EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000013354 (Gene tree)
Gene ID: 109978306
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridylate synthase domain-containing protein 1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3802 bases
Position: chrFKLU01006620.1:3515-7316
Accession: 109978306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000017322	PseudoU_synth_2	PF00849.22	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000018295	RPUSD1-201	1699	XM_020627734	ENSLBEP00000017322	310 (aa)	XP_020483390	UPI0009B33EEB

Gene Model

Click here to download ENSLBEG00000013354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000013354	RPUSD1	100	100.000	ENSLBEG00000022502	rpusd1	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000013354	RPUSD1	98	56.393	ENSG00000007376	RPUSD1	99	67.665	Homo_sapiens
ENSLBEG00000013354	RPUSD1	100	79.677	ENSAPOG00000022221	rpusd1	100	78.065	Acanthochromis_polyacanthus
ENSLBEG00000013354	RPUSD1	98	56.066	ENSAMEG00000007461	RPUSD1	98	55.987	Ailuropoda_melanoleuca
ENSLBEG00000013354	RPUSD1	99	80.323	ENSACIG00000015863	rpusd1	100	79.677	Amphilophus_citrinellus
ENSLBEG00000013354	RPUSD1	100	80.968	ENSAOCG00000021975	rpusd1	97	80.968	Amphiprion_ocellaris
ENSLBEG00000013354	RPUSD1	100	81.290	ENSAPEG00000001316	rpusd1	97	81.290	Amphiprion_percula
ENSLBEG00000013354	RPUSD1	100	83.548	ENSATEG00000002984	rpusd1	100	83.548	Anabas_testudineus
ENSLBEG00000013354	RPUSD1	77	57.676	ENSAPLG00000012316	RPUSD1	98	57.261	Anas_platyrhynchos
ENSLBEG00000013354	RPUSD1	98	64.145	ENSACAG00000008953	RPUSD1	99	64.474	Anolis_carolinensis
ENSLBEG00000013354	RPUSD1	98	56.721	ENSANAG00000024709	RPUSD1	98	56.721	Aotus_nancymaae
ENSLBEG00000013354	RPUSD1	99	80.064	ENSACLG00000013692	rpusd1	100	77.814	Astatotilapia_calliptera
ENSLBEG00000013354	RPUSD1	98	67.434	ENSAMXG00000019802	rpusd1	99	65.461	Astyanax_mexicanus
ENSLBEG00000013354	RPUSD1	98	57.862	ENSBTAG00000000179	RPUSD1	98	59.672	Bos_taurus
ENSLBEG00000013354	RPUSD1	98	56.393	ENSCJAG00000012253	RPUSD1	98	56.393	Callithrix_jacchus
ENSLBEG00000013354	RPUSD1	98	56.066	ENSCAFG00000019614	RPUSD1	98	56.066	Canis_familiaris
ENSLBEG00000013354	RPUSD1	98	56.066	ENSCAFG00020008891	RPUSD1	98	56.066	Canis_lupus_dingo
ENSLBEG00000013354	RPUSD1	98	57.862	ENSCHIG00000012872	RPUSD1	98	59.672	Capra_hircus
ENSLBEG00000013354	RPUSD1	98	56.721	ENSTSYG00000036934	RPUSD1	98	56.452	Carlito_syrichta
ENSLBEG00000013354	RPUSD1	98	56.393	ENSCAPG00000014219	RPUSD1	83	64.032	Cavia_aperea
ENSLBEG00000013354	RPUSD1	98	56.393	ENSCPOG00000034604	RPUSD1	83	64.032	Cavia_porcellus
ENSLBEG00000013354	RPUSD1	98	57.049	ENSCCAG00000034385	RPUSD1	98	57.049	Cebus_capucinus
ENSLBEG00000013354	RPUSD1	98	57.049	ENSCATG00000042983	RPUSD1	98	57.049	Cercocebus_atys
ENSLBEG00000013354	RPUSD1	98	56.393	ENSCLAG00000013966	RPUSD1	83	64.427	Chinchilla_lanigera
ENSLBEG00000013354	RPUSD1	98	57.049	ENSCSAG00000012121	RPUSD1	98	57.049	Chlorocebus_sabaeus
ENSLBEG00000013354	RPUSD1	98	62.541	ENSCPBG00000021101	RPUSD1	99	61.889	Chrysemys_picta_bellii
ENSLBEG00000013354	RPUSD1	81	64.822	ENSCANG00000028576	RPUSD1	90	64.822	Colobus_angolensis_palliatus
ENSLBEG00000013354	RPUSD1	98	56.536	ENSCGRG00001014253	Rpusd1	98	56.536	Cricetulus_griseus_chok1gshd
ENSLBEG00000013354	RPUSD1	98	56.536	ENSCGRG00000017995	Rpusd1	98	56.536	Cricetulus_griseus_crigri
ENSLBEG00000013354	RPUSD1	98	80.263	ENSCSEG00000018512	rpusd1	98	78.947	Cynoglossus_semilaevis
ENSLBEG00000013354	RPUSD1	99	78.317	ENSCVAG00000022746	rpusd1	100	78.317	Cyprinodon_variegatus
ENSLBEG00000013354	RPUSD1	98	68.092	ENSDARG00000060192	rpusd1	99	67.105	Danio_rerio
ENSLBEG00000013354	RPUSD1	98	56.721	ENSDNOG00000003721	RPUSD1	98	56.393	Dasypus_novemcinctus
ENSLBEG00000013354	RPUSD1	98	57.049	ENSDORG00000026656	Rpusd1	98	57.049	Dipodomys_ordii
ENSLBEG00000013354	RPUSD1	96	46.326	ENSEBUG00000008767	rpusd1	75	54.435	Eptatretus_burgeri
ENSLBEG00000013354	RPUSD1	98	56.311	ENSEASG00005018421	RPUSD1	74	55.987	Equus_asinus_asinus
ENSLBEG00000013354	RPUSD1	99	71.895	ENSELUG00000014307	rpusd1	89	72.549	Esox_lucius
ENSLBEG00000013354	RPUSD1	96	57.143	ENSFCAG00000010359	RPUSD1	96	56.811	Felis_catus
ENSLBEG00000013354	RPUSD1	98	64.145	ENSFALG00000003211	RPUSD1	99	63.158	Ficedula_albicollis
ENSLBEG00000013354	RPUSD1	98	56.393	ENSFDAG00000013398	RPUSD1	98	55.738	Fukomys_damarensis
ENSLBEG00000013354	RPUSD1	99	77.346	ENSFHEG00000004736	rpusd1	100	77.023	Fundulus_heteroclitus
ENSLBEG00000013354	RPUSD1	99	72.313	ENSGMOG00000010756	rpusd1	99	73.616	Gadus_morhua
ENSLBEG00000013354	RPUSD1	98	62.500	ENSGALG00000005315	RPUSD1	99	62.541	Gallus_gallus
ENSLBEG00000013354	RPUSD1	99	77.346	ENSGAFG00000009886	rpusd1	100	77.346	Gambusia_affinis
ENSLBEG00000013354	RPUSD1	99	84.466	ENSGACG00000014276	rpusd1	100	84.466	Gasterosteus_aculeatus
ENSLBEG00000013354	RPUSD1	98	62.623	ENSGAGG00000004181	RPUSD1	99	61.564	Gopherus_agassizii
ENSLBEG00000013354	RPUSD1	98	57.190	ENSGGOG00000013997	RPUSD1	98	57.190	Gorilla_gorilla
ENSLBEG00000013354	RPUSD1	99	80.386	ENSHBUG00000023728	rpusd1	100	78.135	Haplochromis_burtoni
ENSLBEG00000013354	RPUSD1	98	55.410	ENSHGLG00000002595	RPUSD1	98	55.410	Heterocephalus_glaber_female
ENSLBEG00000013354	RPUSD1	98	55.410	ENSHGLG00100014303	RPUSD1	98	55.410	Heterocephalus_glaber_male
ENSLBEG00000013354	RPUSD1	99	75.817	ENSHCOG00000002390	rpusd1	99	75.817	Hippocampus_comes
ENSLBEG00000013354	RPUSD1	98	63.816	ENSIPUG00000001570	rpusd1	99	63.487	Ictalurus_punctatus
ENSLBEG00000013354	RPUSD1	98	58.361	ENSSTOG00000004276	RPUSD1	98	57.705	Ictidomys_tridecemlineatus
ENSLBEG00000013354	RPUSD1	98	57.705	ENSJJAG00000015696	Rpusd1	98	57.049	Jaculus_jaculus
ENSLBEG00000013354	RPUSD1	100	78.065	ENSKMAG00000017287	rpusd1	100	78.065	Kryptolebias_marmoratus
ENSLBEG00000013354	RPUSD1	98	61.842	ENSLACG00000008869	RPUSD1	99	62.623	Latimeria_chalumnae
ENSLBEG00000013354	RPUSD1	69	81.308	ENSLOCG00000005682	rpusd1	99	81.308	Lepisosteus_oculatus
ENSLBEG00000013354	RPUSD1	98	55.082	ENSLAFG00000002115	RPUSD1	98	54.754	Loxodonta_africana
ENSLBEG00000013354	RPUSD1	98	57.049	ENSMFAG00000003961	RPUSD1	98	57.049	Macaca_fascicularis
ENSLBEG00000013354	RPUSD1	98	57.049	ENSMMUG00000000842	RPUSD1	98	57.049	Macaca_mulatta
ENSLBEG00000013354	RPUSD1	98	57.049	ENSMNEG00000042712	RPUSD1	98	57.049	Macaca_nemestrina
ENSLBEG00000013354	RPUSD1	98	57.049	ENSMLEG00000030591	RPUSD1	98	57.049	Mandrillus_leucophaeus
ENSLBEG00000013354	RPUSD1	100	84.566	ENSMAMG00000004735	rpusd1	100	84.566	Mastacembelus_armatus
ENSLBEG00000013354	RPUSD1	99	80.064	ENSMZEG00005003214	rpusd1	100	77.814	Maylandia_zebra
ENSLBEG00000013354	RPUSD1	97	62.458	ENSMGAG00000005447	RPUSD1	99	62.667	Meleagris_gallopavo
ENSLBEG00000013354	RPUSD1	81	56.522	ENSMAUG00000019998	Rpusd1	96	56.522	Mesocricetus_auratus
ENSLBEG00000013354	RPUSD1	98	57.049	ENSMICG00000017561	RPUSD1	98	56.818	Microcebus_murinus
ENSLBEG00000013354	RPUSD1	98	56.863	ENSMOCG00000014082	Rpusd1	98	56.393	Microtus_ochrogaster
ENSLBEG00000013354	RPUSD1	98	79.672	ENSMMOG00000012569	rpusd1	99	78.176	Mola_mola
ENSLBEG00000013354	RPUSD1	99	60.784	ENSMODG00000016882	RPUSD1	99	60.784	Monodelphis_domestica
ENSLBEG00000013354	RPUSD1	100	82.958	ENSMALG00000017818	rpusd1	100	82.958	Monopterus_albus
ENSLBEG00000013354	RPUSD1	98	58.033	MGP_CAROLIEiJ_G0021244	Rpusd1	98	57.377	Mus_caroli
ENSLBEG00000013354	RPUSD1	98	57.705	ENSMUSG00000041199	Rpusd1	98	57.377	Mus_musculus
ENSLBEG00000013354	RPUSD1	98	57.049	MGP_PahariEiJ_G0023562	Rpusd1	98	57.049	Mus_pahari
ENSLBEG00000013354	RPUSD1	98	57.705	MGP_SPRETEiJ_G0022155	Rpusd1	98	57.377	Mus_spretus
ENSLBEG00000013354	RPUSD1	96	56.333	ENSMPUG00000015897	RPUSD1	96	56.000	Mustela_putorius_furo
ENSLBEG00000013354	RPUSD1	98	57.049	ENSMLUG00000001089	RPUSD1	77	67.500	Myotis_lucifugus
ENSLBEG00000013354	RPUSD1	98	56.958	ENSNGAG00000003595	Rpusd1	98	57.705	Nannospalax_galili
ENSLBEG00000013354	RPUSD1	99	77.814	ENSNBRG00000006457	rpusd1	100	77.346	Neolamprologus_brichardi
ENSLBEG00000013354	RPUSD1	54	47.337	ENSNLEG00000008424	-	97	47.337	Nomascus_leucogenys
ENSLBEG00000013354	RPUSD1	98	62.171	ENSMEUG00000016049	RPUSD1	98	60.645	Notamacropus_eugenii
ENSLBEG00000013354	RPUSD1	98	50.820	ENSOPRG00000008340	RPUSD1	98	50.492	Ochotona_princeps
ENSLBEG00000013354	RPUSD1	98	57.049	ENSODEG00000016945	RPUSD1	98	56.066	Octodon_degus
ENSLBEG00000013354	RPUSD1	99	80.844	ENSONIG00000015672	rpusd1	100	80.195	Oreochromis_niloticus
ENSLBEG00000013354	RPUSD1	100	76.129	ENSORLG00000013009	rpusd1	100	75.484	Oryzias_latipes
ENSLBEG00000013354	RPUSD1	100	76.452	ENSORLG00020010382	rpusd1	100	75.806	Oryzias_latipes_hni
ENSLBEG00000013354	RPUSD1	100	75.161	ENSORLG00015021354	rpusd1	100	74.516	Oryzias_latipes_hsok
ENSLBEG00000013354	RPUSD1	100	75.161	ENSOMEG00000021426	rpusd1	100	75.484	Oryzias_melastigma
ENSLBEG00000013354	RPUSD1	98	57.049	ENSOGAG00000003795	RPUSD1	98	57.049	Otolemur_garnettii
ENSLBEG00000013354	RPUSD1	98	58.176	ENSOARG00000014254	RPUSD1	98	60.000	Ovis_aries
ENSLBEG00000013354	RPUSD1	98	56.721	ENSPPAG00000034797	RPUSD1	98	56.721	Pan_paniscus
ENSLBEG00000013354	RPUSD1	96	57.143	ENSPPRG00000012389	RPUSD1	96	57.143	Panthera_pardus
ENSLBEG00000013354	RPUSD1	96	57.143	ENSPTIG00000008545	RPUSD1	74	75.510	Panthera_tigris_altaica
ENSLBEG00000013354	RPUSD1	98	56.721	ENSPTRG00000007565	RPUSD1	98	56.721	Pan_troglodytes
ENSLBEG00000013354	RPUSD1	98	57.049	ENSPANG00000024401	RPUSD1	98	57.049	Papio_anubis
ENSLBEG00000013354	RPUSD1	99	67.961	ENSPKIG00000018890	rpusd1	91	67.638	Paramormyrops_kingsleyae
ENSLBEG00000013354	RPUSD1	98	63.816	ENSPSIG00000013945	RPUSD1	99	63.816	Pelodiscus_sinensis
ENSLBEG00000013354	RPUSD1	99	74.110	ENSPMGG00000014950	rpusd1	99	73.786	Periophthalmus_magnuspinnatus
ENSLBEG00000013354	RPUSD1	98	57.049	ENSPEMG00000000497	Rpusd1	98	56.721	Peromyscus_maniculatus_bairdii
ENSLBEG00000013354	RPUSD1	98	54.754	ENSPMAG00000001563	rpusd1	99	54.397	Petromyzon_marinus
ENSLBEG00000013354	RPUSD1	99	62.092	ENSPCIG00000021216	-	93	61.290	Phascolarctos_cinereus
ENSLBEG00000013354	RPUSD1	99	77.670	ENSPFOG00000007946	rpusd1	100	76.052	Poecilia_formosa
ENSLBEG00000013354	RPUSD1	99	77.994	ENSPLAG00000011925	rpusd1	100	77.994	Poecilia_latipinna
ENSLBEG00000013354	RPUSD1	99	77.670	ENSPMEG00000002910	rpusd1	100	76.052	Poecilia_mexicana
ENSLBEG00000013354	RPUSD1	99	79.288	ENSPREG00000019851	rpusd1	100	79.288	Poecilia_reticulata
ENSLBEG00000013354	RPUSD1	98	43.934	ENSPCAG00000002258	RPUSD1	98	43.279	Procavia_capensis
ENSLBEG00000013354	RPUSD1	98	55.738	ENSPCOG00000022582	RPUSD1	98	55.738	Propithecus_coquereli
ENSLBEG00000013354	RPUSD1	98	53.115	ENSPVAG00000013104	RPUSD1	98	53.115	Pteropus_vampyrus
ENSLBEG00000013354	RPUSD1	99	80.386	ENSPNYG00000024076	rpusd1	100	78.135	Pundamilia_nyererei
ENSLBEG00000013354	RPUSD1	99	64.610	ENSPNAG00000013806	rpusd1	99	63.518	Pygocentrus_nattereri
ENSLBEG00000013354	RPUSD1	98	57.705	ENSRNOG00000023639	Rpusd1	98	57.377	Rattus_norvegicus
ENSLBEG00000013354	RPUSD1	98	57.377	ENSRBIG00000030238	RPUSD1	98	57.377	Rhinopithecus_bieti
ENSLBEG00000013354	RPUSD1	98	57.377	ENSRROG00000036663	RPUSD1	98	57.377	Rhinopithecus_roxellana
ENSLBEG00000013354	RPUSD1	98	57.377	ENSSBOG00000033063	RPUSD1	98	57.377	Saimiri_boliviensis_boliviensis
ENSLBEG00000013354	RPUSD1	98	62.215	ENSSHAG00000013500	RPUSD1	98	60.714	Sarcophilus_harrisii
ENSLBEG00000013354	RPUSD1	98	70.724	ENSSFOG00015014394	rpusd1	99	70.066	Scleropages_formosus
ENSLBEG00000013354	RPUSD1	99	84.790	ENSSMAG00000008045	rpusd1	93	84.790	Scophthalmus_maximus
ENSLBEG00000013354	RPUSD1	100	85.484	ENSSDUG00000001829	rpusd1	97	85.484	Seriola_dumerili
ENSLBEG00000013354	RPUSD1	100	85.484	ENSSLDG00000020853	rpusd1	97	85.484	Seriola_lalandi_dorsalis
ENSLBEG00000013354	RPUSD1	53	73.653	ENSSARG00000011187	-	100	73.653	Sorex_araneus
ENSLBEG00000013354	RPUSD1	62	59.794	ENSSPUG00000005119	-	98	58.763	Sphenodon_punctatus
ENSLBEG00000013354	RPUSD1	100	84.194	ENSSPAG00000012708	rpusd1	100	84.194	Stegastes_partitus
ENSLBEG00000013354	RPUSD1	98	57.377	ENSSSCG00000008000	RPUSD1	98	65.748	Sus_scrofa
ENSLBEG00000013354	RPUSD1	78	71.901	ENSTGUG00000015375	RPUSD1	99	69.721	Taeniopygia_guttata
ENSLBEG00000013354	RPUSD1	100	80.000	ENSTRUG00000003041	rpusd1	99	80.000	Takifugu_rubripes
ENSLBEG00000013354	RPUSD1	99	70.588	ENSTNIG00000002660	rpusd1	99	70.588	Tetraodon_nigroviridis
ENSLBEG00000013354	RPUSD1	98	57.705	ENSTTRG00000010167	RPUSD1	98	57.705	Tursiops_truncatus
ENSLBEG00000013354	RPUSD1	98	55.410	ENSUAMG00000012736	RPUSD1	98	55.410	Ursus_americanus
ENSLBEG00000013354	RPUSD1	98	55.410	ENSUMAG00000021174	RPUSD1	91	63.241	Ursus_maritimus
ENSLBEG00000013354	RPUSD1	98	56.393	ENSVVUG00000012357	RPUSD1	98	56.066	Vulpes_vulpes
ENSLBEG00000013354	RPUSD1	98	61.842	ENSXETG00000007184	rpusd1	98	61.842	Xenopus_tropicalis
ENSLBEG00000013354	RPUSD1	99	77.670	ENSXCOG00000017930	rpusd1	100	77.670	Xiphophorus_couchianus
ENSLBEG00000013354	RPUSD1	99	78.317	ENSXMAG00000024084	rpusd1	100	78.317	Xiphophorus_maculatus