EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000013647 (Gene tree)
Gene ID: 109978875
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5945 bases
Position: chrFKLU01000021.1:2174982-2180926
Accession: 109978875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000017695	RRM_1	PF00076.22	3.7e-30	1	2
ENSLBEP00000017695	RRM_1	PF00076.22	3.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000018684	-	1328	XM_020628066	ENSLBEP00000017695	295 (aa)	XP_020483722	UPI0009B47028

Gene Model

Click here to download ENSLBEG00000013647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013647's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000013647	srsf5b	61	39.785	ENSLBEG00000017430	srsf9	71	42.632
ENSLBEG00000013647	srsf5b	58	45.143	ENSLBEG00000015294	-	65	47.126
ENSLBEG00000013647	srsf5b	58	45.714	ENSLBEG00000020864	-	68	43.169
ENSLBEG00000013647	srsf5b	61	52.941	ENSLBEG00000007356	srsf6a	50	60.773
ENSLBEG00000013647	srsf5b	70	64.019	ENSLBEG00000017153	srsf5a	74	67.005

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000013647	srsf5b	63	82.353	ENSG00000100650	SRSF5	98	73.846	Homo_sapiens
ENSLBEG00000013647	srsf5b	100	95.593	ENSAPOG00000008642	srsf5b	100	95.593	Acanthochromis_polyacanthus
ENSLBEG00000013647	srsf5b	63	82.353	ENSAMEG00000014574	SRSF5	67	82.723	Ailuropoda_melanoleuca
ENSLBEG00000013647	srsf5b	100	94.576	ENSACIG00000010742	srsf5b	100	94.237	Amphilophus_citrinellus
ENSLBEG00000013647	srsf5b	100	95.593	ENSAOCG00000005719	srsf5b	100	95.593	Amphiprion_ocellaris
ENSLBEG00000013647	srsf5b	100	95.593	ENSAPEG00000007830	srsf5b	100	95.593	Amphiprion_percula
ENSLBEG00000013647	srsf5b	92	94.834	ENSATEG00000019112	srsf5b	100	94.576	Anabas_testudineus
ENSLBEG00000013647	srsf5b	61	81.111	ENSAPLG00000014681	SRSF5	69	79.058	Anas_platyrhynchos
ENSLBEG00000013647	srsf5b	63	81.818	ENSACAG00000005143	SRSF5	69	82.723	Anolis_carolinensis
ENSLBEG00000013647	srsf5b	66	81.122	ENSANAG00000027977	-	73	91.667	Aotus_nancymaae
ENSLBEG00000013647	srsf5b	100	94.576	ENSACLG00000026424	srsf5b	100	94.237	Astatotilapia_calliptera
ENSLBEG00000013647	srsf5b	65	91.099	ENSAMXG00000011932	srsf5b	84	93.077	Astyanax_mexicanus
ENSLBEG00000013647	srsf5b	63	82.353	ENSBTAG00000011596	SRSF5	67	82.723	Bos_taurus
ENSLBEG00000013647	srsf5b	63	82.353	ENSCJAG00000014884	SRSF5	73	91.667	Callithrix_jacchus
ENSLBEG00000013647	srsf5b	63	82.353	ENSCAFG00000016589	SRSF5	67	82.723	Canis_familiaris
ENSLBEG00000013647	srsf5b	63	82.353	ENSCAFG00020005661	SRSF5	67	82.723	Canis_lupus_dingo
ENSLBEG00000013647	srsf5b	63	82.353	ENSCHIG00000016794	SRSF5	66	82.723	Capra_hircus
ENSLBEG00000013647	srsf5b	63	82.353	ENSTSYG00000007786	SRSF5	99	66.667	Carlito_syrichta
ENSLBEG00000013647	srsf5b	63	82.353	ENSCAPG00000008801	SRSF5	66	82.723	Cavia_aperea
ENSLBEG00000013647	srsf5b	63	82.353	ENSCPOG00000039926	SRSF5	66	82.723	Cavia_porcellus
ENSLBEG00000013647	srsf5b	66	81.122	ENSCCAG00000029002	SRSF5	73	91.667	Cebus_capucinus
ENSLBEG00000013647	srsf5b	66	81.122	ENSCATG00000045051	SRSF5	73	91.667	Cercocebus_atys
ENSLBEG00000013647	srsf5b	63	82.353	ENSCLAG00000004755	SRSF5	67	82.723	Chinchilla_lanigera
ENSLBEG00000013647	srsf5b	63	82.353	ENSCSAG00000013041	SRSF5	67	82.723	Chlorocebus_sabaeus
ENSLBEG00000013647	srsf5b	63	81.818	ENSCPBG00000021653	SRSF5	68	82.199	Chrysemys_picta_bellii
ENSLBEG00000013647	srsf5b	66	81.122	ENSCANG00000030560	SRSF5	73	91.667	Colobus_angolensis_palliatus
ENSLBEG00000013647	srsf5b	63	82.353	ENSCGRG00001015339	Srsf5	68	82.723	Cricetulus_griseus_chok1gshd
ENSLBEG00000013647	srsf5b	63	82.353	ENSCGRG00000009833	Srsf5	68	82.723	Cricetulus_griseus_crigri
ENSLBEG00000013647	srsf5b	85	93.600	ENSCSEG00000003801	srsf5b	100	91.186	Cynoglossus_semilaevis
ENSLBEG00000013647	srsf5b	93	85.223	ENSCVAG00000017240	srsf5b	88	82.699	Cyprinodon_variegatus
ENSLBEG00000013647	srsf5b	63	91.444	ENSDARG00000027734	srsf5b	90	92.308	Danio_rerio
ENSLBEG00000013647	srsf5b	63	82.353	ENSDNOG00000006160	SRSF5	68	82.723	Dasypus_novemcinctus
ENSLBEG00000013647	srsf5b	63	82.353	ENSDORG00000003989	Srsf5	68	82.723	Dipodomys_ordii
ENSLBEG00000013647	srsf5b	63	77.957	ENSETEG00000020396	SRSF5	68	77.895	Echinops_telfairi
ENSLBEG00000013647	srsf5b	85	56.641	ENSEBUG00000006229	srsf5b	69	61.658	Eptatretus_burgeri
ENSLBEG00000013647	srsf5b	63	82.353	ENSEASG00005016615	SRSF5	67	82.723	Equus_asinus_asinus
ENSLBEG00000013647	srsf5b	63	82.353	ENSECAG00000026873	SRSF5	88	73.846	Equus_caballus
ENSLBEG00000013647	srsf5b	92	75.658	ENSELUG00000019852	srsf5b	85	81.250	Esox_lucius
ENSLBEG00000013647	srsf5b	63	82.353	ENSFCAG00000008848	SRSF5	72	91.667	Felis_catus
ENSLBEG00000013647	srsf5b	63	81.720	ENSFALG00000004979	SRSF5	68	78.947	Ficedula_albicollis
ENSLBEG00000013647	srsf5b	63	82.353	ENSFDAG00000011562	SRSF5	68	82.723	Fukomys_damarensis
ENSLBEG00000013647	srsf5b	93	90.545	ENSFHEG00000009476	srsf5b	88	90.476	Fundulus_heteroclitus
ENSLBEG00000013647	srsf5b	64	77.876	ENSGMOG00000000595	srsf5b	99	76.991	Gadus_morhua
ENSLBEG00000013647	srsf5b	63	81.183	ENSGALG00000009421	SRSF5	88	74.615	Gallus_gallus
ENSLBEG00000013647	srsf5b	92	90.406	ENSGAFG00000002865	srsf5b	89	91.144	Gambusia_affinis
ENSLBEG00000013647	srsf5b	100	66.572	ENSGACG00000007834	srsf5b	86	86.029	Gasterosteus_aculeatus
ENSLBEG00000013647	srsf5b	63	81.818	ENSGAGG00000004447	SRSF5	68	82.199	Gopherus_agassizii
ENSLBEG00000013647	srsf5b	66	81.122	ENSGGOG00000016462	SRSF5	73	91.667	Gorilla_gorilla
ENSLBEG00000013647	srsf5b	100	94.237	ENSHBUG00000012462	srsf5b	100	93.898	Haplochromis_burtoni
ENSLBEG00000013647	srsf5b	63	81.818	ENSHGLG00000010147	SRSF5	67	82.199	Heterocephalus_glaber_female
ENSLBEG00000013647	srsf5b	81	48.315	ENSHGLG00100000095	-	62	58.791	Heterocephalus_glaber_male
ENSLBEG00000013647	srsf5b	63	81.818	ENSHGLG00100015328	SRSF5	67	82.199	Heterocephalus_glaber_male
ENSLBEG00000013647	srsf5b	64	86.979	ENSHCOG00000005592	srsf5b	66	86.458	Hippocampus_comes
ENSLBEG00000013647	srsf5b	63	82.353	ENSSTOG00000020672	SRSF5	67	82.723	Ictidomys_tridecemlineatus
ENSLBEG00000013647	srsf5b	63	82.353	ENSJJAG00000001688	Srsf5	67	82.723	Jaculus_jaculus
ENSLBEG00000013647	srsf5b	92	91.513	ENSKMAG00000020486	srsf5b	89	91.144	Kryptolebias_marmoratus
ENSLBEG00000013647	srsf5b	63	83.333	ENSLACG00000005874	SRSF5	68	82.105	Latimeria_chalumnae
ENSLBEG00000013647	srsf5b	63	82.723	ENSLOCG00000012438	srsf5b	70	80.513	Lepisosteus_oculatus
ENSLBEG00000013647	srsf5b	63	81.818	ENSLAFG00000005260	SRSF5	67	82.199	Loxodonta_africana
ENSLBEG00000013647	srsf5b	66	81.122	ENSMFAG00000002393	SRSF5	73	91.667	Macaca_fascicularis
ENSLBEG00000013647	srsf5b	66	81.122	ENSMNEG00000030872	SRSF5	73	91.667	Macaca_nemestrina
ENSLBEG00000013647	srsf5b	66	81.122	ENSMLEG00000030017	SRSF5	73	91.667	Mandrillus_leucophaeus
ENSLBEG00000013647	srsf5b	100	94.576	ENSMAMG00000002673	srsf5b	100	94.237	Mastacembelus_armatus
ENSLBEG00000013647	srsf5b	100	94.576	ENSMZEG00005003550	srsf5b	100	94.237	Maylandia_zebra
ENSLBEG00000013647	srsf5b	50	76.871	ENSMGAG00000011835	SRSF5	63	73.510	Meleagris_gallopavo
ENSLBEG00000013647	srsf5b	63	82.353	ENSMAUG00000009544	Srsf5	67	82.723	Mesocricetus_auratus
ENSLBEG00000013647	srsf5b	63	82.353	ENSMICG00000037432	-	73	91.667	Microcebus_murinus
ENSLBEG00000013647	srsf5b	63	82.353	ENSMOCG00000013134	Srsf5	67	82.723	Microtus_ochrogaster
ENSLBEG00000013647	srsf5b	70	86.408	ENSMMOG00000000137	srsf5b	80	93.939	Mola_mola
ENSLBEG00000013647	srsf5b	63	81.818	ENSMODG00000011362	SRSF5	68	82.199	Monodelphis_domestica
ENSLBEG00000013647	srsf5b	100	92.256	ENSMALG00000021875	srsf5b	100	94.949	Monopterus_albus
ENSLBEG00000013647	srsf5b	63	82.353	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSLBEG00000013647	srsf5b	63	82.353	MGP_PahariEiJ_G0029659	Srsf5	68	82.723	Mus_pahari
ENSLBEG00000013647	srsf5b	63	82.353	ENSMPUG00000007458	SRSF5	67	82.723	Mustela_putorius_furo
ENSLBEG00000013647	srsf5b	63	82.353	ENSMLUG00000011939	SRSF5	65	82.723	Myotis_lucifugus
ENSLBEG00000013647	srsf5b	63	82.353	ENSNGAG00000010073	-	67	82.723	Nannospalax_galili
ENSLBEG00000013647	srsf5b	100	91.525	ENSNBRG00000001285	srsf5b	100	94.237	Neolamprologus_brichardi
ENSLBEG00000013647	srsf5b	66	81.122	ENSNLEG00000001615	SRSF5	73	91.667	Nomascus_leucogenys
ENSLBEG00000013647	srsf5b	63	82.353	ENSOPRG00000008286	SRSF5	65	82.723	Ochotona_princeps
ENSLBEG00000013647	srsf5b	63	80.749	ENSODEG00000000700	-	69	80.628	Octodon_degus
ENSLBEG00000013647	srsf5b	63	82.353	ENSODEG00000013469	-	68	82.723	Octodon_degus
ENSLBEG00000013647	srsf5b	100	94.576	ENSONIG00000005759	srsf5b	100	94.237	Oreochromis_niloticus
ENSLBEG00000013647	srsf5b	63	77.540	ENSOANG00000013336	SRSF5	68	78.010	Ornithorhynchus_anatinus
ENSLBEG00000013647	srsf5b	63	82.353	ENSOCUG00000009274	SRSF5	66	82.723	Oryctolagus_cuniculus
ENSLBEG00000013647	srsf5b	100	79.751	ENSORLG00000029854	srsf5b	100	78.193	Oryzias_latipes
ENSLBEG00000013647	srsf5b	92	90.406	ENSORLG00015001720	srsf5b	100	89.492	Oryzias_latipes_hsok
ENSLBEG00000013647	srsf5b	93	89.781	ENSOMEG00000020690	srsf5b	67	89.668	Oryzias_melastigma
ENSLBEG00000013647	srsf5b	63	82.353	ENSOGAG00000015122	SRSF5	67	82.723	Otolemur_garnettii
ENSLBEG00000013647	srsf5b	66	81.122	ENSPPAG00000029921	SRSF5	73	91.667	Pan_paniscus
ENSLBEG00000013647	srsf5b	63	82.353	ENSPPRG00000012903	SRSF5	72	91.667	Panthera_pardus
ENSLBEG00000013647	srsf5b	63	82.353	ENSPTIG00000018589	SRSF5	72	91.667	Panthera_tigris_altaica
ENSLBEG00000013647	srsf5b	66	81.122	ENSPTRG00000006488	SRSF5	73	91.667	Pan_troglodytes
ENSLBEG00000013647	srsf5b	66	81.122	ENSPANG00000021091	SRSF5	73	91.667	Papio_anubis
ENSLBEG00000013647	srsf5b	63	81.818	ENSPSIG00000012522	SRSF5	69	82.199	Pelodiscus_sinensis
ENSLBEG00000013647	srsf5b	63	82.353	ENSPEMG00000020173	Srsf5	68	82.723	Peromyscus_maniculatus_bairdii
ENSLBEG00000013647	srsf5b	65	61.111	ENSPMAG00000007790	srsf5b	68	61.421	Petromyzon_marinus
ENSLBEG00000013647	srsf5b	63	81.818	ENSPCIG00000011877	SRSF5	68	82.199	Phascolarctos_cinereus
ENSLBEG00000013647	srsf5b	92	91.513	ENSPFOG00000017700	srsf5b	89	91.144	Poecilia_formosa
ENSLBEG00000013647	srsf5b	92	91.882	ENSPLAG00000006480	srsf5b	89	91.513	Poecilia_latipinna
ENSLBEG00000013647	srsf5b	92	91.513	ENSPMEG00000012751	srsf5b	84	97.692	Poecilia_mexicana
ENSLBEG00000013647	srsf5b	92	90.037	ENSPREG00000010381	srsf5b	89	91.144	Poecilia_reticulata
ENSLBEG00000013647	srsf5b	63	82.353	ENSPPYG00000005945	SRSF5	67	82.723	Pongo_abelii
ENSLBEG00000013647	srsf5b	52	79.355	ENSPCAG00000004405	SRSF5	100	77.273	Procavia_capensis
ENSLBEG00000013647	srsf5b	63	82.353	ENSPCOG00000014442	SRSF5	88	73.846	Propithecus_coquereli
ENSLBEG00000013647	srsf5b	100	86.441	ENSPNYG00000002669	srsf5b	94	97.692	Pundamilia_nyererei
ENSLBEG00000013647	srsf5b	65	90.576	ENSPNAG00000011262	srsf5b	84	92.308	Pygocentrus_nattereri
ENSLBEG00000013647	srsf5b	63	82.353	ENSRNOG00000005513	Srsf5	68	82.723	Rattus_norvegicus
ENSLBEG00000013647	srsf5b	66	81.122	ENSRBIG00000013003	SRSF5	73	91.667	Rhinopithecus_bieti
ENSLBEG00000013647	srsf5b	66	81.122	ENSRROG00000043407	SRSF5	73	91.667	Rhinopithecus_roxellana
ENSLBEG00000013647	srsf5b	66	81.122	ENSSBOG00000030784	SRSF5	73	91.667	Saimiri_boliviensis_boliviensis
ENSLBEG00000013647	srsf5b	63	81.818	ENSSHAG00000002871	SRSF5	68	82.199	Sarcophilus_harrisii
ENSLBEG00000013647	srsf5b	93	82.781	ENSSMAG00000019728	srsf5b	91	83.893	Scophthalmus_maximus
ENSLBEG00000013647	srsf5b	89	96.198	ENSSDUG00000005766	srsf5b	92	96.198	Seriola_dumerili
ENSLBEG00000013647	srsf5b	100	96.271	ENSSLDG00000023255	srsf5b	100	96.271	Seriola_lalandi_dorsalis
ENSLBEG00000013647	srsf5b	63	70.968	ENSSARG00000001059	SRSF5	67	68.586	Sorex_araneus
ENSLBEG00000013647	srsf5b	63	79.581	ENSSPUG00000002464	SRSF5	89	71.223	Sphenodon_punctatus
ENSLBEG00000013647	srsf5b	100	95.932	ENSSPAG00000015325	srsf5b	100	95.932	Stegastes_partitus
ENSLBEG00000013647	srsf5b	63	82.353	ENSSSCG00000032583	SRSF5	67	82.723	Sus_scrofa
ENSLBEG00000013647	srsf5b	63	81.720	ENSTGUG00000011425	SRSF5	68	78.947	Taeniopygia_guttata
ENSLBEG00000013647	srsf5b	64	90.000	ENSTRUG00000017811	srsf5b	95	76.412	Takifugu_rubripes
ENSLBEG00000013647	srsf5b	92	80.216	ENSTNIG00000016411	srsf5b	95	82.657	Tetraodon_nigroviridis
ENSLBEG00000013647	srsf5b	63	80.214	ENSTBEG00000001972	SRSF5	66	78.534	Tupaia_belangeri
ENSLBEG00000013647	srsf5b	63	82.258	ENSTTRG00000003318	SRSF5	66	82.632	Tursiops_truncatus
ENSLBEG00000013647	srsf5b	63	82.353	ENSUAMG00000014184	SRSF5	67	82.723	Ursus_americanus
ENSLBEG00000013647	srsf5b	63	93.548	ENSUMAG00000009827	SRSF5	67	82.723	Ursus_maritimus
ENSLBEG00000013647	srsf5b	63	82.353	ENSVPAG00000006448	SRSF5	67	82.723	Vicugna_pacos
ENSLBEG00000013647	srsf5b	63	82.353	ENSVVUG00000003790	SRSF5	67	82.723	Vulpes_vulpes
ENSLBEG00000013647	srsf5b	64	82.011	ENSXETG00000002211	srsf5	68	81.579	Xenopus_tropicalis
ENSLBEG00000013647	srsf5b	92	83.026	ENSXCOG00000001570	srsf5b	89	88.561	Xiphophorus_couchianus
ENSLBEG00000013647	srsf5b	92	91.513	ENSXMAG00000026416	srsf5b	84	98.462	Xiphophorus_maculatus