EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000013492 (Gene tree)
Gene ID
109989080
Gene Symbol
CPSF3 (1 of many)
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Minus strand
Length
5612 bases
Position
chrFKLU01000152.1:141300-146911
Accession
109989080
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000017525CPSF73-100_CPF11718.86.2e-4511
ENSLBEP00000017525Beta-CaspPF10996.89.7e-3411
ENSLBEP00000017525Lactamase_BPF00753.271.6e-1811
ENSLBEP00000017525RMMBLPF07521.126.3e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000018510CPSF3 (1 of many)-2011986XM_020640704ENSLBEP00000017525661 (aa)XP_020496360-
Gene Model
Click here to download ENSLBEG00000013492's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013492's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000013492CPSF35781.867ENSLBEG00000015018-9981.867
ENSLBEG00000013492CPSF38734.295ENSLBEG00000011392ints119734.295
ENSLBEG00000013492CPSF39287.705ENSLBEG00000020569cpsf38987.705
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000013492CPSF39889.043ENSG00000119203CPSF3100100.000Homo_sapiens
ENSLBEG00000013492CPSF39988.889ENSAPOG00000022087cpsf39688.889Acanthochromis_polyacanthus
ENSLBEG00000013492CPSF37897.868ENSAPOG00000012241CPSF39297.868Acanthochromis_polyacanthus
ENSLBEG00000013492CPSF39889.352ENSAMEG00000008493CPSF39589.352Ailuropoda_melanoleuca
ENSLBEG00000013492CPSF39094.482ENSACIG00000023663CPSF39587.386Amphilophus_citrinellus
ENSLBEG00000013492CPSF39085.595ENSACIG00000009846cpsf39485.595Amphilophus_citrinellus
ENSLBEG00000013492CPSF39997.273ENSAOCG00000010077CPSF39697.273Amphiprion_ocellaris
ENSLBEG00000013492CPSF39988.737ENSAOCG00000022056cpsf39692.833Amphiprion_ocellaris
ENSLBEG00000013492CPSF310097.277ENSAPEG00000021167CPSF39897.277Amphiprion_percula
ENSLBEG00000013492CPSF39988.906ENSAPEG00000019526cpsf39988.906Amphiprion_percula
ENSLBEG00000013492CPSF39989.193ENSATEG00000003959cpsf39689.193Anabas_testudineus
ENSLBEG00000013492CPSF39990.715ENSATEG00000014525CPSF39590.715Anabas_testudineus
ENSLBEG00000013492CPSF39788.106ENSAPLG00000006941CPSF39488.106Anas_platyrhynchos
ENSLBEG00000013492CPSF39186.213ENSACAG00000001759CPSF39586.213Anolis_carolinensis
ENSLBEG00000013492CPSF39883.051ENSANAG00000031254CPSF39583.051Aotus_nancymaae
ENSLBEG00000013492CPSF39689.151ENSACLG00000014484cpsf39689.151Astatotilapia_calliptera
ENSLBEG00000013492CPSF39095.151ENSACLG00000018846CPSF39587.994Astatotilapia_calliptera
ENSLBEG00000013492CPSF39990.563ENSAMXG00000004786cpsf39590.563Astyanax_mexicanus
ENSLBEG00000013492CPSF39889.352ENSBTAG00000019735CPSF39589.352Bos_taurus
ENSLBEG00000013492CPSF39457.571WBGene00013460cpsf-38957.571Caenorhabditis_elegans
ENSLBEG00000013492CPSF39888.889ENSCJAG00000006276CPSF39588.889Callithrix_jacchus
ENSLBEG00000013492CPSF39889.352ENSCAFG00000003375CPSF39089.352Canis_familiaris
ENSLBEG00000013492CPSF39390.909ENSCAFG00020026799CPSF39990.909Canis_lupus_dingo
ENSLBEG00000013492CPSF39889.352ENSCHIG00000013973CPSF39589.352Capra_hircus
ENSLBEG00000013492CPSF39889.043ENSTSYG00000002967CPSF39589.043Carlito_syrichta
ENSLBEG00000013492CPSF39688.801ENSCAPG00000013851CPSF39588.801Cavia_aperea
ENSLBEG00000013492CPSF39888.889ENSCPOG00000011299CPSF39588.889Cavia_porcellus
ENSLBEG00000013492CPSF39888.889ENSCCAG00000036730CPSF39588.889Cebus_capucinus
ENSLBEG00000013492CPSF39886.749ENSCATG00000014770CPSF39993.426Cercocebus_atys
ENSLBEG00000013492CPSF39888.735ENSCLAG00000002727CPSF39588.735Chinchilla_lanigera
ENSLBEG00000013492CPSF39880.710ENSCSAG00000007125CPSF39480.710Chlorocebus_sabaeus
ENSLBEG00000013492CPSF379100.000ENSCHOG00000000180CPSF37667.262Choloepus_hoffmanni
ENSLBEG00000013492CPSF39988.450ENSCPBG00000014074CPSF39588.450Chrysemys_picta_bellii
ENSLBEG00000013492CPSF39869.832ENSCING00000007214-9469.832Ciona_intestinalis
ENSLBEG00000013492CPSF39878.254ENSCANG00000034435CPSF39478.254Colobus_angolensis_palliatus
ENSLBEG00000013492CPSF39888.906ENSCGRG00001013134Cpsf39588.906Cricetulus_griseus_chok1gshd
ENSLBEG00000013492CPSF39888.906ENSCGRG00000018319Cpsf39588.906Cricetulus_griseus_crigri
ENSLBEG00000013492CPSF39994.521ENSCSEG00000002021CPSF39594.780Cynoglossus_semilaevis
ENSLBEG00000013492CPSF39996.651ENSCVAG00000015067CPSF39596.651Cyprinodon_variegatus
ENSLBEG00000013492CPSF39990.715ENSDARG00000027649cpsf39590.715Danio_rerio
ENSLBEG00000013492CPSF39888.136ENSDNOG00000008940CPSF39088.136Dasypus_novemcinctus
ENSLBEG00000013492CPSF39888.735ENSDORG00000014263Cpsf39988.735Dipodomys_ordii
ENSLBEG00000013492CPSF39868.056FBgn0261065Cpsf739468.056Drosophila_melanogaster
ENSLBEG00000013492CPSF39876.698ENSETEG00000003893CPSF39976.698Echinops_telfairi
ENSLBEG00000013492CPSF39980.182ENSEBUG00000009018cpsf39380.182Eptatretus_burgeri
ENSLBEG00000013492CPSF39889.352ENSEASG00005003970CPSF39589.352Equus_asinus_asinus
ENSLBEG00000013492CPSF39889.352ENSECAG00000019911CPSF39692.917Equus_caballus
ENSLBEG00000013492CPSF39873.148ENSEEUG00000015422CPSF39573.148Erinaceus_europaeus
ENSLBEG00000013492CPSF39991.476ENSELUG00000013775cpsf39591.476Esox_lucius
ENSLBEG00000013492CPSF39889.352ENSFCAG00000007852CPSF39589.352Felis_catus
ENSLBEG00000013492CPSF39388.274ENSFALG00000006572CPSF39588.274Ficedula_albicollis
ENSLBEG00000013492CPSF39888.272ENSFDAG00000006317CPSF39488.272Fukomys_damarensis
ENSLBEG00000013492CPSF35679.310ENSFHEG00000012186CPSF39179.310Fundulus_heteroclitus
ENSLBEG00000013492CPSF39987.994ENSFHEG00000014774cpsf39687.994Fundulus_heteroclitus
ENSLBEG00000013492CPSF39989.802ENSGMOG00000003157cpsf39589.802Gadus_morhua
ENSLBEG00000013492CPSF39987.805ENSGALG00000016424CPSF39587.805Gallus_gallus
ENSLBEG00000013492CPSF39995.890ENSGAFG00000008016CPSF39595.890Gambusia_affinis
ENSLBEG00000013492CPSF39086.074ENSGAFG00000019449cpsf39579.604Gambusia_affinis
ENSLBEG00000013492CPSF36684.404ENSGAGG00000025583CPSF38784.404Gopherus_agassizii
ENSLBEG00000013492CPSF39886.727ENSGGOG00000001757CPSF39198.065Gorilla_gorilla
ENSLBEG00000013492CPSF39988.939ENSHBUG00000001188cpsf39688.939Haplochromis_burtoni
ENSLBEG00000013492CPSF35691.667ENSHBUG00000014332CPSF39291.667Haplochromis_burtoni
ENSLBEG00000013492CPSF39888.272ENSHGLG00000000666CPSF39488.272Heterocephalus_glaber_female
ENSLBEG00000013492CPSF39888.272ENSHGLG00100007765CPSF39488.272Heterocephalus_glaber_male
ENSLBEG00000013492CPSF39988.128ENSHCOG00000007251cpsf39688.128Hippocampus_comes
ENSLBEG00000013492CPSF39994.521ENSHCOG00000015957CPSF39494.521Hippocampus_comes
ENSLBEG00000013492CPSF39990.274ENSIPUG00000023488cpsf39590.122Ictalurus_punctatus
ENSLBEG00000013492CPSF39889.198ENSSTOG00000004476CPSF39589.198Ictidomys_tridecemlineatus
ENSLBEG00000013492CPSF39888.598ENSJJAG00000023415Cpsf39588.598Jaculus_jaculus
ENSLBEG00000013492CPSF39997.412ENSKMAG00000007317CPSF39597.412Kryptolebias_marmoratus
ENSLBEG00000013492CPSF39987.976ENSKMAG00000002806cpsf39687.976Kryptolebias_marmoratus
ENSLBEG00000013492CPSF39981.915ENSLACG00000008308CPSF39581.915Latimeria_chalumnae
ENSLBEG00000013492CPSF39990.152ENSLOCG00000016823cpsf39590.152Lepisosteus_oculatus
ENSLBEG00000013492CPSF39887.790ENSLAFG00000009467CPSF39587.790Loxodonta_africana
ENSLBEG00000013492CPSF39888.889ENSMFAG00000001339CPSF39495.208Macaca_fascicularis
ENSLBEG00000013492CPSF39092.462ENSMMUG00000018038CPSF39295.208Macaca_mulatta
ENSLBEG00000013492CPSF38998.000ENSMNEG00000039447CPSF39498.000Macaca_nemestrina
ENSLBEG00000013492CPSF39889.043ENSMLEG00000026825CPSF39297.854Mandrillus_leucophaeus
ENSLBEG00000013492CPSF39794.992ENSMAMG00000008835CPSF39588.316Mastacembelus_armatus
ENSLBEG00000013492CPSF39988.584ENSMAMG00000003076cpsf39688.584Mastacembelus_armatus
ENSLBEG00000013492CPSF39988.939ENSMZEG00005014358cpsf39688.939Maylandia_zebra
ENSLBEG00000013492CPSF39996.651ENSMZEG00005006258CPSF39596.651Maylandia_zebra
ENSLBEG00000013492CPSF39688.013ENSMGAG00000013995CPSF39588.013Meleagris_gallopavo
ENSLBEG00000013492CPSF35279.651ENSMAUG00000000166Cpsf39179.651Mesocricetus_auratus
ENSLBEG00000013492CPSF39884.105ENSMICG00000002363CPSF39584.105Microcebus_murinus
ENSLBEG00000013492CPSF39390.569ENSMOCG00000020067Cpsf39490.569Microtus_ochrogaster
ENSLBEG00000013492CPSF39384.666ENSMMOG00000018212CPSF39484.666Mola_mola
ENSLBEG00000013492CPSF37972.917ENSMMOG00000011923CPSF37878.929Mola_mola
ENSLBEG00000013492CPSF39887.671ENSMODG00000014703CPSF39587.671Monodelphis_domestica
ENSLBEG00000013492CPSF39989.041ENSMALG00000016416cpsf39689.041Monopterus_albus
ENSLBEG00000013492CPSF38995.447ENSMALG00000011474CPSF39695.447Monopterus_albus
ENSLBEG00000013492CPSF39888.735MGP_CAROLIEiJ_G0017640Cpsf39588.735Mus_caroli
ENSLBEG00000013492CPSF39888.735ENSMUSG00000054309Cpsf39698.305Mus_musculus
ENSLBEG00000013492CPSF39888.580MGP_PahariEiJ_G0029397Cpsf39588.580Mus_pahari
ENSLBEG00000013492CPSF39888.735MGP_SPRETEiJ_G0018481Cpsf39588.735Mus_spretus
ENSLBEG00000013492CPSF39889.352ENSMPUG00000013213CPSF39589.352Mustela_putorius_furo
ENSLBEG00000013492CPSF39889.368ENSMLUG00000010636CPSF39589.368Myotis_lucifugus
ENSLBEG00000013492CPSF39888.752ENSNGAG00000019836Cpsf39588.752Nannospalax_galili
ENSLBEG00000013492CPSF39095.151ENSNBRG00000010525CPSF39587.994Neolamprologus_brichardi
ENSLBEG00000013492CPSF39988.333ENSNBRG00000004770cpsf39688.333Neolamprologus_brichardi
ENSLBEG00000013492CPSF39888.889ENSNLEG00000013359CPSF39198.065Nomascus_leucogenys
ENSLBEG00000013492CPSF39360.163ENSMEUG00000013117-9060.163Notamacropus_eugenii
ENSLBEG00000013492CPSF39880.093ENSOPRG00000008902CPSF39580.093Ochotona_princeps
ENSLBEG00000013492CPSF39888.889ENSODEG00000003129CPSF39588.889Octodon_degus
ENSLBEG00000013492CPSF39989.498ENSONIG00000018812cpsf39689.498Oreochromis_niloticus
ENSLBEG00000013492CPSF38087.382ENSOANG00000008577CPSF39487.382Ornithorhynchus_anatinus
ENSLBEG00000013492CPSF39889.043ENSOCUG00000003728CPSF39589.043Oryctolagus_cuniculus
ENSLBEG00000013492CPSF39987.538ENSORLG00000018854cpsf39687.538Oryzias_latipes
ENSLBEG00000013492CPSF39987.386ENSORLG00020013331cpsf39687.386Oryzias_latipes_hni
ENSLBEG00000013492CPSF39987.538ENSORLG00015011017cpsf39687.538Oryzias_latipes_hsok
ENSLBEG00000013492CPSF39987.386ENSOMEG00000010647cpsf39287.386Oryzias_melastigma
ENSLBEG00000013492CPSF39878.395ENSOGAG00000001680CPSF39578.395Otolemur_garnettii
ENSLBEG00000013492CPSF39889.352ENSOARG00000015073CPSF39589.352Ovis_aries
ENSLBEG00000013492CPSF39889.043ENSPPAG00000042457CPSF39198.065Pan_paniscus
ENSLBEG00000013492CPSF39889.352ENSPPRG00000016790CPSF39589.352Panthera_pardus
ENSLBEG00000013492CPSF39889.490ENSPTIG00000003920CPSF39589.490Panthera_tigris_altaica
ENSLBEG00000013492CPSF39889.043ENSPTRG00000011638CPSF39198.065Pan_troglodytes
ENSLBEG00000013492CPSF39888.889ENSPANG00000016798CPSF39495.208Papio_anubis
ENSLBEG00000013492CPSF39991.781ENSPKIG00000023646cpsf39592.007Paramormyrops_kingsleyae
ENSLBEG00000013492CPSF39887.827ENSPSIG00000016144CPSF39587.827Pelodiscus_sinensis
ENSLBEG00000013492CPSF38390.018ENSPMGG00000006141-9682.680Periophthalmus_magnuspinnatus
ENSLBEG00000013492CPSF35691.129ENSPMGG00000015311CPSF39291.129Periophthalmus_magnuspinnatus
ENSLBEG00000013492CPSF39889.198ENSPEMG00000017668Cpsf39589.198Peromyscus_maniculatus_bairdii
ENSLBEG00000013492CPSF38289.134ENSPMAG00000004841cpsf39989.134Petromyzon_marinus
ENSLBEG00000013492CPSF39689.117ENSPCIG00000009823CPSF39589.117Phascolarctos_cinereus
ENSLBEG00000013492CPSF39987.823ENSPFOG00000015922cpsf39687.823Poecilia_formosa
ENSLBEG00000013492CPSF39995.434ENSPFOG00000010418-9595.434Poecilia_formosa
ENSLBEG00000013492CPSF39987.823ENSPLAG00000000882cpsf39687.823Poecilia_latipinna
ENSLBEG00000013492CPSF35693.817ENSPLAG00000021300-9293.817Poecilia_latipinna
ENSLBEG00000013492CPSF39987.976ENSPMEG00000018309cpsf39687.976Poecilia_mexicana
ENSLBEG00000013492CPSF39085.906ENSPREG00000014875cpsf39579.452Poecilia_reticulata
ENSLBEG00000013492CPSF39987.823ENSPREG00000004482CPSF39587.823Poecilia_reticulata
ENSLBEG00000013492CPSF39884.438ENSPPYG00000012666CPSF39584.438Pongo_abelii
ENSLBEG00000013492CPSF38865.725ENSPCAG00000015042CPSF38965.725Procavia_capensis
ENSLBEG00000013492CPSF38590.323ENSPCOG00000023016CPSF39190.323Propithecus_coquereli
ENSLBEG00000013492CPSF39889.198ENSPVAG00000005324CPSF39589.198Pteropus_vampyrus
ENSLBEG00000013492CPSF39988.939ENSPNYG00000004405cpsf39688.939Pundamilia_nyererei
ENSLBEG00000013492CPSF38997.064ENSPNYG00000021047CPSF39289.091Pundamilia_nyererei
ENSLBEG00000013492CPSF39990.274ENSPNAG00000023060cpsf39590.274Pygocentrus_nattereri
ENSLBEG00000013492CPSF39888.735ENSRNOG00000052418Cpsf39588.735Rattus_norvegicus
ENSLBEG00000013492CPSF39883.796ENSRBIG00000041615CPSF39484.853Rhinopithecus_bieti
ENSLBEG00000013492CPSF39889.043ENSRROG00000033792CPSF39589.043Rhinopithecus_roxellana
ENSLBEG00000013492CPSF38843.247YLR277CYSH18543.247Saccharomyces_cerevisiae
ENSLBEG00000013492CPSF39685.266ENSSBOG00000027263CPSF39285.266Saimiri_boliviensis_boliviensis
ENSLBEG00000013492CPSF39889.198ENSSHAG00000007024CPSF39589.198Sarcophilus_harrisii
ENSLBEG00000013492CPSF39991.629ENSSFOG00015002108cpsf39591.681Scleropages_formosus
ENSLBEG00000013492CPSF39994.689ENSSMAG00000020534CPSF39794.689Scophthalmus_maximus
ENSLBEG00000013492CPSF39997.412ENSSDUG00000018498CPSF39597.412Seriola_dumerili
ENSLBEG00000013492CPSF39988.889ENSSDUG00000002828cpsf39388.889Seriola_dumerili
ENSLBEG00000013492CPSF39988.889ENSSLDG00000008469cpsf39392.333Seriola_lalandi_dorsalis
ENSLBEG00000013492CPSF39997.412ENSSLDG00000005234CPSF39597.412Seriola_lalandi_dorsalis
ENSLBEG00000013492CPSF38883.992ENSSARG00000005186CPSF38583.992Sorex_araneus
ENSLBEG00000013492CPSF39686.520ENSSPUG00000015525CPSF39386.520Sphenodon_punctatus
ENSLBEG00000013492CPSF39989.193ENSSPAG00000018579cpsf39689.193Stegastes_partitus
ENSLBEG00000013492CPSF39997.260ENSSPAG00000002906CPSF39597.260Stegastes_partitus
ENSLBEG00000013492CPSF39889.352ENSSSCG00000020799CPSF39589.352Sus_scrofa
ENSLBEG00000013492CPSF39888.479ENSTGUG00000013016CPSF39588.479Taeniopygia_guttata
ENSLBEG00000013492CPSF35680.376ENSTRUG00000013905CPSF39180.376Takifugu_rubripes
ENSLBEG00000013492CPSF39988.432ENSTRUG00000007030cpsf39488.432Takifugu_rubripes
ENSLBEG00000013492CPSF37091.989ENSTBEG00000002707CPSF37191.989Tupaia_belangeri
ENSLBEG00000013492CPSF38574.939ENSTTRG00000000861CPSF38274.939Tursiops_truncatus
ENSLBEG00000013492CPSF39889.352ENSUAMG00000007535CPSF39389.352Ursus_americanus
ENSLBEG00000013492CPSF39388.925ENSUMAG00000003676CPSF39492.844Ursus_maritimus
ENSLBEG00000013492CPSF39687.855ENSVPAG00000008041CPSF310087.855Vicugna_pacos
ENSLBEG00000013492CPSF39889.352ENSVVUG00000002194CPSF39589.352Vulpes_vulpes
ENSLBEG00000013492CPSF39986.778ENSXETG00000008263cpsf39586.778Xenopus_tropicalis
ENSLBEG00000013492CPSF35193.215ENSXCOG00000000957-7993.215Xiphophorus_couchianus
ENSLBEG00000013492CPSF39988.280ENSXCOG00000019695cpsf39688.280Xiphophorus_couchianus
ENSLBEG00000013492CPSF39995.890ENSXMAG00000027291CPSF39595.890Xiphophorus_maculatus
ENSLBEG00000013492CPSF39988.128ENSXMAG00000009784cpsf39688.128Xiphophorus_maculatus

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