EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000013509 (Gene tree)
Gene ID: 110002461
Gene Symbol: -
Alias: -
Full Name: uncharacterized protein CXorf23-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 13508 bases
Position: chrFKLU01000965.1:6398-19905
Accession: 110002461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000017523	THRAP3_BCLAF1	PF15440.6	9.9e-21	1	1
ENSLBEP00000017544	THRAP3_BCLAF1	PF15440.6	5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000018530	-	2310	XM_020658061	ENSLBEP00000017544	743 (aa)	XP_020513717	UPI0009B4D747
ENSLBET00000018508	-	2443	XM_020658063	ENSLBEP00000017523	709 (aa)	XP_020513719	UPI0009B4E065

Gene Model

Click here to download ENSLBEG00000013509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013509's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000013509	-	72	100.000	ENSLBEG00000017147	-	98	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000013509	-	100	59.761	ENSAPOG00000005256	-	100	59.363	Acanthochromis_polyacanthus
ENSLBEG00000013509	-	100	60.027	ENSAOCG00000015540	-	99	71.605	Amphiprion_ocellaris
ENSLBEG00000013509	-	100	59.363	ENSAPEG00000005388	-	99	70.782	Amphiprion_percula
ENSLBEG00000013509	-	100	61.496	ENSATEG00000021059	-	100	61.640	Anabas_testudineus
ENSLBEG00000013509	-	100	57.314	ENSACLG00000015521	-	100	57.124	Astatotilapia_calliptera
ENSLBEG00000013509	-	97	47.826	ENSCVAG00000016438	-	98	47.035	Cyprinodon_variegatus
ENSLBEG00000013509	-	57	46.512	ENSELUG00000012313	-	100	37.629	Esox_lucius
ENSLBEG00000013509	-	95	50.651	ENSFHEG00000006117	-	92	50.290	Fundulus_heteroclitus
ENSLBEG00000013509	-	100	51.592	ENSKMAG00000011858	-	99	65.975	Kryptolebias_marmoratus
ENSLBEG00000013509	-	100	57.314	ENSMZEG00005020613	-	95	64.583	Maylandia_zebra
ENSLBEG00000013509	-	73	59.273	ENSMALG00000017681	-	97	71.311	Monopterus_albus
ENSLBEG00000013509	-	97	46.238	ENSORLG00000003192	-	91	45.554	Oryzias_latipes
ENSLBEG00000013509	-	97	46.101	ENSORLG00020011477	-	92	45.691	Oryzias_latipes_hni
ENSLBEG00000013509	-	97	46.375	ENSORLG00015008021	-	91	45.964	Oryzias_latipes_hsok
ENSLBEG00000013509	-	100	46.809	ENSOMEG00000006057	-	94	61.864	Oryzias_melastigma
ENSLBEG00000013509	-	100	46.255	ENSPFOG00000002366	-	100	45.789	Poecilia_formosa
ENSLBEG00000013509	-	100	46.255	ENSPLAG00000011747	-	100	45.789	Poecilia_latipinna
ENSLBEG00000013509	-	100	46.255	ENSPMEG00000005281	-	100	45.395	Poecilia_mexicana
ENSLBEG00000013509	-	100	45.921	ENSPREG00000011406	-	100	45.072	Poecilia_reticulata
ENSLBEG00000013509	-	100	58.915	ENSSMAG00000009714	-	99	68.462	Scophthalmus_maximus
ENSLBEG00000013509	-	99	66.844	ENSSDUG00000004371	-	98	66.667	Seriola_dumerili
ENSLBEG00000013509	-	100	66.578	ENSSLDG00000008459	-	100	76.113	Seriola_lalandi_dorsalis
ENSLBEG00000013509	-	95	60.380	ENSSPAG00000017763	-	99	72.199	Stegastes_partitus
ENSLBEG00000013509	-	99	47.051	ENSTRUG00000021930	-	98	46.143	Takifugu_rubripes
ENSLBEG00000013509	-	100	46.335	ENSXMAG00000010229	-	100	46.797	Xiphophorus_maculatus