	r3hdm2	96	94.635	ENSAPOG00000020341	r3hdm2	100	94.635	Acanthochromis_polyacanthus
ENSLBEG00000013115	r3hdm2	92	66.635	ENSAMEG00000004812	R3HDM2	99	64.620	Ailuropoda_melanoleuca
ENSLBEG00000013115	r3hdm2	90	85.204	ENSACIG00000016146	r3hdm2	98	84.490	Amphilophus_citrinellus
ENSLBEG00000013115	r3hdm2	96	94.542	ENSAOCG00000023694	r3hdm2	100	94.542	Amphiprion_ocellaris
ENSLBEG00000013115	r3hdm2	96	94.628	ENSAPEG00000008851	r3hdm2	100	94.628	Amphiprion_percula
ENSLBEG00000013115	r3hdm2	96	90.313	ENSATEG00000025024	r3hdm2	100	90.693	Anabas_testudineus
ENSLBEG00000013115	r3hdm2	96	72.397	ENSAPLG00000004298	R3HDM2	89	72.397	Anas_platyrhynchos
ENSLBEG00000013115	r3hdm2	96	61.431	ENSACAG00000006388	R3HDM2	99	59.963	Anolis_carolinensis
ENSLBEG00000013115	r3hdm2	96	63.973	ENSANAG00000025397	-	99	63.440	Aotus_nancymaae
ENSLBEG00000013115	r3hdm2	93	62.402	ENSANAG00000031310	-	98	60.542	Aotus_nancymaae
ENSLBEG00000013115	r3hdm2	96	93.497	ENSACLG00000019106	r3hdm2	100	93.025	Astatotilapia_calliptera
ENSLBEG00000013115	r3hdm2	91	68.781	ENSAMXG00000017180	r3hdm2	99	70.653	Astyanax_mexicanus
ENSLBEG00000013115	r3hdm2	92	65.377	ENSBTAG00000018361	R3HDM2	96	65.381	Bos_taurus
ENSLBEG00000013115	r3hdm2	96	64.034	ENSCJAG00000007365	R3HDM2	99	64.354	Callithrix_jacchus
ENSLBEG00000013115	r3hdm2	92	65.213	ENSCAFG00000000215	R3HDM2	95	65.411	Canis_familiaris
ENSLBEG00000013115	r3hdm2	92	67.118	ENSCAFG00020023713	R3HDM2	95	67.473	Canis_lupus_dingo
ENSLBEG00000013115	r3hdm2	92	67.189	ENSCHIG00000014022	R3HDM2	96	67.412	Capra_hircus
ENSLBEG00000013115	r3hdm2	96	63.429	ENSTSYG00000001449	R3HDM2	99	63.905	Carlito_syrichta
ENSLBEG00000013115	r3hdm2	92	68.177	ENSCPOG00000009217	R3HDM2	99	65.770	Cavia_porcellus
ENSLBEG00000013115	r3hdm2	84	64.783	ENSCCAG00000026083	R3HDM2	95	66.743	Cebus_capucinus
ENSLBEG00000013115	r3hdm2	96	65.140	ENSCATG00000036929	R3HDM2	96	67.089	Cercocebus_atys
ENSLBEG00000013115	r3hdm2	92	67.339	ENSCLAG00000011997	R3HDM2	99	65.434	Chinchilla_lanigera
ENSLBEG00000013115	r3hdm2	96	65.514	ENSCSAG00000004911	R3HDM2	96	67.478	Chlorocebus_sabaeus
ENSLBEG00000013115	r3hdm2	70	65.000	ENSCHOG00000005636	R3HDM2	89	65.932	Choloepus_hoffmanni
ENSLBEG00000013115	r3hdm2	92	65.341	ENSCPBG00000013922	R3HDM2	99	62.818	Chrysemys_picta_bellii
ENSLBEG00000013115	r3hdm2	96	65.075	ENSCANG00000043807	R3HDM2	96	67.154	Colobus_angolensis_palliatus
ENSLBEG00000013115	r3hdm2	96	63.963	ENSCGRG00001017324	R3hdm2	99	62.523	Cricetulus_griseus_chok1gshd
ENSLBEG00000013115	r3hdm2	96	63.963	ENSCGRG00000003862	R3hdm2	99	62.523	Cricetulus_griseus_crigri
ENSLBEG00000013115	r3hdm2	96	91.837	ENSCSEG00000010925	r3hdm2	99	92.887	Cynoglossus_semilaevis
ENSLBEG00000013115	r3hdm2	96	89.046	ENSCVAG00000009058	r3hdm2	100	89.245	Cyprinodon_variegatus
ENSLBEG00000013115	r3hdm2	90	72.189	ENSDARG00000102610	r3hdm2	99	73.900	Danio_rerio
ENSLBEG00000013115	r3hdm2	97	64.015	ENSDNOG00000015033	R3HDM2	100	66.215	Dasypus_novemcinctus
ENSLBEG00000013115	r3hdm2	92	62.090	ENSDORG00000011462	R3hdm2	99	62.425	Dipodomys_ordii
ENSLBEG00000013115	r3hdm2	92	67.212	ENSEASG00005007091	R3HDM2	97	66.825	Equus_asinus_asinus
ENSLBEG00000013115	r3hdm2	92	67.246	ENSECAG00000003157	R3HDM2	96	67.370	Equus_caballus
ENSLBEG00000013115	r3hdm2	96	79.230	ENSELUG00000015969	r3hdm2	100	78.571	Esox_lucius
ENSLBEG00000013115	r3hdm2	99	63.499	ENSFCAG00000000192	R3HDM2	99	63.628	Felis_catus
ENSLBEG00000013115	r3hdm2	78	63.194	ENSFALG00000000255	R3HDM2	99	60.367	Ficedula_albicollis
ENSLBEG00000013115	r3hdm2	92	66.955	ENSFDAG00000019385	R3HDM2	99	64.852	Fukomys_damarensis
ENSLBEG00000013115	r3hdm2	96	90.538	ENSFHEG00000016484	r3hdm2	100	90.892	Fundulus_heteroclitus
ENSLBEG00000013115	r3hdm2	92	82.341	ENSGMOG00000007961	r3hdm2	100	82.765	Gadus_morhua
ENSLBEG00000013115	r3hdm2	96	64.554	ENSGALG00000043736	R3HDM2	99	63.269	Gallus_gallus
ENSLBEG00000013115	r3hdm2	99	89.250	ENSGAFG00000013887	r3hdm2	100	90.463	Gambusia_affinis
ENSLBEG00000013115	r3hdm2	92	90.838	ENSGACG00000006442	r3hdm2	100	90.750	Gasterosteus_aculeatus
ENSLBEG00000013115	r3hdm2	92	64.562	ENSGAGG00000017797	R3HDM2	99	61.696	Gopherus_agassizii
ENSLBEG00000013115	r3hdm2	96	65.047	ENSGGOG00000015007	R3HDM2	96	66.991	Gorilla_gorilla
ENSLBEG00000013115	r3hdm2	92	67.243	ENSHGLG00000010434	-	99	65.310	Heterocephalus_glaber_female
ENSLBEG00000013115	r3hdm2	86	59.915	ENSHGLG00000010421	-	97	58.581	Heterocephalus_glaber_female
ENSLBEG00000013115	r3hdm2	92	57.627	ENSHGLG00100018871	-	98	56.800	Heterocephalus_glaber_male
ENSLBEG00000013115	r3hdm2	92	67.147	ENSHGLG00100004183	-	99	65.217	Heterocephalus_glaber_male
ENSLBEG00000013115	r3hdm2	99	89.527	ENSHCOG00000001142	r3hdm2	100	89.249	Hippocampus_comes
ENSLBEG00000013115	r3hdm2	96	74.816	ENSIPUG00000023873	r3hdm2	100	74.885	Ictalurus_punctatus
ENSLBEG00000013115	r3hdm2	96	59.372	ENSSTOG00000013424	R3HDM2	99	58.475	Ictidomys_tridecemlineatus
ENSLBEG00000013115	r3hdm2	96	64.312	ENSJJAG00000010001	R3hdm2	99	64.510	Jaculus_jaculus
ENSLBEG00000013115	r3hdm2	97	91.439	ENSKMAG00000012695	r3hdm2	98	91.513	Kryptolebias_marmoratus
ENSLBEG00000013115	r3hdm2	92	66.731	ENSLACG00000019064	r3hdm2	100	64.854	Latimeria_chalumnae
ENSLBEG00000013115	r3hdm2	96	73.270	ENSLOCG00000005976	r3hdm2	99	73.529	Lepisosteus_oculatus
ENSLBEG00000013115	r3hdm2	96	65.831	ENSLAFG00000006510	R3HDM2	99	65.985	Loxodonta_africana
ENSLBEG00000013115	r3hdm2	96	65.144	ENSMFAG00000036385	R3HDM2	96	67.218	Macaca_fascicularis
ENSLBEG00000013115	r3hdm2	96	65.685	ENSMMUG00000021789	R3HDM2	96	67.754	Macaca_mulatta
ENSLBEG00000013115	r3hdm2	96	65.144	ENSMNEG00000025314	R3HDM2	96	67.153	Macaca_nemestrina
ENSLBEG00000013115	r3hdm2	96	65.234	ENSMLEG00000028915	R3HDM2	96	67.186	Mandrillus_leucophaeus
ENSLBEG00000013115	r3hdm2	96	92.251	ENSMAMG00000009793	r3hdm2	100	93.327	Mastacembelus_armatus
ENSLBEG00000013115	r3hdm2	96	93.049	ENSMZEG00005007319	r3hdm2	100	92.586	Maylandia_zebra
ENSLBEG00000013115	r3hdm2	92	64.892	ENSMICG00000012389	R3HDM2	96	64.995	Microcebus_murinus
ENSLBEG00000013115	r3hdm2	96	64.516	ENSMOCG00000014425	R3hdm2	99	63.000	Microtus_ochrogaster
ENSLBEG00000013115	r3hdm2	92	84.231	ENSMMOG00000007448	r3hdm2	99	84.242	Mola_mola
ENSLBEG00000013115	r3hdm2	88	87.566	ENSMALG00000010211	r3hdm2	98	86.765	Monopterus_albus
ENSLBEG00000013115	r3hdm2	93	66.189	MGP_CAROLIEiJ_G0015896	R3hdm2	99	64.641	Mus_caroli
ENSLBEG00000013115	r3hdm2	96	64.977	ENSMUSG00000025404	R3hdm2	99	64.793	Mus_musculus
ENSLBEG00000013115	r3hdm2	92	66.473	MGP_PahariEiJ_G0031189	R3hdm2	99	64.510	Mus_pahari
ENSLBEG00000013115	r3hdm2	96	64.857	MGP_SPRETEiJ_G0016722	R3hdm2	99	64.673	Mus_spretus
ENSLBEG00000013115	r3hdm2	91	66.049	ENSMPUG00000001818	R3HDM2	97	64.041	Mustela_putorius_furo
ENSLBEG00000013115	r3hdm2	92	67.212	ENSMLUG00000004980	R3HDM2	96	66.826	Myotis_lucifugus
ENSLBEG00000013115	r3hdm2	96	65.181	ENSNGAG00000018800	R3hdm2	95	67.246	Nannospalax_galili
ENSLBEG00000013115	r3hdm2	91	83.984	ENSNBRG00000004483	r3hdm2	100	83.784	Neolamprologus_brichardi
ENSLBEG00000013115	r3hdm2	96	65.201	ENSNLEG00000017351	R3HDM2	96	67.154	Nomascus_leucogenys
ENSLBEG00000013115	r3hdm2	96	56.627	ENSMEUG00000008588	R3HDM2	99	55.741	Notamacropus_eugenii
ENSLBEG00000013115	r3hdm2	96	57.920	ENSOPRG00000013670	R3HDM2	99	57.156	Ochotona_princeps
ENSLBEG00000013115	r3hdm2	96	89.016	ENSONIG00000005075	r3hdm2	100	88.190	Oreochromis_niloticus
ENSLBEG00000013115	r3hdm2	96	65.622	ENSOCUG00000013258	R3HDM2	99	65.530	Oryctolagus_cuniculus
ENSLBEG00000013115	r3hdm2	96	89.963	ENSORLG00000005502	r3hdm2	100	90.056	Oryzias_latipes
ENSLBEG00000013115	r3hdm2	96	89.870	ENSORLG00020017069	r3hdm2	100	89.963	Oryzias_latipes_hni
ENSLBEG00000013115	r3hdm2	96	89.963	ENSORLG00015012735	r3hdm2	100	90.056	Oryzias_latipes_hsok
ENSLBEG00000013115	r3hdm2	97	80.095	ENSOMEG00000018079	r3hdm2	100	80.875	Oryzias_melastigma
ENSLBEG00000013115	r3hdm2	88	58.775	ENSOGAG00000027966	-	94	57.944	Otolemur_garnettii
ENSLBEG00000013115	r3hdm2	92	64.167	ENSOGAG00000012055	R3HDM2	96	64.466	Otolemur_garnettii
ENSLBEG00000013115	r3hdm2	92	65.347	ENSOARG00000006929	R3HDM2	96	65.779	Ovis_aries
ENSLBEG00000013115	r3hdm2	96	65.234	ENSPPAG00000034395	R3HDM2	96	67.186	Pan_paniscus
ENSLBEG00000013115	r3hdm2	92	64.817	ENSPPRG00000009240	R3HDM2	96	64.244	Panthera_pardus
ENSLBEG00000013115	r3hdm2	92	64.817	ENSPTIG00000008752	R3HDM2	96	64.244	Panthera_tigris_altaica
ENSLBEG00000013115	r3hdm2	96	65.144	ENSPTRG00000046457	R3HDM2	96	67.218	Pan_troglodytes
ENSLBEG00000013115	r3hdm2	92	65.613	ENSPANG00000024002	R3HDM2	99	65.524	Papio_anubis
ENSLBEG00000013115	r3hdm2	96	78.799	ENSPKIG00000003171	r3hdm2	100	79.925	Paramormyrops_kingsleyae
ENSLBEG00000013115	r3hdm2	61	54.491	ENSPSIG00000006954	R3HDM2	99	53.130	Pelodiscus_sinensis
ENSLBEG00000013115	r3hdm2	90	84.474	ENSPMGG00000007061	r3hdm2	99	83.571	Periophthalmus_magnuspinnatus
ENSLBEG00000013115	r3hdm2	96	64.597	ENSPEMG00000015964	R3hdm2	99	64.345	Peromyscus_maniculatus_bairdii
ENSLBEG00000013115	r3hdm2	96	63.394	ENSPCIG00000023841	R3HDM2	99	62.607	Phascolarctos_cinereus
ENSLBEG00000013115	r3hdm2	90	90.196	ENSPFOG00000006077	r3hdm2	88	90.625	Poecilia_formosa
ENSLBEG00000013115	r3hdm2	96	90.368	ENSPLAG00000002971	r3hdm2	100	90.660	Poecilia_latipinna
ENSLBEG00000013115	r3hdm2	96	90.368	ENSPMEG00000005330	r3hdm2	100	90.660	Poecilia_mexicana
ENSLBEG00000013115	r3hdm2	96	90.251	ENSPREG00000008424	r3hdm2	100	90.538	Poecilia_reticulata
ENSLBEG00000013115	r3hdm2	94	57.975	ENSPPYG00000004685	R3HDM2	77	60.242	Pongo_abelii
ENSLBEG00000013115	r3hdm2	85	79.152	ENSPCAG00000014642	R3HDM2	90	80.212	Procavia_capensis
ENSLBEG00000013115	r3hdm2	92	65.119	ENSPCOG00000013201	R3HDM2	96	65.252	Propithecus_coquereli
ENSLBEG00000013115	r3hdm2	92	67.276	ENSPVAG00000003967	R3HDM2	97	66.730	Pteropus_vampyrus
ENSLBEG00000013115	r3hdm2	91	83.939	ENSPNYG00000013479	r3hdm2	100	82.929	Pundamilia_nyererei
ENSLBEG00000013115	r3hdm2	96	74.728	ENSPNAG00000017473	r3hdm2	100	76.812	Pygocentrus_nattereri
ENSLBEG00000013115	r3hdm2	92	65.865	ENSRNOG00000007801	R3hdm2	99	63.937	Rattus_norvegicus
ENSLBEG00000013115	r3hdm2	96	62.072	ENSRBIG00000037403	R3HDM2	96	63.933	Rhinopithecus_bieti
ENSLBEG00000013115	r3hdm2	99	64.330	ENSRROG00000022271	R3HDM2	99	64.508	Rhinopithecus_roxellana
ENSLBEG00000013115	r3hdm2	96	63.939	ENSSBOG00000023547	R3HDM2	99	63.534	Saimiri_boliviensis_boliviensis
ENSLBEG00000013115	r3hdm2	96	62.569	ENSSHAG00000003511	R3HDM2	99	63.124	Sarcophilus_harrisii
ENSLBEG00000013115	r3hdm2	96	94.732	ENSSMAG00000012073	r3hdm2	100	95.189	Scophthalmus_maximus
ENSLBEG00000013115	r3hdm2	96	93.227	ENSSDUG00000019269	r3hdm2	100	94.262	Seriola_dumerili
ENSLBEG00000013115	r3hdm2	96	94.439	ENSSLDG00000005252	r3hdm2	100	94.439	Seriola_lalandi_dorsalis
ENSLBEG00000013115	r3hdm2	88	61.446	ENSSARG00000003958	R3HDM2	80	70.044	Sorex_araneus
ENSLBEG00000013115	r3hdm2	92	61.932	ENSSPUG00000014132	R3HDM2	99	58.829	Sphenodon_punctatus
ENSLBEG00000013115	r3hdm2	96	94.450	ENSSPAG00000022594	r3hdm2	100	94.450	Stegastes_partitus
ENSLBEG00000013115	r3hdm2	92	65.575	ENSSSCG00000026498	R3HDM2	100	66.739	Sus_scrofa
ENSLBEG00000013115	r3hdm2	69	64.005	ENSTGUG00000015881	R3HDM2	99	62.723	Taeniopygia_guttata
ENSLBEG00000013115	r3hdm2	92	84.163	ENSTRUG00000015075	r3hdm2	99	82.406	Takifugu_rubripes
ENSLBEG00000013115	r3hdm2	87	95.330	ENSTNIG00000007057	r3hdm2	89	95.556	Tetraodon_nigroviridis
ENSLBEG00000013115	r3hdm2	76	64.983	ENSTBEG00000015967	R3HDM2	75	65.657	Tupaia_belangeri
ENSLBEG00000013115	r3hdm2	89	68.779	ENSTTRG00000013082	R3HDM2	94	62.827	Tursiops_truncatus
ENSLBEG00000013115	r3hdm2	92	67.026	ENSUAMG00000020913	R3HDM2	99	64.799	Ursus_americanus
ENSLBEG00000013115	r3hdm2	89	65.768	ENSUMAG00000019179	R3HDM2	96	65.181	Ursus_maritimus
ENSLBEG00000013115	r3hdm2	87	79.032	ENSVPAG00000008656	R3HDM2	87	80.068	Vicugna_pacos
ENSLBEG00000013115	r3hdm2	90	66.798	ENSVVUG00000018014	R3HDM2	92	66.535	Vulpes_vulpes
ENSLBEG00000013115	r3hdm2	92	62.991	ENSXETG00000017153	r3hdm2	96	60.840	Xenopus_tropicalis
ENSLBEG00000013115	r3hdm2	84	84.118	ENSXCOG00000013882	r3hdm2	100	84.464	Xiphophorus_couchianus
ENSLBEG00000013115	r3hdm2	99	89.221	ENSXMAG00000017978	r3hdm2	100	90.724	Xiphophorus_maculatus