EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000013565 (Gene tree)
Gene ID: 109977106
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC109977106
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 4086 bases
Position: chrFKLU01004968.1:7378-11463
Accession: 109977106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000017589	RVT_1	PF00078.27	1.3e-19	1	1
ENSLBEP00000017589	RNase_H	PF00075.24	7.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000018576	-	4086	XM_020626971	ENSLBEP00000017589	1361 (aa)	XP_020482627	UPI0009B47203

Gene Model

Click here to download ENSLBEG00000013565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000013565	-	66	38.755	ENSAPEG00000000438	-	99	38.755	Amphiprion_percula
ENSLBEG00000013565	-	80	38.805	ENSACLG00000014318	-	81	38.805	Astatotilapia_calliptera
ENSLBEG00000013565	-	82	36.140	ENSACLG00000023027	-	89	36.140	Astatotilapia_calliptera
ENSLBEG00000013565	-	50	39.857	ENSACLG00000005138	-	75	39.655	Astatotilapia_calliptera
ENSLBEG00000013565	-	99	34.405	ENSACLG00000006254	-	95	34.136	Astatotilapia_calliptera
ENSLBEG00000013565	-	99	33.861	ENSACLG00000003782	-	98	33.788	Astatotilapia_calliptera
ENSLBEG00000013565	-	87	33.251	ENSAMXG00000033455	-	98	33.251	Astyanax_mexicanus
ENSLBEG00000013565	-	76	46.398	ENSAMXG00000040526	-	95	43.679	Astyanax_mexicanus
ENSLBEG00000013565	-	63	38.014	ENSAMXG00000038483	-	66	38.014	Astyanax_mexicanus
ENSLBEG00000013565	-	75	40.812	ENSAMXG00000033060	-	87	40.812	Astyanax_mexicanus
ENSLBEG00000013565	-	65	40.202	ENSBTAG00000052165	-	88	40.112	Bos_taurus
ENSLBEG00000013565	-	69	49.626	ENSCPBG00000009184	-	100	49.626	Chrysemys_picta_bellii
ENSLBEG00000013565	-	56	37.810	ENSCPBG00000009921	-	98	37.549	Chrysemys_picta_bellii
ENSLBEG00000013565	-	75	36.119	ENSCSEG00000009059	-	82	35.639	Cynoglossus_semilaevis
ENSLBEG00000013565	-	75	36.119	ENSCSEG00000011566	-	82	35.639	Cynoglossus_semilaevis
ENSLBEG00000013565	-	75	36.119	ENSCSEG00000012922	-	82	35.639	Cynoglossus_semilaevis
ENSLBEG00000013565	-	94	39.337	ENSCSEG00000019226	-	72	39.111	Cynoglossus_semilaevis
ENSLBEG00000013565	-	75	36.119	ENSCSEG00000013867	-	82	35.639	Cynoglossus_semilaevis
ENSLBEG00000013565	-	75	36.119	ENSCSEG00000018136	-	82	35.639	Cynoglossus_semilaevis
ENSLBEG00000013565	-	75	39.544	ENSECAG00000034459	-	93	39.544	Equus_caballus
ENSLBEG00000013565	-	64	38.436	ENSGALG00000053504	-	94	38.212	Gallus_gallus
ENSLBEG00000013565	-	68	38.242	ENSGALG00000050905	-	99	38.030	Gallus_gallus
ENSLBEG00000013565	-	89	33.360	ENSMAMG00000010978	-	98	33.279	Mastacembelus_armatus
ENSLBEG00000013565	-	51	48.200	ENSMODG00000028686	-	96	48.513	Monodelphis_domestica
ENSLBEG00000013565	-	57	47.826	ENSMODG00000027448	-	97	47.826	Monodelphis_domestica
ENSLBEG00000013565	-	75	43.356	ENSMODG00000029740	-	92	43.356	Monodelphis_domestica
ENSLBEG00000013565	-	61	43.106	ENSMODG00000028504	-	93	43.106	Monodelphis_domestica
ENSLBEG00000013565	-	55	43.883	ENSMODG00000027664	-	98	44.149	Monodelphis_domestica
ENSLBEG00000013565	-	76	43.947	ENSMODG00000027661	-	89	43.947	Monodelphis_domestica
ENSLBEG00000013565	-	80	47.826	ENSMODG00000029698	-	97	47.826	Monodelphis_domestica
ENSLBEG00000013565	-	52	43.441	ENSMODG00000029806	-	99	43.441	Monodelphis_domestica
ENSLBEG00000013565	-	52	43.441	ENSMODG00000028191	-	99	43.441	Monodelphis_domestica
ENSLBEG00000013565	-	53	44.550	ENSMODG00000028692	-	100	44.823	Monodelphis_domestica
ENSLBEG00000013565	-	80	47.826	ENSMODG00000028573	-	97	47.826	Monodelphis_domestica
ENSLBEG00000013565	-	52	43.300	ENSMODG00000027329	-	99	43.300	Monodelphis_domestica
ENSLBEG00000013565	-	55	44.828	ENSMODG00000029316	-	90	45.093	Monodelphis_domestica
ENSLBEG00000013565	-	75	44.015	ENSMODG00000029722	-	93	44.155	Monodelphis_domestica
ENSLBEG00000013565	-	80	47.826	ENSMODG00000027641	-	97	47.826	Monodelphis_domestica
ENSLBEG00000013565	-	80	47.826	ENSMODG00000028385	-	97	47.826	Monodelphis_domestica
ENSLBEG00000013565	-	61	42.788	ENSMODG00000027851	-	98	42.788	Monodelphis_domestica
ENSLBEG00000013565	-	52	43.724	ENSMODG00000029516	-	99	43.724	Monodelphis_domestica
ENSLBEG00000013565	-	83	44.208	ENSMODG00000027428	-	92	44.348	Monodelphis_domestica
ENSLBEG00000013565	-	53	40.417	ENSONIG00000021274	-	99	40.083	Oreochromis_niloticus
ENSLBEG00000013565	-	87	34.326	ENSONIG00000021180	-	98	34.326	Oreochromis_niloticus
ENSLBEG00000013565	-	73	35.064	ENSORLG00020007796	-	66	34.966	Oryzias_latipes_hni
ENSLBEG00000013565	-	99	40.485	ENSOMEG00000021132	-	97	40.455	Oryzias_melastigma
ENSLBEG00000013565	-	64	45.610	ENSOMEG00000005516	-	98	46.250	Oryzias_melastigma
ENSLBEG00000013565	-	58	39.152	ENSOARG00000014856	-	88	39.152	Ovis_aries
ENSLBEG00000013565	-	58	39.152	ENSOARG00000009849	-	87	39.152	Ovis_aries
ENSLBEG00000013565	-	50	42.031	ENSOARG00000015221	-	84	42.031	Ovis_aries
ENSLBEG00000013565	-	50	39.049	ENSOARG00000001648	-	95	39.049	Ovis_aries
ENSLBEG00000013565	-	74	42.732	ENSPSIG00000001866	-	90	42.732	Pelodiscus_sinensis
ENSLBEG00000013565	-	73	31.554	ENSPSIG00000012903	-	85	31.758	Pelodiscus_sinensis
ENSLBEG00000013565	-	76	40.758	ENSSSCG00000034853	-	89	40.758	Sus_scrofa
ENSLBEG00000013565	-	60	35.518	ENSXMAG00000024544	-	87	35.042	Xiphophorus_maculatus
ENSLBEG00000013565	-	99	35.456	ENSXMAG00000022532	-	96	35.456	Xiphophorus_maculatus