EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000013235 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5480 bases
Position: chrFKLU01001910.1:10596-16075
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000017177	zf-C2H2	PF00096.26	5.6e-31	1	5
ENSLBEP00000017177	zf-C2H2	PF00096.26	5.6e-31	2	5
ENSLBEP00000017177	zf-C2H2	PF00096.26	5.6e-31	3	5
ENSLBEP00000017177	zf-C2H2	PF00096.26	5.6e-31	4	5
ENSLBEP00000017177	zf-C2H2	PF00096.26	5.6e-31	5	5
ENSLBEP00000017177	zf-met	PF12874.7	4.6e-09	1	2
ENSLBEP00000017177	zf-met	PF12874.7	4.6e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000018143	-	1176	-	ENSLBEP00000017177	391 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000013235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013235's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000013235	-	94	40.833	ENSLBEG00000010165	-	89	37.540
ENSLBEG00000013235	-	95	30.848	ENSLBEG00000028271	-	94	30.848
ENSLBEG00000013235	-	75	46.000	ENSLBEG00000016666	znf341	51	30.769
ENSLBEG00000013235	-	93	38.261	ENSLBEG00000021260	-	100	38.122
ENSLBEG00000013235	-	96	37.054	ENSLBEG00000017726	-	91	37.054
ENSLBEG00000013235	-	65	50.633	ENSLBEG00000001715	-	84	50.633
ENSLBEG00000013235	-	87	61.264	ENSLBEG00000008320	-	80	46.552
ENSLBEG00000013235	-	84	36.496	ENSLBEG00000000972	snai2	80	36.496
ENSLBEG00000013235	-	78	43.396	ENSLBEG00000022059	-	89	43.396
ENSLBEG00000013235	-	79	30.392	ENSLBEG00000024749	hinfp	63	30.392
ENSLBEG00000013235	-	78	40.000	ENSLBEG00000012201	-	60	40.000
ENSLBEG00000013235	-	79	42.188	ENSLBEG00000008115	-	88	42.188
ENSLBEG00000013235	-	92	37.555	ENSLBEG00000015264	-	82	37.555
ENSLBEG00000013235	-	79	37.500	ENSLBEG00000011006	-	50	35.586
ENSLBEG00000013235	-	86	41.758	ENSLBEG00000024536	-	90	35.023
ENSLBEG00000013235	-	94	31.405	ENSLBEG00000014676	-	71	31.405
ENSLBEG00000013235	-	79	40.449	ENSLBEG00000000435	-	73	40.449
ENSLBEG00000013235	-	78	44.253	ENSLBEG00000006924	-	99	44.253
ENSLBEG00000013235	-	95	42.373	ENSLBEG00000001756	-	96	42.373
ENSLBEG00000013235	-	85	41.509	ENSLBEG00000007251	-	85	41.509
ENSLBEG00000013235	-	85	39.922	ENSLBEG00000025696	-	69	42.056
ENSLBEG00000013235	-	83	37.956	ENSLBEG00000011028	-	80	37.956
ENSLBEG00000013235	-	94	37.705	ENSLBEG00000028243	-	89	36.893
ENSLBEG00000013235	-	87	39.041	ENSLBEG00000024737	-	96	39.860
ENSLBEG00000013235	-	79	38.889	ENSLBEG00000023388	-	53	36.879
ENSLBEG00000013235	-	84	36.364	ENSLBEG00000014211	-	94	36.364
ENSLBEG00000013235	-	86	41.905	ENSLBEG00000004892	-	86	41.905
ENSLBEG00000013235	-	83	40.719	ENSLBEG00000010132	-	86	40.719
ENSLBEG00000013235	-	97	40.959	ENSLBEG00000011145	si:cabz01071911.3	95	38.176
ENSLBEG00000013235	-	80	41.892	ENSLBEG00000005729	znf652	92	32.338
ENSLBEG00000013235	-	86	36.364	ENSLBEG00000001920	-	92	41.304
ENSLBEG00000013235	-	93	35.519	ENSLBEG00000026019	-	59	36.111
ENSLBEG00000013235	-	77	36.641	ENSLBEG00000015419	scrt2	52	35.862
ENSLBEG00000013235	-	95	48.649	ENSLBEG00000002278	-	71	38.996
ENSLBEG00000013235	-	71	36.257	ENSLBEG00000014263	-	53	36.257
ENSLBEG00000013235	-	78	43.137	ENSLBEG00000024458	-	77	43.137
ENSLBEG00000013235	-	75	32.927	ENSLBEG00000024130	-	53	32.927
ENSLBEG00000013235	-	87	40.161	ENSLBEG00000000369	-	86	40.161
ENSLBEG00000013235	-	87	41.212	ENSLBEG00000008689	-	99	37.989
ENSLBEG00000013235	-	83	37.113	ENSLBEG00000006161	-	92	37.113
ENSLBEG00000013235	-	70	35.897	ENSLBEG00000026573	-	61	35.897
ENSLBEG00000013235	-	80	33.451	ENSLBEG00000025305	-	85	33.451
ENSLBEG00000013235	-	96	37.589	ENSLBEG00000020297	gfi1b	76	37.589
ENSLBEG00000013235	-	80	35.119	ENSLBEG00000005715	-	79	35.119
ENSLBEG00000013235	-	83	37.089	ENSLBEG00000008606	-	94	38.191
ENSLBEG00000013235	-	77	30.588	ENSLBEG00000013197	PRDM15	51	30.588
ENSLBEG00000013235	-	77	36.036	ENSLBEG00000028628	znf1174	52	35.678
ENSLBEG00000013235	-	84	36.681	ENSLBEG00000018509	-	97	35.674
ENSLBEG00000013235	-	97	36.444	ENSLBEG00000026552	-	68	36.444
ENSLBEG00000013235	-	92	50.000	ENSLBEG00000024454	-	68	51.562
ENSLBEG00000013235	-	95	36.170	ENSLBEG00000016562	znf646	71	36.170
ENSLBEG00000013235	-	79	40.284	ENSLBEG00000011250	-	61	40.000
ENSLBEG00000013235	-	87	38.527	ENSLBEG00000011091	si:cabz01071911.3	97	38.527
ENSLBEG00000013235	-	83	57.762	ENSLBEG00000014527	-	56	52.722
ENSLBEG00000013235	-	79	39.669	ENSLBEG00000000343	-	76	38.462
ENSLBEG00000013235	-	83	41.346	ENSLBEG00000020128	-	97	41.346
ENSLBEG00000013235	-	80	41.085	ENSLBEG00000004833	-	66	41.085
ENSLBEG00000013235	-	70	49.315	ENSLBEG00000012947	-	84	49.315
ENSLBEG00000013235	-	82	32.143	ENSLBEG00000008439	znf319b	82	31.975
ENSLBEG00000013235	-	79	35.385	ENSLBEG00000009580	-	81	35.897
ENSLBEG00000013235	-	77	36.548	ENSLBEG00000000393	-	69	36.548
ENSLBEG00000013235	-	76	45.238	ENSLBEG00000026457	-	93	45.238
ENSLBEG00000013235	-	88	37.874	ENSLBEG00000020747	-	91	37.874
ENSLBEG00000013235	-	78	38.996	ENSLBEG00000018970	-	80	38.996
ENSLBEG00000013235	-	80	40.000	ENSLBEG00000002594	-	73	44.231
ENSLBEG00000013235	-	92	41.104	ENSLBEG00000014282	-	95	41.040
ENSLBEG00000013235	-	95	34.586	ENSLBEG00000025689	-	81	34.586
ENSLBEG00000013235	-	80	34.495	ENSLBEG00000011986	-	91	35.417
ENSLBEG00000013235	-	93	43.137	ENSLBEG00000004867	-	92	43.137
ENSLBEG00000013235	-	71	46.429	ENSLBEG00000011588	-	97	46.429
ENSLBEG00000013235	-	84	32.558	ENSLBEG00000027993	-	86	32.524
ENSLBEG00000013235	-	87	40.609	ENSLBEG00000011289	-	62	38.587
ENSLBEG00000013235	-	76	39.241	ENSLBEG00000006963	-	78	39.241
ENSLBEG00000013235	-	85	36.816	ENSLBEG00000024509	-	96	42.581
ENSLBEG00000013235	-	79	32.065	ENSLBEG00000012151	zbtb48	52	32.065
ENSLBEG00000013235	-	82	42.063	ENSLBEG00000008733	-	66	42.063
ENSLBEG00000013235	-	90	43.182	ENSLBEG00000011040	-	53	43.182
ENSLBEG00000013235	-	82	37.584	ENSLBEG00000005307	znf236	72	37.584
ENSLBEG00000013235	-	94	41.758	ENSLBEG00000013570	-	99	39.931
ENSLBEG00000013235	-	85	40.299	ENSLBEG00000017450	-	92	40.299
ENSLBEG00000013235	-	64	42.157	ENSLBEG00000009567	-	67	41.441
ENSLBEG00000013235	-	80	33.333	ENSLBEG00000022736	prdm5	63	33.043
ENSLBEG00000013235	-	80	39.130	ENSLBEG00000011465	-	86	40.891
ENSLBEG00000013235	-	79	38.119	ENSLBEG00000017424	-	95	38.119
ENSLBEG00000013235	-	95	40.870	ENSLBEG00000007837	-	93	40.870
ENSLBEG00000013235	-	94	41.026	ENSLBEG00000015694	-	92	40.496
ENSLBEG00000013235	-	83	42.157	ENSLBEG00000008850	-	54	42.157
ENSLBEG00000013235	-	79	39.147	ENSLBEG00000004805	-	91	34.844
ENSLBEG00000013235	-	96	38.462	ENSLBEG00000010278	-	99	40.530
ENSLBEG00000013235	-	80	41.897	ENSLBEG00000011349	-	66	41.897
ENSLBEG00000013235	-	95	31.045	ENSLBEG00000009419	zbtb41	61	31.045
ENSLBEG00000013235	-	67	39.583	ENSLBEG00000008909	-	80	39.583
ENSLBEG00000013235	-	72	43.519	ENSLBEG00000007937	-	75	43.519
ENSLBEG00000013235	-	87	38.365	ENSLBEG00000011751	znf526	54	38.365
ENSLBEG00000013235	-	79	33.333	ENSLBEG00000022299	zbtb16b	50	33.333
ENSLBEG00000013235	-	80	41.497	ENSLBEG00000001132	-	95	41.497
ENSLBEG00000013235	-	96	44.444	ENSLBEG00000011313	-	81	44.444
ENSLBEG00000013235	-	65	41.772	ENSLBEG00000025139	-	82	41.772
ENSLBEG00000013235	-	87	39.130	ENSLBEG00000002357	-	88	40.000
ENSLBEG00000013235	-	77	32.946	ENSLBEG00000014195	-	60	32.946
ENSLBEG00000013235	-	79	40.794	ENSLBEG00000000373	-	70	40.794
ENSLBEG00000013235	-	78	38.614	ENSLBEG00000011210	-	54	38.614
ENSLBEG00000013235	-	78	39.548	ENSLBEG00000007106	-	64	39.548
ENSLBEG00000013235	-	60	39.796	ENSLBEG00000006082	zgc:171929	52	39.796

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000013235	-	80	45.455	ENSACAG00000027001	-	97	45.455	Anolis_carolinensis
ENSLBEG00000013235	-	84	39.764	ENSACAG00000026906	-	99	39.764	Anolis_carolinensis
ENSLBEG00000013235	-	97	43.421	ENSACAG00000026916	-	91	43.421	Anolis_carolinensis
ENSLBEG00000013235	-	93	34.985	ENSAMXG00000014745	-	90	34.985	Astyanax_mexicanus
ENSLBEG00000013235	-	74	51.250	ENSAMXG00000038122	-	93	51.250	Astyanax_mexicanus
ENSLBEG00000013235	-	96	40.000	ENSELUG00000021525	-	77	40.000	Esox_lucius
ENSLBEG00000013235	-	82	44.318	ENSELUG00000000485	-	90	44.318	Esox_lucius
ENSLBEG00000013235	-	82	34.333	ENSELUG00000011838	-	65	35.769	Esox_lucius
ENSLBEG00000013235	-	81	33.955	ENSELUG00000013806	-	64	33.955	Esox_lucius
ENSLBEG00000013235	-	84	41.270	ENSELUG00000018970	-	81	41.270	Esox_lucius
ENSLBEG00000013235	-	82	36.000	ENSGACG00000001523	-	99	36.000	Gasterosteus_aculeatus
ENSLBEG00000013235	-	83	35.336	ENSHBUG00000016384	-	92	35.336	Haplochromis_burtoni
ENSLBEG00000013235	-	80	40.625	ENSHCOG00000001629	-	87	40.625	Hippocampus_comes
ENSLBEG00000013235	-	80	43.333	ENSHCOG00000017456	-	93	43.333	Hippocampus_comes
ENSLBEG00000013235	-	85	35.714	ENSMGAG00000016603	-	100	35.714	Meleagris_gallopavo
ENSLBEG00000013235	-	84	41.434	ENSPNAG00000009176	-	88	41.434	Pygocentrus_nattereri
ENSLBEG00000013235	-	83	38.111	ENSPNAG00000009184	-	90	38.158	Pygocentrus_nattereri
ENSLBEG00000013235	-	84	39.662	ENSSFOG00015020993	-	82	37.500	Scleropages_formosus
ENSLBEG00000013235	-	80	38.007	ENSTNIG00000002343	-	88	38.007	Tetraodon_nigroviridis
ENSLBEG00000013235	-	81	38.224	ENSTNIG00000000528	-	96	38.224	Tetraodon_nigroviridis
ENSLBEG00000013235	-	95	36.683	ENSXMAG00000020042	-	89	34.605	Xiphophorus_maculatus