EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000013512 (Gene tree)
Gene ID: 109993123
Gene Symbol: rreb1a
Alias: id:ibd1338|si:ch211-266d19.3
Full Name: ras responsive element binding protein 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 29047 bases
Position: chrFKLU01000248.1:14990-44036
Accession: 109993123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000017613	zf-C2H2	PF00096.26	7.8e-32	1	6
ENSLBEP00000017613	zf-C2H2	PF00096.26	7.8e-32	2	6
ENSLBEP00000017613	zf-C2H2	PF00096.26	7.8e-32	3	6
ENSLBEP00000017613	zf-C2H2	PF00096.26	7.8e-32	4	6
ENSLBEP00000017613	zf-C2H2	PF00096.26	7.8e-32	5	6
ENSLBEP00000017613	zf-C2H2	PF00096.26	7.8e-32	6	6
ENSLBEP00000017558	zf-C2H2	PF00096.26	1.1e-24	1	4
ENSLBEP00000017558	zf-C2H2	PF00096.26	1.1e-24	2	4
ENSLBEP00000017558	zf-C2H2	PF00096.26	1.1e-24	3	4
ENSLBEP00000017558	zf-C2H2	PF00096.26	1.1e-24	4	4
ENSLBEP00000017613	zf-met	PF12874.7	7.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000018545	-	5619	XM_020645931	ENSLBEP00000017558	1593 (aa)	XP_020501587	-
ENSLBET00000018601	-	4596	-	ENSLBEP00000017613	1531 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000013512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013512's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000013512	rreb1a	50	48.148	ENSLBEG00000013570	-	97	53.061
ENSLBEG00000013512	rreb1a	56	47.170	ENSLBEG00000001132	-	68	34.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000013512	rreb1a	85	50.980	ENSG00000124782	RREB1	93	62.092	Homo_sapiens
ENSLBEG00000013512	rreb1a	83	45.000	ENSAPLG00000004726	RREB1	78	57.273	Anas_platyrhynchos
ENSLBEG00000013512	rreb1a	90	49.020	ENSACAG00000000520	RREB1	85	43.707	Anolis_carolinensis
ENSLBEG00000013512	rreb1a	92	50.980	ENSANAG00000029040	RREB1	93	55.714	Aotus_nancymaae
ENSLBEG00000013512	rreb1a	91	49.539	ENSAMXG00000015314	rreb1b	73	68.539	Astyanax_mexicanus
ENSLBEG00000013512	rreb1a	99	52.922	ENSAMXG00000019028	rreb1a	95	53.328	Astyanax_mexicanus
ENSLBEG00000013512	rreb1a	77	50.980	ENSCJAG00000021358	RREB1	94	57.143	Callithrix_jacchus
ENSLBEG00000013512	rreb1a	90	49.020	ENSCAFG00000009527	RREB1	94	50.000	Canis_familiaris
ENSLBEG00000013512	rreb1a	89	49.020	ENSCAFG00020013260	RREB1	80	61.616	Canis_lupus_dingo
ENSLBEG00000013512	rreb1a	92	50.980	ENSCCAG00000021905	RREB1	94	57.143	Cebus_capucinus
ENSLBEG00000013512	rreb1a	83	48.099	ENSCATG00000043662	RREB1	93	57.143	Cercocebus_atys
ENSLBEG00000013512	rreb1a	77	50.980	ENSCSAG00000007376	RREB1	89	50.980	Chlorocebus_sabaeus
ENSLBEG00000013512	rreb1a	99	49.020	ENSCPBG00000008709	RREB1	78	59.048	Chrysemys_picta_bellii
ENSLBEG00000013512	rreb1a	77	50.980	ENSCANG00000032835	RREB1	93	57.143	Colobus_angolensis_palliatus
ENSLBEG00000013512	rreb1a	99	69.165	ENSCSEG00000018342	rreb1a	89	68.150	Cynoglossus_semilaevis
ENSLBEG00000013512	rreb1a	99	52.941	ENSDARG00000063701	rreb1a	90	62.712	Danio_rerio
ENSLBEG00000013512	rreb1a	93	50.980	ENSDORG00000006979	Rreb1	98	46.154	Dipodomys_ordii
ENSLBEG00000013512	rreb1a	90	49.020	ENSEASG00005012054	RREB1	89	49.020	Equus_asinus_asinus
ENSLBEG00000013512	rreb1a	99	41.274	ENSECAG00000018169	RREB1	89	49.020	Equus_caballus
ENSLBEG00000013512	rreb1a	90	49.020	ENSFALG00000013231	RREB1	88	49.020	Ficedula_albicollis
ENSLBEG00000013512	rreb1a	79	50.980	ENSFDAG00000004213	RREB1	78	50.980	Fukomys_damarensis
ENSLBEG00000013512	rreb1a	99	45.309	ENSGALG00000012799	RREB1	80	45.000	Gallus_gallus
ENSLBEG00000013512	rreb1a	97	49.020	ENSGAGG00000002213	RREB1	89	49.020	Gopherus_agassizii
ENSLBEG00000013512	rreb1a	78	50.980	ENSGGOG00000004561	RREB1	93	52.703	Gorilla_gorilla
ENSLBEG00000013512	rreb1a	93	49.020	ENSLACG00000009283	RREB1	79	89.831	Latimeria_chalumnae
ENSLBEG00000013512	rreb1a	87	54.128	ENSLOCG00000011702	rreb1b	81	67.890	Lepisosteus_oculatus
ENSLBEG00000013512	rreb1a	90	50.980	ENSLAFG00000005300	RREB1	89	50.980	Loxodonta_africana
ENSLBEG00000013512	rreb1a	83	48.099	ENSMFAG00000000389	RREB1	93	57.143	Macaca_fascicularis
ENSLBEG00000013512	rreb1a	94	50.980	ENSMMUG00000007852	RREB1	93	57.143	Macaca_mulatta
ENSLBEG00000013512	rreb1a	83	48.099	ENSMNEG00000038556	RREB1	93	57.143	Macaca_nemestrina
ENSLBEG00000013512	rreb1a	83	48.099	ENSMLEG00000040965	RREB1	93	57.143	Mandrillus_leucophaeus
ENSLBEG00000013512	rreb1a	90	45.388	ENSMGAG00000003910	RREB1	87	45.350	Meleagris_gallopavo
ENSLBEG00000013512	rreb1a	92	50.980	ENSMICG00000003683	RREB1	94	57.143	Microcebus_murinus
ENSLBEG00000013512	rreb1a	99	49.020	ENSMODG00000009892	RREB1	88	49.020	Monodelphis_domestica
ENSLBEG00000013512	rreb1a	99	49.020	ENSMPUG00000000558	RREB1	89	49.020	Mustela_putorius_furo
ENSLBEG00000013512	rreb1a	87	47.059	ENSMLUG00000013153	RREB1	90	47.059	Myotis_lucifugus
ENSLBEG00000013512	rreb1a	91	50.980	ENSNGAG00000021506	Rreb1	81	63.208	Nannospalax_galili
ENSLBEG00000013512	rreb1a	69	80.214	ENSNBRG00000016744	rreb1a	99	68.165	Neolamprologus_brichardi
ENSLBEG00000013512	rreb1a	88	50.980	ENSNLEG00000011554	RREB1	93	54.054	Nomascus_leucogenys
ENSLBEG00000013512	rreb1a	90	49.020	ENSMEUG00000015377	RREB1	89	49.020	Notamacropus_eugenii
ENSLBEG00000013512	rreb1a	78	50.980	ENSOPRG00000001966	RREB1	75	50.980	Ochotona_princeps
ENSLBEG00000013512	rreb1a	89	50.980	ENSODEG00000007124	RREB1	90	50.980	Octodon_degus
ENSLBEG00000013512	rreb1a	98	69.019	ENSOMEG00000001389	rreb1a	96	69.111	Oryzias_melastigma
ENSLBEG00000013512	rreb1a	94	50.980	ENSOGAG00000025755	RREB1	92	50.980	Otolemur_garnettii
ENSLBEG00000013512	rreb1a	78	50.980	ENSPPAG00000037017	RREB1	93	52.703	Pan_paniscus
ENSLBEG00000013512	rreb1a	90	49.020	ENSPPRG00000012144	RREB1	81	61.321	Panthera_pardus
ENSLBEG00000013512	rreb1a	78	50.980	ENSPTRG00000017697	RREB1	93	52.703	Pan_troglodytes
ENSLBEG00000013512	rreb1a	83	47.996	ENSPANG00000019553	RREB1	93	57.143	Papio_anubis
ENSLBEG00000013512	rreb1a	87	50.980	ENSPKIG00000006372	rreb1b	89	50.980	Paramormyrops_kingsleyae
ENSLBEG00000013512	rreb1a	99	45.521	ENSPSIG00000006582	RREB1	78	58.491	Pelodiscus_sinensis
ENSLBEG00000013512	rreb1a	94	50.980	ENSPEMG00000014153	Rreb1	90	50.980	Peromyscus_maniculatus_bairdii
ENSLBEG00000013512	rreb1a	97	49.020	ENSPCIG00000012644	RREB1	89	49.020	Phascolarctos_cinereus
ENSLBEG00000013512	rreb1a	78	50.980	ENSPPYG00000016204	RREB1	89	50.980	Pongo_abelii
ENSLBEG00000013512	rreb1a	89	55.714	ENSPCOG00000014821	RREB1	94	55.714	Propithecus_coquereli
ENSLBEG00000013512	rreb1a	90	47.059	ENSPVAG00000014081	RREB1	79	61.616	Pteropus_vampyrus
ENSLBEG00000013512	rreb1a	99	50.980	ENSPNAG00000000486	rreb1a	92	54.309	Pygocentrus_nattereri
ENSLBEG00000013512	rreb1a	93	50.980	ENSRNOG00000015701	Rreb1	89	50.980	Rattus_norvegicus
ENSLBEG00000013512	rreb1a	77	50.980	ENSRROG00000039603	RREB1	93	57.143	Rhinopithecus_roxellana
ENSLBEG00000013512	rreb1a	90	50.980	ENSSBOG00000025257	RREB1	94	57.143	Saimiri_boliviensis_boliviensis
ENSLBEG00000013512	rreb1a	99	49.020	ENSSHAG00000005295	RREB1	93	53.846	Sarcophilus_harrisii
ENSLBEG00000013512	rreb1a	88	52.311	ENSSFOG00015001117	rreb1b	83	52.716	Scleropages_formosus
ENSLBEG00000013512	rreb1a	99	50.980	ENSSPUG00000007686	RREB1	79	59.223	Sphenodon_punctatus
ENSLBEG00000013512	rreb1a	90	45.000	ENSTGUG00000002309	RREB1	87	59.813	Taeniopygia_guttata
ENSLBEG00000013512	rreb1a	92	49.020	ENSUAMG00000003741	RREB1	91	49.020	Ursus_americanus
ENSLBEG00000013512	rreb1a	89	49.020	ENSVVUG00000005050	RREB1	78	61.616	Vulpes_vulpes
ENSLBEG00000013512	rreb1a	89	49.020	ENSXETG00000015435	rreb1	82	79.104	Xenopus_tropicalis