EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000013122 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 4285 bases
Position: chrFKLU01005942.1:3611-7895
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000017017	HGTP_anticodon	PF03129.20	3.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000017978	-	1131	-	ENSLBEP00000017017	376 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000013122's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013122's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000013122	-	100	81.443	ENSLBEG00000019228	gars	52	81.443
ENSLBEG00000013122	-	100	96.649	ENSLBEG00000019179	gars	57	96.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000013122	-	100	77.320	ENSG00000106105	GARS	92	71.831	Homo_sapiens
ENSLBEG00000013122	-	100	82.732	ENSAPOG00000019999	gars	52	82.732	Acanthochromis_polyacanthus
ENSLBEG00000013122	-	100	81.795	ENSAPOG00000020089	gars	57	81.795	Acanthochromis_polyacanthus
ENSLBEG00000013122	-	100	79.897	ENSAMEG00000006652	GARS	53	79.897	Ailuropoda_melanoleuca
ENSLBEG00000013122	-	100	84.715	ENSACIG00000020797	gars	57	84.715	Amphilophus_citrinellus
ENSLBEG00000013122	-	100	83.247	ENSACIG00000020744	gars	52	83.247	Amphilophus_citrinellus
ENSLBEG00000013122	-	100	85.825	ENSAOCG00000002479	gars	76	85.825	Amphiprion_ocellaris
ENSLBEG00000013122	-	100	82.990	ENSAOCG00000009108	gars	52	82.990	Amphiprion_ocellaris
ENSLBEG00000013122	-	100	82.732	ENSAPEG00000018850	gars	52	82.732	Amphiprion_percula
ENSLBEG00000013122	-	100	84.103	ENSAPEG00000018903	gars	58	84.103	Amphiprion_percula
ENSLBEG00000013122	-	100	82.216	ENSATEG00000008784	gars	59	82.216	Anabas_testudineus
ENSLBEG00000013122	-	100	78.093	ENSACAG00000005601	GARS	56	78.093	Anolis_carolinensis
ENSLBEG00000013122	-	100	78.701	ENSANAG00000022536	GARS	57	78.093	Aotus_nancymaae
ENSLBEG00000013122	-	100	83.548	ENSACLG00000027158	gars	57	83.548	Astatotilapia_calliptera
ENSLBEG00000013122	-	100	81.701	ENSACLG00000027174	gars	52	81.701	Astatotilapia_calliptera
ENSLBEG00000013122	-	100	83.511	ENSAMXG00000014895	gars	62	81.701	Astyanax_mexicanus
ENSLBEG00000013122	-	100	77.577	ENSBTAG00000018972	GARS	53	77.577	Bos_taurus
ENSLBEG00000013122	-	98	49.081	WBGene00001744	gars-1	56	49.081	Caenorhabditis_elegans
ENSLBEG00000013122	-	100	78.961	ENSCJAG00000008595	GARS	53	78.961	Callithrix_jacchus
ENSLBEG00000013122	-	99	79.070	ENSCAFG00020004272	GARS	56	79.070	Canis_lupus_dingo
ENSLBEG00000013122	-	100	77.577	ENSCHIG00000016912	GARS	63	77.577	Capra_hircus
ENSLBEG00000013122	-	100	79.124	ENSTSYG00000008538	GARS	53	79.124	Carlito_syrichta
ENSLBEG00000013122	-	100	70.000	ENSCAPG00000007526	GARS	65	70.000	Cavia_aperea
ENSLBEG00000013122	-	100	78.701	ENSCPOG00000007547	GARS	53	78.701	Cavia_porcellus
ENSLBEG00000013122	-	100	78.351	ENSCCAG00000011512	GARS	53	78.351	Cebus_capucinus
ENSLBEG00000013122	-	100	78.093	ENSCATG00000036699	GARS	53	78.093	Cercocebus_atys
ENSLBEG00000013122	-	100	78.351	ENSCLAG00000007985	GARS	54	78.351	Chinchilla_lanigera
ENSLBEG00000013122	-	100	78.093	ENSCSAG00000014588	GARS	53	78.093	Chlorocebus_sabaeus
ENSLBEG00000013122	-	100	71.649	ENSCHOG00000003253	GARS	55	71.649	Choloepus_hoffmanni
ENSLBEG00000013122	-	100	79.639	ENSCPBG00000019482	GARS	53	79.639	Chrysemys_picta_bellii
ENSLBEG00000013122	-	98	55.352	ENSCING00000008937	-	57	55.352	Ciona_intestinalis
ENSLBEG00000013122	-	100	78.093	ENSCANG00000027727	GARS	53	78.093	Colobus_angolensis_palliatus
ENSLBEG00000013122	-	100	78.961	ENSCGRG00001020450	Gars	53	78.961	Cricetulus_griseus_chok1gshd
ENSLBEG00000013122	-	100	78.351	ENSCGRG00000008342	Gars	55	78.351	Cricetulus_griseus_crigri
ENSLBEG00000013122	-	100	85.090	ENSCSEG00000017654	gars	60	85.090	Cynoglossus_semilaevis
ENSLBEG00000013122	-	100	82.216	ENSCSEG00000017671	gars	52	82.216	Cynoglossus_semilaevis
ENSLBEG00000013122	-	100	81.959	ENSCVAG00000007149	gars	52	81.959	Cyprinodon_variegatus
ENSLBEG00000013122	-	100	82.216	ENSDARG00000059070	gars	56	82.216	Danio_rerio
ENSLBEG00000013122	-	100	79.897	ENSDNOG00000046478	GARS	59	79.897	Dasypus_novemcinctus
ENSLBEG00000013122	-	100	79.528	ENSDORG00000002672	Gars	53	79.528	Dipodomys_ordii
ENSLBEG00000013122	-	99	53.747	FBgn0027088	GlyRS	57	53.747	Drosophila_melanogaster
ENSLBEG00000013122	-	99	73.643	ENSETEG00000012196	GARS	60	73.643	Echinops_telfairi
ENSLBEG00000013122	-	100	78.866	ENSEASG00005000388	GARS	53	78.866	Equus_asinus_asinus
ENSLBEG00000013122	-	100	79.124	ENSECAG00000019373	GARS	56	79.124	Equus_caballus
ENSLBEG00000013122	-	100	80.928	ENSELUG00000003692	gars	52	80.928	Esox_lucius
ENSLBEG00000013122	-	100	75.773	ENSFALG00000006550	GARS	63	75.773	Ficedula_albicollis
ENSLBEG00000013122	-	100	78.093	ENSFDAG00000014466	GARS	58	78.093	Fukomys_damarensis
ENSLBEG00000013122	-	100	82.216	ENSFHEG00000013189	gars	52	82.216	Fundulus_heteroclitus
ENSLBEG00000013122	-	90	80.627	ENSGMOG00000008856	-	56	80.627	Gadus_morhua
ENSLBEG00000013122	-	100	77.577	ENSGMOG00000010728	gars	52	77.577	Gadus_morhua
ENSLBEG00000013122	-	100	77.778	ENSGALG00000005694	GARS	57	77.577	Gallus_gallus
ENSLBEG00000013122	-	100	81.443	ENSGAFG00000005228	gars	52	81.443	Gambusia_affinis
ENSLBEG00000013122	-	100	79.124	ENSGACG00000003410	gars	52	79.124	Gasterosteus_aculeatus
ENSLBEG00000013122	-	100	79.381	ENSGAGG00000017755	GARS	62	79.381	Gopherus_agassizii
ENSLBEG00000013122	-	100	77.577	ENSGGOG00000004916	GARS	53	77.577	Gorilla_gorilla
ENSLBEG00000013122	-	100	81.701	ENSHBUG00000016481	gars	52	81.701	Haplochromis_burtoni
ENSLBEG00000013122	-	100	83.033	ENSHBUG00000000815	gars	57	83.033	Haplochromis_burtoni
ENSLBEG00000013122	-	100	78.608	ENSHGLG00000016342	GARS	52	78.608	Heterocephalus_glaber_female
ENSLBEG00000013122	-	100	79.221	ENSHGLG00100006787	GARS	55	79.221	Heterocephalus_glaber_male
ENSLBEG00000013122	-	97	73.077	ENSHCOG00000005286	gars	96	73.077	Hippocampus_comes
ENSLBEG00000013122	-	100	77.577	ENSHCOG00000005261	gars	57	77.577	Hippocampus_comes
ENSLBEG00000013122	-	100	78.989	ENSIPUG00000011443	gars	50	78.989	Ictalurus_punctatus
ENSLBEG00000013122	-	100	77.468	ENSSTOG00000015493	GARS	52	77.468	Ictidomys_tridecemlineatus
ENSLBEG00000013122	-	100	77.835	ENSJJAG00000022474	Gars	56	77.835	Jaculus_jaculus
ENSLBEG00000013122	-	100	81.186	ENSKMAG00000010428	gars	52	81.186	Kryptolebias_marmoratus
ENSLBEG00000013122	-	100	79.124	ENSLACG00000002810	GARS	75	79.124	Latimeria_chalumnae
ENSLBEG00000013122	-	100	82.990	ENSLOCG00000009688	gars	52	82.990	Lepisosteus_oculatus
ENSLBEG00000013122	-	100	78.608	ENSLAFG00000002496	GARS	56	78.205	Loxodonta_africana
ENSLBEG00000013122	-	100	78.093	ENSMFAG00000038863	GARS	53	78.093	Macaca_fascicularis
ENSLBEG00000013122	-	100	78.093	ENSMMUG00000004719	GARS	53	78.093	Macaca_mulatta
ENSLBEG00000013122	-	100	66.495	ENSMNEG00000043203	GARS	51	66.495	Macaca_nemestrina
ENSLBEG00000013122	-	100	78.351	ENSMLEG00000044430	GARS	53	78.351	Mandrillus_leucophaeus
ENSLBEG00000013122	-	100	82.216	ENSMAMG00000001894	gars	58	82.005	Mastacembelus_armatus
ENSLBEG00000013122	-	100	81.701	ENSMZEG00005019740	gars	52	81.701	Maylandia_zebra
ENSLBEG00000013122	-	100	83.505	ENSMZEG00005019754	gars	57	83.505	Maylandia_zebra
ENSLBEG00000013122	-	100	77.577	ENSMGAG00000003162	GARS	52	77.577	Meleagris_gallopavo
ENSLBEG00000013122	-	100	78.093	ENSMAUG00000016852	Gars	53	78.093	Mesocricetus_auratus
ENSLBEG00000013122	-	100	79.639	ENSMICG00000046006	GARS	57	79.639	Microcebus_murinus
ENSLBEG00000013122	-	100	78.093	ENSMOCG00000017680	Gars	53	78.093	Microtus_ochrogaster
ENSLBEG00000013122	-	100	79.028	ENSMMOG00000009695	gars	52	79.028	Mola_mola
ENSLBEG00000013122	-	87	74.852	ENSMODG00000021163	-	99	74.852	Monodelphis_domestica
ENSLBEG00000013122	-	100	78.093	MGP_CAROLIEiJ_G0028410	Gars	53	78.093	Mus_caroli
ENSLBEG00000013122	-	100	78.093	ENSMUSG00000029777	Gars	53	78.093	Mus_musculus
ENSLBEG00000013122	-	100	77.577	MGP_PahariEiJ_G0022160	Gars	53	77.577	Mus_pahari
ENSLBEG00000013122	-	100	78.093	MGP_SPRETEiJ_G0029412	Gars	59	82.178	Mus_spretus
ENSLBEG00000013122	-	100	79.639	ENSMPUG00000005116	GARS	53	79.639	Mustela_putorius_furo
ENSLBEG00000013122	-	100	79.124	ENSMLUG00000002043	GARS	53	79.124	Myotis_lucifugus
ENSLBEG00000013122	-	100	78.093	ENSNGAG00000021844	Gars	53	78.093	Nannospalax_galili
ENSLBEG00000013122	-	100	81.701	ENSNBRG00000018585	gars	52	81.701	Neolamprologus_brichardi
ENSLBEG00000013122	-	100	83.290	ENSNBRG00000018643	gars	100	83.290	Neolamprologus_brichardi
ENSLBEG00000013122	-	100	78.093	ENSNLEG00000015152	GARS	53	78.093	Nomascus_leucogenys
ENSLBEG00000013122	-	100	76.031	ENSMEUG00000001741	GARS	58	76.031	Notamacropus_eugenii
ENSLBEG00000013122	-	100	76.336	ENSODEG00000008246	GARS	50	76.336	Octodon_degus
ENSLBEG00000013122	-	98	73.368	ENSOANG00000006262	GARS	52	73.368	Ornithorhynchus_anatinus
ENSLBEG00000013122	-	100	78.608	ENSOCUG00000005295	GARS	57	78.608	Oryctolagus_cuniculus
ENSLBEG00000013122	-	100	81.538	ENSORLG00000009470	gars	52	81.538	Oryzias_latipes
ENSLBEG00000013122	-	100	80.964	ENSORLG00020013036	gars	99	80.964	Oryzias_latipes_hni
ENSLBEG00000013122	-	100	82.216	ENSORLG00015012886	gars	52	82.216	Oryzias_latipes_hsok
ENSLBEG00000013122	-	100	73.590	ENSOMEG00000000133	gars	99	73.590	Oryzias_melastigma
ENSLBEG00000013122	-	100	79.381	ENSOGAG00000013321	GARS	53	79.381	Otolemur_garnettii
ENSLBEG00000013122	-	100	77.577	ENSOARG00000008017	GARS	53	77.577	Ovis_aries
ENSLBEG00000013122	-	100	77.835	ENSPPAG00000037266	GARS	53	77.835	Pan_paniscus
ENSLBEG00000013122	-	100	79.124	ENSPPRG00000001917	GARS	53	79.124	Panthera_pardus
ENSLBEG00000013122	-	100	79.124	ENSPTIG00000016096	GARS	57	79.124	Panthera_tigris_altaica
ENSLBEG00000013122	-	100	78.442	ENSPTRG00000019042	GARS	55	78.442	Pan_troglodytes
ENSLBEG00000013122	-	100	78.351	ENSPANG00000026231	GARS	53	78.351	Papio_anubis
ENSLBEG00000013122	-	100	81.186	ENSPKIG00000014863	gars	50	81.186	Paramormyrops_kingsleyae
ENSLBEG00000013122	-	100	78.866	ENSPSIG00000010935	GARS	62	78.866	Pelodiscus_sinensis
ENSLBEG00000013122	-	100	81.980	ENSPMGG00000023648	gars	99	81.980	Periophthalmus_magnuspinnatus
ENSLBEG00000013122	-	99	76.826	ENSPMGG00000023644	gars	52	76.826	Periophthalmus_magnuspinnatus
ENSLBEG00000013122	-	100	78.093	ENSPEMG00000019930	Gars	58	78.093	Peromyscus_maniculatus_bairdii
ENSLBEG00000013122	-	100	67.949	ENSPMAG00000006586	gars	55	67.949	Petromyzon_marinus
ENSLBEG00000013122	-	100	75.000	ENSPCIG00000017010	GARS	53	75.000	Phascolarctos_cinereus
ENSLBEG00000013122	-	100	81.701	ENSPFOG00000004593	gars	52	81.701	Poecilia_formosa
ENSLBEG00000013122	-	100	81.443	ENSPLAG00000008038	gars	52	81.443	Poecilia_latipinna
ENSLBEG00000013122	-	100	81.701	ENSPMEG00000005901	gars	52	81.701	Poecilia_mexicana
ENSLBEG00000013122	-	100	81.959	ENSPREG00000020960	gars	50	81.959	Poecilia_reticulata
ENSLBEG00000013122	-	100	78.295	ENSPPYG00000017673	GARS	53	78.295	Pongo_abelii
ENSLBEG00000013122	-	100	76.546	ENSPCAG00000007199	GARS	52	76.546	Procavia_capensis
ENSLBEG00000013122	-	100	79.124	ENSPCOG00000008887	GARS	54	79.124	Propithecus_coquereli
ENSLBEG00000013122	-	100	78.093	ENSPVAG00000013565	GARS	53	78.093	Pteropus_vampyrus
ENSLBEG00000013122	-	100	83.033	ENSPNYG00000004960	gars	57	83.033	Pundamilia_nyererei
ENSLBEG00000013122	-	100	81.443	ENSPNYG00000005017	gars	52	81.443	Pundamilia_nyererei
ENSLBEG00000013122	-	100	80.670	ENSPNAG00000020164	gars	52	80.670	Pygocentrus_nattereri
ENSLBEG00000013122	-	100	78.351	ENSRNOG00000011052	Gars	53	78.351	Rattus_norvegicus
ENSLBEG00000013122	-	100	78.701	ENSRBIG00000040287	GARS	53	78.701	Rhinopithecus_bieti
ENSLBEG00000013122	-	100	78.093	ENSRROG00000044600	GARS	53	78.093	Rhinopithecus_roxellana
ENSLBEG00000013122	-	100	43.478	YBR121C	GRS1	58	43.478	Saccharomyces_cerevisiae
ENSLBEG00000013122	-	90	46.724	YPR081C	-	56	46.724	Saccharomyces_cerevisiae
ENSLBEG00000013122	-	100	77.577	ENSSBOG00000022287	GARS	53	77.577	Saimiri_boliviensis_boliviensis
ENSLBEG00000013122	-	100	76.031	ENSSHAG00000003419	GARS	57	76.031	Sarcophilus_harrisii
ENSLBEG00000013122	-	100	80.670	ENSSFOG00015000573	gars	51	80.670	Scleropages_formosus
ENSLBEG00000013122	-	100	81.443	ENSSMAG00000013672	gars	52	81.443	Scophthalmus_maximus
ENSLBEG00000013122	-	99	85.788	ENSSMAG00000013709	gars	57	85.788	Scophthalmus_maximus
ENSLBEG00000013122	-	100	82.474	ENSSDUG00000016795	gars	52	82.474	Seriola_dumerili
ENSLBEG00000013122	-	100	86.154	ENSSDUG00000016758	gars	63	86.154	Seriola_dumerili
ENSLBEG00000013122	-	100	85.567	ENSSLDG00000014238	gars	57	85.567	Seriola_lalandi_dorsalis
ENSLBEG00000013122	-	100	82.990	ENSSLDG00000014279	gars	52	82.990	Seriola_lalandi_dorsalis
ENSLBEG00000013122	-	100	79.124	ENSSPUG00000001815	-	52	79.124	Sphenodon_punctatus
ENSLBEG00000013122	-	100	82.768	ENSSPAG00000012003	gars	52	82.768	Stegastes_partitus
ENSLBEG00000013122	-	86	84.661	ENSSPAG00000011882	gars	94	84.661	Stegastes_partitus
ENSLBEG00000013122	-	100	78.608	ENSSSCG00000016677	GARS	52	78.608	Sus_scrofa
ENSLBEG00000013122	-	100	73.537	ENSTGUG00000000364	GARS	59	73.537	Taeniopygia_guttata
ENSLBEG00000013122	-	100	79.639	ENSTRUG00000017557	gars	52	79.639	Takifugu_rubripes
ENSLBEG00000013122	-	100	79.381	ENSTNIG00000012738	gars	55	79.381	Tetraodon_nigroviridis
ENSLBEG00000013122	-	99	77.261	ENSTTRG00000000334	GARS	58	77.261	Tursiops_truncatus
ENSLBEG00000013122	-	100	80.155	ENSUAMG00000016756	GARS	53	80.155	Ursus_americanus
ENSLBEG00000013122	-	100	80.779	ENSUMAG00000002158	GARS	63	80.155	Ursus_maritimus
ENSLBEG00000013122	-	100	65.979	ENSVPAG00000009438	GARS	53	65.979	Vicugna_pacos
ENSLBEG00000013122	-	99	79.070	ENSVVUG00000020981	GARS	50	79.070	Vulpes_vulpes
ENSLBEG00000013122	-	100	76.768	ENSXETG00000018474	gars	53	76.768	Xenopus_tropicalis
ENSLBEG00000013122	-	100	80.867	ENSXCOG00000010005	gars	52	80.867	Xiphophorus_couchianus
ENSLBEG00000013122	-	100	81.959	ENSXMAG00000009402	gars	51	81.959	Xiphophorus_maculatus