EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000013654 (Gene tree)
Gene ID
109992444
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Minus strand
Length
9330 bases
Position
chrFKLU01000231.1:586608-595937
Accession
109992444
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000017690PABPPF00658.186.3e-3111
ENSLBEP00000017690RRM_5PF13893.63.9e-0811
ENSLBEP00000017690RRM_1PF00076.223.2e-9014
ENSLBEP00000017690RRM_1PF00076.223.2e-9024
ENSLBEP00000017690RRM_1PF00076.223.2e-9034
ENSLBEP00000017690RRM_1PF00076.223.2e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000018679-3317XM_020645060ENSLBEP00000017690629 (aa)XP_020500716UPI0009B3B466
Gene Model
Click here to download ENSLBEG00000013654's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013654's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000013654pabpc49974.646ENSLBEG00000026845pabpc1b9974.173
ENSLBEG00000013654pabpc45936.145ENSLBEG00000027924ELAVL28536.145
ENSLBEG00000013654pabpc46033.333ENSLBEG00000002556-9633.333
ENSLBEG00000013654pabpc45936.145ENSLBEG00000008073elavl39236.145
ENSLBEG00000013654pabpc45339.535ENSLBEG00000010618-5239.535
ENSLBEG00000013654pabpc46041.772ENSLBEG00000008018-5240.476
ENSLBEG00000013654pabpc49766.190ENSLBEG00000010084pabpc1l9965.971
ENSLBEG00000013654pabpc49876.312ENSLBEG00000024002-9875.676
ENSLBEG00000013654pabpc45831.928ENSLBEG00000019073ncl5131.928
ENSLBEG00000013654pabpc46039.744ENSLBEG00000009909rbm39b7136.905
ENSLBEG00000013654pabpc46331.967ENSLBEG00000010843rbms2b7131.967
ENSLBEG00000013654pabpc46134.940ENSLBEG00000007096elavl48434.940
ENSLBEG00000013654pabpc46033.981ENSLBEG00000017716rbms2a6233.981
ENSLBEG00000013654pabpc46033.333ENSLBEG00000011642rbm459333.333
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000013654pabpc410083.651ENSG00000090621PABPC49996.396Homo_sapiens
ENSLBEG00000013654pabpc410096.661ENSAPOG00000001161pabpc410096.661Acanthochromis_polyacanthus
ENSLBEG00000013654pabpc49750.081ENSAMEG00000015083-9949.435Ailuropoda_melanoleuca
ENSLBEG00000013654pabpc410079.136ENSAMEG00000011535-10078.869Ailuropoda_melanoleuca
ENSLBEG00000013654pabpc410094.953ENSACIG00000023343pabpc410094.953Amphilophus_citrinellus
ENSLBEG00000013654pabpc410096.820ENSAOCG00000021529pabpc410096.820Amphiprion_ocellaris
ENSLBEG00000013654pabpc410096.820ENSAPEG00000019196pabpc410096.820Amphiprion_percula
ENSLBEG00000013654pabpc410096.190ENSATEG00000007402pabpc410096.190Anabas_testudineus
ENSLBEG00000013654pabpc49983.856ENSAPLG00000009729-10084.301Anas_platyrhynchos
ENSLBEG00000013654pabpc49884.425ENSACAG00000002544PABPC410083.717Anolis_carolinensis
ENSLBEG00000013654pabpc410082.143ENSANAG00000025079PABPC410082.582Aotus_nancymaae
ENSLBEG00000013654pabpc410095.556ENSACLG00000019558pabpc410095.556Astatotilapia_calliptera
ENSLBEG00000013654pabpc410085.446ENSAMXG00000018779pabpc410085.446Astyanax_mexicanus
ENSLBEG00000013654pabpc410080.945ENSBTAG00000017125PABPC410080.488Bos_taurus
ENSLBEG00000013654pabpc45883.929ENSBTAG00000048536-9383.929Bos_taurus
ENSLBEG00000013654pabpc410082.143ENSCJAG00000002512-10082.582Callithrix_jacchus
ENSLBEG00000013654pabpc47480.804ENSCJAG00000045953-8579.018Callithrix_jacchus
ENSLBEG00000013654pabpc410082.143ENSCAFG00000003081PABPC410082.426Canis_familiaris
ENSLBEG00000013654pabpc410079.285ENSCAFG00020004161PABPC410079.018Canis_lupus_dingo
ENSLBEG00000013654pabpc410064.923ENSCHIG00000023385-10064.462Capra_hircus
ENSLBEG00000013654pabpc410079.136ENSCHIG00000019398-10078.720Capra_hircus
ENSLBEG00000013654pabpc410083.204ENSTSYG00000006532PABPC410082.582Carlito_syrichta
ENSLBEG00000013654pabpc49981.692ENSCAPG00000015984PABPC410082.344Cavia_aperea
ENSLBEG00000013654pabpc410081.776ENSCPOG00000009552PABPC410082.426Cavia_porcellus
ENSLBEG00000013654pabpc410082.143ENSCCAG00000037306PABPC410082.582Cebus_capucinus
ENSLBEG00000013654pabpc410082.143ENSCATG00000042164PABPC410082.582Cercocebus_atys
ENSLBEG00000013654pabpc410081.776ENSCLAG00000011899PABPC410082.426Chinchilla_lanigera
ENSLBEG00000013654pabpc410079.583ENSCSAG00000001135PABPC410078.869Chlorocebus_sabaeus
ENSLBEG00000013654pabpc48688.947ENSCHOG00000005327PABPC47989.488Choloepus_hoffmanni
ENSLBEG00000013654pabpc49986.028ENSCPBG00000001038PABPC410085.400Chrysemys_picta_bellii
ENSLBEG00000013654pabpc49982.334ENSCANG00000034177PABPC410082.780Colobus_angolensis_palliatus
ENSLBEG00000013654pabpc49884.578ENSCGRG00001018166Pabpc410083.968Cricetulus_griseus_chok1gshd
ENSLBEG00000013654pabpc49784.818ENSCGRG00000009777Pabpc410084.194Cricetulus_griseus_crigri
ENSLBEG00000013654pabpc410095.556ENSCSEG00000000130pabpc410095.556Cynoglossus_semilaevis
ENSLBEG00000013654pabpc49895.440ENSCVAG00000019246pabpc49995.440Cyprinodon_variegatus
ENSLBEG00000013654pabpc49891.561ENSDARG00000059259pabpc410091.254Danio_rerio
ENSLBEG00000013654pabpc49980.944ENSDNOG00000018444-10081.261Dasypus_novemcinctus
ENSLBEG00000013654pabpc410081.126ENSDORG00000011581Pabpc410080.793Dipodomys_ordii
ENSLBEG00000013654pabpc410090.769ENSETEG00000018453-8490.769Echinops_telfairi
ENSLBEG00000013654pabpc48553.931ENSETEG00000009172-9953.297Echinops_telfairi
ENSLBEG00000013654pabpc49875.955ENSEBUG00000000992pabpc49975.637Eptatretus_burgeri
ENSLBEG00000013654pabpc49677.310ENSEBUG00000013782pabpc49976.667Eptatretus_burgeri
ENSLBEG00000013654pabpc410079.285ENSEASG00005014119PABPC410079.018Equus_asinus_asinus
ENSLBEG00000013654pabpc410079.285ENSECAG00000009396PABPC410079.018Equus_caballus
ENSLBEG00000013654pabpc49778.560ENSEEUG00000002962PABPC410077.794Erinaceus_europaeus
ENSLBEG00000013654pabpc49892.687ENSELUG00000003195pabpc410091.732Esox_lucius
ENSLBEG00000013654pabpc410082.143ENSFCAG00000015254-10082.426Felis_catus
ENSLBEG00000013654pabpc49984.748ENSFALG00000000543PABPC410084.591Ficedula_albicollis
ENSLBEG00000013654pabpc410079.495ENSFDAG00000020016-10079.167Fukomys_damarensis
ENSLBEG00000013654pabpc48852.017ENSFDAG00000010581-9950.000Fukomys_damarensis
ENSLBEG00000013654pabpc410094.921ENSFHEG00000007548pabpc410094.921Fundulus_heteroclitus
ENSLBEG00000013654pabpc49990.909ENSGMOG00000019025pabpc410090.909Gadus_morhua
ENSLBEG00000013654pabpc49984.724ENSGALG00000003800PABPC49985.489Gallus_gallus
ENSLBEG00000013654pabpc410093.365ENSGAFG00000018195pabpc49898.889Gambusia_affinis
ENSLBEG00000013654pabpc410093.651ENSGACG00000007179pabpc410093.651Gasterosteus_aculeatus
ENSLBEG00000013654pabpc49986.185ENSGAGG00000001888PABPC410085.557Gopherus_agassizii
ENSLBEG00000013654pabpc410082.143ENSGGOG00000004002PABPC410082.582Gorilla_gorilla
ENSLBEG00000013654pabpc410095.556ENSHBUG00000020206pabpc410095.556Haplochromis_burtoni
ENSLBEG00000013654pabpc410081.776ENSHGLG00000011162PABPC410082.426Heterocephalus_glaber_female
ENSLBEG00000013654pabpc410081.776ENSHGLG00100001580PABPC410082.426Heterocephalus_glaber_male
ENSLBEG00000013654pabpc410093.333ENSHCOG00000012694pabpc49994.286Hippocampus_comes
ENSLBEG00000013654pabpc49791.599ENSIPUG00000016620pabpc49991.125Ictalurus_punctatus
ENSLBEG00000013654pabpc410083.492ENSSTOG00000010416PABPC410083.651Ictidomys_tridecemlineatus
ENSLBEG00000013654pabpc410079.969ENSJJAG00000007781Pabpc410079.511Jaculus_jaculus
ENSLBEG00000013654pabpc49995.048ENSKMAG00000013597pabpc49995.048Kryptolebias_marmoratus
ENSLBEG00000013654pabpc49984.688ENSLACG00000011907PABPC410085.423Latimeria_chalumnae
ENSLBEG00000013654pabpc49990.063ENSLOCG00000001877pabpc49990.063Lepisosteus_oculatus
ENSLBEG00000013654pabpc410084.286ENSLAFG00000000151PABPC410083.968Loxodonta_africana
ENSLBEG00000013654pabpc410082.143ENSMFAG00000041481PABPC410082.582Macaca_fascicularis
ENSLBEG00000013654pabpc410079.583ENSMMUG00000007497PABPC410078.869Macaca_mulatta
ENSLBEG00000013654pabpc410082.143ENSMNEG00000043054PABPC410082.426Macaca_nemestrina
ENSLBEG00000013654pabpc410082.143ENSMLEG00000040716PABPC410082.582Mandrillus_leucophaeus
ENSLBEG00000013654pabpc49996.184ENSMAMG00000010025pabpc410096.184Mastacembelus_armatus
ENSLBEG00000013654pabpc410095.397ENSMZEG00005006141pabpc410095.397Maylandia_zebra
ENSLBEG00000013654pabpc49881.250ENSMGAG00000005408PABPC410081.619Meleagris_gallopavo
ENSLBEG00000013654pabpc45780.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSLBEG00000013654pabpc47278.571ENSMAUG00000001295-9777.619Mesocricetus_auratus
ENSLBEG00000013654pabpc47690.625ENSMAUG00000019763-8486.364Mesocricetus_auratus
ENSLBEG00000013654pabpc48884.477ENSMICG00000016633-10084.144Microcebus_murinus
ENSLBEG00000013654pabpc49974.866ENSMICG00000036729-10073.619Microcebus_murinus
ENSLBEG00000013654pabpc49883.819ENSMOCG00000006763Pabpc410083.016Microtus_ochrogaster
ENSLBEG00000013654pabpc49992.834ENSMMOG00000002363pabpc410091.879Mola_mola
ENSLBEG00000013654pabpc49782.949ENSMODG00000017657-10081.750Monodelphis_domestica
ENSLBEG00000013654pabpc45970.400ENSMODG00000018051-9670.400Monodelphis_domestica
ENSLBEG00000013654pabpc410095.728ENSMALG00000011017pabpc410095.728Monopterus_albus
ENSLBEG00000013654pabpc49870.508MGP_CAROLIEiJ_G0024864-10071.777Mus_caroli
ENSLBEG00000013654pabpc49978.657MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSLBEG00000013654pabpc410083.175ENSMUSG00000011257Pabpc410094.675Mus_musculus
ENSLBEG00000013654pabpc49978.733MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSLBEG00000013654pabpc49970.332MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSLBEG00000013654pabpc49446.623ENSMPUG00000006836-10046.217Mustela_putorius_furo
ENSLBEG00000013654pabpc410079.285ENSMPUG00000014414-10078.869Mustela_putorius_furo
ENSLBEG00000013654pabpc410083.492ENSMLUG00000012068PABPC410083.810Myotis_lucifugus
ENSLBEG00000013654pabpc410084.286ENSNGAG00000018292Pabpc410083.968Nannospalax_galili
ENSLBEG00000013654pabpc46596.386ENSNBRG00000010047-7296.386Neolamprologus_brichardi
ENSLBEG00000013654pabpc46098.077ENSNBRG00000009708pabpc49898.077Neolamprologus_brichardi
ENSLBEG00000013654pabpc410082.143ENSNLEG00000011928PABPC410082.582Nomascus_leucogenys
ENSLBEG00000013654pabpc48693.651ENSOPRG00000011984PABPC48793.651Ochotona_princeps
ENSLBEG00000013654pabpc45382.857ENSODEG00000013457-10082.857Octodon_degus
ENSLBEG00000013654pabpc410081.988ENSODEG00000006592-10081.960Octodon_degus
ENSLBEG00000013654pabpc49973.554ENSODEG00000017434-10072.727Octodon_degus
ENSLBEG00000013654pabpc410095.397ENSONIG00000008176pabpc410095.397Oreochromis_niloticus
ENSLBEG00000013654pabpc49985.400ENSOANG00000010001PABPC410084.772Ornithorhynchus_anatinus
ENSLBEG00000013654pabpc49580.251ENSOCUG00000000562PABPC48879.499Oryctolagus_cuniculus
ENSLBEG00000013654pabpc49895.385ENSORLG00000017479pabpc410095.385Oryzias_latipes
ENSLBEG00000013654pabpc49895.385ENSORLG00020018644pabpc410095.385Oryzias_latipes_hni
ENSLBEG00000013654pabpc49895.385ENSORLG00015015042pabpc410095.385Oryzias_latipes_hsok
ENSLBEG00000013654pabpc49895.000ENSOMEG00000014410pabpc410094.444Oryzias_melastigma
ENSLBEG00000013654pabpc410080.699ENSOGAG00000004067PABPC410080.395Otolemur_garnettii
ENSLBEG00000013654pabpc410079.136ENSOARG00000020060PABPC410078.720Ovis_aries
ENSLBEG00000013654pabpc410082.143ENSPPAG00000043625PABPC410082.582Pan_paniscus
ENSLBEG00000013654pabpc410082.143ENSPPRG00000024727PABPC410082.426Panthera_pardus
ENSLBEG00000013654pabpc410082.143ENSPTIG00000005829PABPC410082.426Panthera_tigris_altaica
ENSLBEG00000013654pabpc410082.143ENSPTRG00000000573PABPC410082.582Pan_troglodytes
ENSLBEG00000013654pabpc410082.143ENSPANG00000009484PABPC410082.582Papio_anubis
ENSLBEG00000013654pabpc49989.828ENSPKIG00000025356pabpc410089.828Paramormyrops_kingsleyae
ENSLBEG00000013654pabpc49986.342ENSPSIG00000016892PABPC410085.714Pelodiscus_sinensis
ENSLBEG00000013654pabpc49991.493ENSPMGG00000009073pabpc49990.851Periophthalmus_magnuspinnatus
ENSLBEG00000013654pabpc49981.917ENSPEMG00000023569-9983.203Peromyscus_maniculatus_bairdii
ENSLBEG00000013654pabpc49979.380ENSPEMG00000024193-9979.563Peromyscus_maniculatus_bairdii
ENSLBEG00000013654pabpc48774.561ENSPMAG00000002836pabpc49975.263Petromyzon_marinus
ENSLBEG00000013654pabpc49573.739ENSPMAG00000007885pabpc49972.746Petromyzon_marinus
ENSLBEG00000013654pabpc49692.874ENSPCIG00000020674PABPC410093.447Phascolarctos_cinereus
ENSLBEG00000013654pabpc410094.286ENSPFOG00000002682pabpc410094.286Poecilia_formosa
ENSLBEG00000013654pabpc410094.444ENSPLAG00000010112pabpc410094.444Poecilia_latipinna
ENSLBEG00000013654pabpc49894.822ENSPMEG00000019739pabpc410094.127Poecilia_mexicana
ENSLBEG00000013654pabpc410094.762ENSPREG00000001589pabpc410094.762Poecilia_reticulata
ENSLBEG00000013654pabpc410079.583ENSPPYG00000001506PABPC410078.869Pongo_abelii
ENSLBEG00000013654pabpc410074.665ENSPCAG00000003341PABPC410074.405Procavia_capensis
ENSLBEG00000013654pabpc410082.016ENSPCOG00000023725-10082.582Propithecus_coquereli
ENSLBEG00000013654pabpc49969.213ENSPCOG00000025882-9581.132Propithecus_coquereli
ENSLBEG00000013654pabpc49878.218ENSPVAG00000002187PABPC410077.393Pteropus_vampyrus
ENSLBEG00000013654pabpc410095.556ENSPNYG00000006134pabpc410095.556Pundamilia_nyererei
ENSLBEG00000013654pabpc410091.969ENSPNAG00000024355pabpc410091.969Pygocentrus_nattereri
ENSLBEG00000013654pabpc410080.822ENSRNOG00000015642Pabpc410080.488Rattus_norvegicus
ENSLBEG00000013654pabpc410078.691ENSRNOG00000028592AABR07035074.110078.354Rattus_norvegicus
ENSLBEG00000013654pabpc410082.143ENSRBIG00000039761PABPC410082.582Rhinopithecus_bieti
ENSLBEG00000013654pabpc410082.143ENSRROG00000033355PABPC410082.582Rhinopithecus_roxellana
ENSLBEG00000013654pabpc410082.143ENSSBOG00000026193PABPC410082.582Saimiri_boliviensis_boliviensis
ENSLBEG00000013654pabpc49786.400ENSSHAG00000018139PABPC410085.086Sarcophilus_harrisii
ENSLBEG00000013654pabpc49989.233ENSSFOG00015023514pabpc410089.233Scleropages_formosus
ENSLBEG00000013654pabpc49995.707ENSSMAG00000009007pabpc410095.707Scophthalmus_maximus
ENSLBEG00000013654pabpc410096.349ENSSDUG00000012683pabpc410096.349Seriola_dumerili
ENSLBEG00000013654pabpc410096.349ENSSLDG00000013025pabpc410096.349Seriola_lalandi_dorsalis
ENSLBEG00000013654pabpc49972.795ENSSARG00000000310PABPC49972.388Sorex_araneus
ENSLBEG00000013654pabpc49985.895ENSSPUG00000003204PABPC410085.895Sphenodon_punctatus
ENSLBEG00000013654pabpc410096.984ENSSPAG00000009252pabpc410096.984Stegastes_partitus
ENSLBEG00000013654pabpc410082.143ENSSSCG00000003660-10082.426Sus_scrofa
ENSLBEG00000013654pabpc48745.035ENSSSCG00000036170-9545.035Sus_scrofa
ENSLBEG00000013654pabpc49981.381ENSTGUG00000001266PABPC410080.960Taeniopygia_guttata
ENSLBEG00000013654pabpc410093.968ENSTRUG00000005907pabpc49993.968Takifugu_rubripes
ENSLBEG00000013654pabpc410087.778ENSTNIG00000016902pabpc49987.460Tetraodon_nigroviridis
ENSLBEG00000013654pabpc49968.595ENSTBEG00000009035PABPC410068.152Tupaia_belangeri
ENSLBEG00000013654pabpc49961.654ENSTTRG00000014340PABPC410066.997Tursiops_truncatus
ENSLBEG00000013654pabpc410082.143ENSUAMG00000000303PABPC410082.426Ursus_americanus
ENSLBEG00000013654pabpc410089.140ENSUMAG00000019585PABPC49991.346Ursus_maritimus
ENSLBEG00000013654pabpc47070.370ENSVPAG00000010041PABPC47370.000Vicugna_pacos
ENSLBEG00000013654pabpc410082.143ENSVVUG00000005215PABPC410082.426Vulpes_vulpes
ENSLBEG00000013654pabpc49980.564ENSXETG00000010946pabpc410081.132Xenopus_tropicalis
ENSLBEG00000013654pabpc46596.450ENSXETG00000027221-10096.450Xenopus_tropicalis
ENSLBEG00000013654pabpc49991.844ENSXCOG00000013190pabpc49692.925Xiphophorus_couchianus
ENSLBEG00000013654pabpc410094.603ENSXMAG00000019007pabpc410094.603Xiphophorus_maculatus

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