EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000013469 (Gene tree)
Gene ID: 109984235
Gene Symbol: pusl1
Alias: -
Full Name: pseudouridine synthase like 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 11641 bases
Position: chrFKLU01000067.1:1731575-1743215
Accession: 109984235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000017486	PseudoU_synth_1	PF01416.20	2.6e-33	1	2
ENSLBEP00000017486	PseudoU_synth_1	PF01416.20	2.6e-33	2	2
ENSLBEP00000017506	PseudoU_synth_1	PF01416.20	1.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000018490	-	1609	-	ENSLBEP00000017506	282 (aa)	-	-
ENSLBET00000018470	-	1667	XM_020634301	ENSLBEP00000017486	291 (aa)	XP_020489957	UPI0009B41D9C

Gene Model

Click here to download ENSLBEG00000013469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000013469	pusl1	94	52.000	ENSG00000169972	PUSL1	97	49.593	Homo_sapiens
ENSLBEG00000013469	pusl1	100	73.630	ENSAPOG00000016290	pusl1	98	73.630	Acanthochromis_polyacanthus
ENSLBEG00000013469	pusl1	94	50.909	ENSAMEG00000013752	PUSL1	90	50.909	Ailuropoda_melanoleuca
ENSLBEG00000013469	pusl1	94	75.547	ENSACIG00000015240	pusl1	100	75.547	Amphilophus_citrinellus
ENSLBEG00000013469	pusl1	98	72.822	ENSAOCG00000019419	pusl1	86	72.822	Amphiprion_ocellaris
ENSLBEG00000013469	pusl1	100	71.918	ENSAPEG00000005452	pusl1	98	71.918	Amphiprion_percula
ENSLBEG00000013469	pusl1	100	75.685	ENSATEG00000024154	pusl1	98	75.685	Anabas_testudineus
ENSLBEG00000013469	pusl1	98	52.265	ENSAPLG00000004946	PUSL1	95	52.265	Anas_platyrhynchos
ENSLBEG00000013469	pusl1	88	55.426	ENSACAG00000014111	PUSL1	98	55.426	Anolis_carolinensis
ENSLBEG00000013469	pusl1	95	51.971	ENSANAG00000037456	PUSL1	91	51.971	Aotus_nancymaae
ENSLBEG00000013469	pusl1	100	77.740	ENSACLG00000008675	pusl1	97	77.740	Astatotilapia_calliptera
ENSLBEG00000013469	pusl1	97	60.854	ENSAMXG00000044007	pusl1	95	60.854	Astyanax_mexicanus
ENSLBEG00000013469	pusl1	94	52.364	ENSBTAG00000007619	PUSL1	94	52.364	Bos_taurus
ENSLBEG00000013469	pusl1	95	51.613	ENSCJAG00000010972	PUSL1	91	51.613	Callithrix_jacchus
ENSLBEG00000013469	pusl1	94	50.182	ENSCAFG00000019291	PUSL1	90	50.182	Canis_familiaris
ENSLBEG00000013469	pusl1	94	51.273	ENSCAFG00020011568	PUSL1	89	51.273	Canis_lupus_dingo
ENSLBEG00000013469	pusl1	94	52.000	ENSCHIG00000012615	PUSL1	95	52.000	Capra_hircus
ENSLBEG00000013469	pusl1	95	50.542	ENSCPOG00000005149	PUSL1	90	50.542	Cavia_porcellus
ENSLBEG00000013469	pusl1	95	51.613	ENSCCAG00000027475	PUSL1	91	51.613	Cebus_capucinus
ENSLBEG00000013469	pusl1	94	52.364	ENSCATG00000018260	PUSL1	90	52.364	Cercocebus_atys
ENSLBEG00000013469	pusl1	95	51.625	ENSCLAG00000005232	PUSL1	90	51.625	Chinchilla_lanigera
ENSLBEG00000013469	pusl1	94	52.174	ENSCSAG00000000680	PUSL1	90	52.174	Chlorocebus_sabaeus
ENSLBEG00000013469	pusl1	95	56.475	ENSCPBG00000022621	PUSL1	95	56.475	Chrysemys_picta_bellii
ENSLBEG00000013469	pusl1	94	52.000	ENSCANG00000034373	PUSL1	90	52.000	Colobus_angolensis_palliatus
ENSLBEG00000013469	pusl1	94	49.455	ENSCGRG00001012429	Pusl1	94	49.455	Cricetulus_griseus_chok1gshd
ENSLBEG00000013469	pusl1	94	49.455	ENSCGRG00000006466	Pusl1	94	49.455	Cricetulus_griseus_crigri
ENSLBEG00000013469	pusl1	99	72.789	ENSCSEG00000005159	pusl1	99	72.789	Cynoglossus_semilaevis
ENSLBEG00000013469	pusl1	83	60.593	ENSCVAG00000012923	pusl1	90	60.593	Cyprinodon_variegatus
ENSLBEG00000013469	pusl1	97	64.769	ENSDARG00000074565	pusl1	98	64.875	Danio_rerio
ENSLBEG00000013469	pusl1	96	34.202	FBgn0083976	CG34140	100	34.202	Drosophila_melanogaster
ENSLBEG00000013469	pusl1	93	52.920	ENSECAG00000006248	PUSL1	89	52.920	Equus_caballus
ENSLBEG00000013469	pusl1	94	50.000	ENSEEUG00000000837	PUSL1	93	50.000	Erinaceus_europaeus
ENSLBEG00000013469	pusl1	96	68.705	ENSELUG00000015945	pusl1	95	68.705	Esox_lucius
ENSLBEG00000013469	pusl1	94	52.364	ENSFCAG00000007617	PUSL1	91	52.364	Felis_catus
ENSLBEG00000013469	pusl1	99	74.306	ENSFHEG00000006370	pusl1	96	74.306	Fundulus_heteroclitus
ENSLBEG00000013469	pusl1	95	75.627	ENSGMOG00000019388	pusl1	99	75.627	Gadus_morhua
ENSLBEG00000013469	pusl1	96	54.122	ENSGALG00000001714	PUSL1	96	54.122	Gallus_gallus
ENSLBEG00000013469	pusl1	98	74.035	ENSGAFG00000007546	pusl1	97	74.035	Gambusia_affinis
ENSLBEG00000013469	pusl1	100	74.403	ENSGACG00000007848	pusl1	97	74.403	Gasterosteus_aculeatus
ENSLBEG00000013469	pusl1	98	55.944	ENSGAGG00000004730	PUSL1	98	55.944	Gopherus_agassizii
ENSLBEG00000013469	pusl1	85	51.452	ENSGGOG00000005364	PUSL1	93	51.452	Gorilla_gorilla
ENSLBEG00000013469	pusl1	100	78.082	ENSHBUG00000001264	pusl1	97	78.082	Haplochromis_burtoni
ENSLBEG00000013469	pusl1	95	50.360	ENSHGLG00000017570	PUSL1	90	50.360	Heterocephalus_glaber_female
ENSLBEG00000013469	pusl1	89	49.618	ENSHGLG00100007641	PUSL1	86	49.618	Heterocephalus_glaber_male
ENSLBEG00000013469	pusl1	95	76.087	ENSHCOG00000010077	pusl1	100	76.087	Hippocampus_comes
ENSLBEG00000013469	pusl1	97	62.278	ENSIPUG00000023921	pusl1	97	62.278	Ictalurus_punctatus
ENSLBEG00000013469	pusl1	94	52.000	ENSSTOG00000001783	PUSL1	85	52.000	Ictidomys_tridecemlineatus
ENSLBEG00000013469	pusl1	94	52.727	ENSJJAG00000020471	Pusl1	93	52.727	Jaculus_jaculus
ENSLBEG00000013469	pusl1	90	68.775	ENSKMAG00000005154	pusl1	87	69.922	Kryptolebias_marmoratus
ENSLBEG00000013469	pusl1	68	54.688	ENSLACG00000018795	PUSL1	95	55.959	Latimeria_chalumnae
ENSLBEG00000013469	pusl1	100	55.137	ENSLOCG00000002210	pusl1	97	55.137	Lepisosteus_oculatus
ENSLBEG00000013469	pusl1	89	52.107	ENSLAFG00000013685	PUSL1	97	52.107	Loxodonta_africana
ENSLBEG00000013469	pusl1	94	52.000	ENSMFAG00000046288	PUSL1	90	52.000	Macaca_fascicularis
ENSLBEG00000013469	pusl1	94	46.182	ENSMMUG00000016279	PUSL1	89	46.182	Macaca_mulatta
ENSLBEG00000013469	pusl1	94	52.000	ENSMNEG00000037989	PUSL1	90	52.000	Macaca_nemestrina
ENSLBEG00000013469	pusl1	99	75.601	ENSMAMG00000016538	pusl1	96	75.601	Mastacembelus_armatus
ENSLBEG00000013469	pusl1	100	77.740	ENSMZEG00005026990	pusl1	97	77.740	Maylandia_zebra
ENSLBEG00000013469	pusl1	96	53.047	ENSMGAG00000003037	PUSL1	95	53.047	Meleagris_gallopavo
ENSLBEG00000013469	pusl1	94	49.455	ENSMAUG00000019924	Pusl1	94	49.455	Mesocricetus_auratus
ENSLBEG00000013469	pusl1	94	51.636	ENSMICG00000014171	PUSL1	93	51.636	Microcebus_murinus
ENSLBEG00000013469	pusl1	94	51.636	ENSMOCG00000005602	Pusl1	94	51.636	Microtus_ochrogaster
ENSLBEG00000013469	pusl1	95	79.643	ENSMMOG00000003269	pusl1	100	79.643	Mola_mola
ENSLBEG00000013469	pusl1	100	76.451	ENSMALG00000021686	pusl1	97	76.451	Monopterus_albus
ENSLBEG00000013469	pusl1	94	50.545	MGP_CAROLIEiJ_G0026911	Pusl1	94	50.545	Mus_caroli
ENSLBEG00000013469	pusl1	94	50.182	ENSMUSG00000051557	Pusl1	94	50.182	Mus_musculus
ENSLBEG00000013469	pusl1	94	50.545	MGP_PahariEiJ_G0029260	Pusl1	94	50.545	Mus_pahari
ENSLBEG00000013469	pusl1	94	50.909	MGP_SPRETEiJ_G0027906	Pusl1	94	50.909	Mus_spretus
ENSLBEG00000013469	pusl1	95	51.264	ENSMPUG00000014313	PUSL1	90	51.264	Mustela_putorius_furo
ENSLBEG00000013469	pusl1	95	51.079	ENSNGAG00000004647	Pusl1	83	51.079	Nannospalax_galili
ENSLBEG00000013469	pusl1	96	68.794	ENSNBRG00000014762	pusl1	96	68.794	Neolamprologus_brichardi
ENSLBEG00000013469	pusl1	85	53.012	ENSNLEG00000000051	PUSL1	90	53.012	Nomascus_leucogenys
ENSLBEG00000013469	pusl1	93	41.912	ENSMEUG00000005176	-	98	41.912	Notamacropus_eugenii
ENSLBEG00000013469	pusl1	94	53.091	ENSMEUG00000011649	-	96	53.091	Notamacropus_eugenii
ENSLBEG00000013469	pusl1	94	51.812	ENSODEG00000008247	PUSL1	88	51.812	Octodon_degus
ENSLBEG00000013469	pusl1	100	77.740	ENSONIG00000019361	pusl1	97	77.740	Oreochromis_niloticus
ENSLBEG00000013469	pusl1	98	71.429	ENSORLG00000016228	pusl1	97	71.429	Oryzias_latipes
ENSLBEG00000013469	pusl1	98	71.777	ENSORLG00020013710	pusl1	97	71.777	Oryzias_latipes_hni
ENSLBEG00000013469	pusl1	96	72.242	ENSORLG00015008715	pusl1	99	72.242	Oryzias_latipes_hsok
ENSLBEG00000013469	pusl1	99	71.379	ENSOMEG00000018897	pusl1	100	71.379	Oryzias_melastigma
ENSLBEG00000013469	pusl1	94	52.364	ENSOGAG00000031692	PUSL1	95	52.364	Otolemur_garnettii
ENSLBEG00000013469	pusl1	89	50.958	ENSOARG00000004905	PUSL1	97	50.958	Ovis_aries
ENSLBEG00000013469	pusl1	94	52.727	ENSPPAG00000029283	PUSL1	90	52.727	Pan_paniscus
ENSLBEG00000013469	pusl1	94	52.364	ENSPPRG00000023329	PUSL1	91	52.364	Panthera_pardus
ENSLBEG00000013469	pusl1	89	51.538	ENSPTIG00000018532	PUSL1	96	51.538	Panthera_tigris_altaica
ENSLBEG00000013469	pusl1	94	52.727	ENSPTRG00000000021	PUSL1	90	52.727	Pan_troglodytes
ENSLBEG00000013469	pusl1	94	52.000	ENSPANG00000000591	PUSL1	90	52.000	Papio_anubis
ENSLBEG00000013469	pusl1	96	61.071	ENSPKIG00000002447	pusl1	97	61.071	Paramormyrops_kingsleyae
ENSLBEG00000013469	pusl1	87	57.708	ENSPSIG00000002781	PUSL1	94	57.708	Pelodiscus_sinensis
ENSLBEG00000013469	pusl1	94	70.182	ENSPMGG00000011051	pusl1	99	70.182	Periophthalmus_magnuspinnatus
ENSLBEG00000013469	pusl1	94	51.636	ENSPEMG00000013541	Pusl1	94	51.636	Peromyscus_maniculatus_bairdii
ENSLBEG00000013469	pusl1	95	52.669	ENSPCIG00000007816	-	64	52.669	Phascolarctos_cinereus
ENSLBEG00000013469	pusl1	97	71.731	ENSPFOG00000015448	pusl1	94	71.731	Poecilia_formosa
ENSLBEG00000013469	pusl1	99	71.875	ENSPLAG00000004348	pusl1	97	71.875	Poecilia_latipinna
ENSLBEG00000013469	pusl1	99	71.875	ENSPMEG00000000931	pusl1	97	71.875	Poecilia_mexicana
ENSLBEG00000013469	pusl1	99	69.444	ENSPREG00000002324	pusl1	97	69.444	Poecilia_reticulata
ENSLBEG00000013469	pusl1	88	48.249	ENSPPYG00000002014	PUSL1	91	48.249	Pongo_abelii
ENSLBEG00000013469	pusl1	66	48.148	ENSPCAG00000002272	PUSL1	77	48.148	Procavia_capensis
ENSLBEG00000013469	pusl1	69	60.563	ENSPVAG00000001016	PUSL1	66	60.563	Pteropus_vampyrus
ENSLBEG00000013469	pusl1	82	78.750	ENSPNYG00000006588	pusl1	100	78.750	Pundamilia_nyererei
ENSLBEG00000013469	pusl1	97	63.701	ENSPNAG00000024441	pusl1	97	63.701	Pygocentrus_nattereri
ENSLBEG00000013469	pusl1	94	50.545	ENSRNOG00000022354	Pusl1	94	50.545	Rattus_norvegicus
ENSLBEG00000013469	pusl1	94	51.636	ENSRBIG00000036842	PUSL1	90	51.636	Rhinopithecus_bieti
ENSLBEG00000013469	pusl1	94	51.636	ENSRROG00000030704	PUSL1	90	51.636	Rhinopithecus_roxellana
ENSLBEG00000013469	pusl1	90	49.242	ENSSBOG00000032249	PUSL1	95	49.242	Saimiri_boliviensis_boliviensis
ENSLBEG00000013469	pusl1	52	53.333	ENSSHAG00000004840	-	84	50.000	Sarcophilus_harrisii
ENSLBEG00000013469	pusl1	93	63.736	ENSSFOG00015008281	pusl1	90	63.736	Scleropages_formosus
ENSLBEG00000013469	pusl1	100	73.973	ENSSMAG00000007187	pusl1	97	73.973	Scophthalmus_maximus
ENSLBEG00000013469	pusl1	100	76.370	ENSSDUG00000000287	pusl1	90	76.370	Seriola_dumerili
ENSLBEG00000013469	pusl1	100	76.712	ENSSLDG00000009605	pusl1	93	76.712	Seriola_lalandi_dorsalis
ENSLBEG00000013469	pusl1	62	50.279	ENSSARG00000005323	-	94	50.279	Sorex_araneus
ENSLBEG00000013469	pusl1	94	71.533	ENSSPAG00000002528	pusl1	100	71.533	Stegastes_partitus
ENSLBEG00000013469	pusl1	94	52.347	ENSSSCG00000003338	PUSL1	89	52.347	Sus_scrofa
ENSLBEG00000013469	pusl1	93	55.311	ENSTGUG00000003214	PUSL1	96	55.474	Taeniopygia_guttata
ENSLBEG00000013469	pusl1	99	76.817	ENSTRUG00000010102	pusl1	97	76.817	Takifugu_rubripes
ENSLBEG00000013469	pusl1	64	76.796	ENSTNIG00000005789	pusl1	82	76.796	Tetraodon_nigroviridis
ENSLBEG00000013469	pusl1	62	47.222	ENSTBEG00000005001	PUSL1	74	47.222	Tupaia_belangeri
ENSLBEG00000013469	pusl1	94	46.739	ENSTTRG00000017030	PUSL1	90	46.739	Tursiops_truncatus
ENSLBEG00000013469	pusl1	85	50.826	ENSUAMG00000012801	PUSL1	79	50.826	Ursus_americanus
ENSLBEG00000013469	pusl1	85	51.240	ENSUMAG00000002084	PUSL1	79	51.240	Ursus_maritimus
ENSLBEG00000013469	pusl1	94	51.273	ENSVVUG00000004320	PUSL1	90	45.223	Vulpes_vulpes
ENSLBEG00000013469	pusl1	78	53.712	ENSXETG00000011145	pusl1	100	53.712	Xenopus_tropicalis
ENSLBEG00000013469	pusl1	96	69.643	ENSXCOG00000017748	pusl1	99	69.643	Xiphophorus_couchianus
ENSLBEG00000013469	pusl1	99	73.264	ENSXMAG00000018846	pusl1	97	73.264	Xiphophorus_maculatus