EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000013756 (Gene tree)
Gene ID: 109981039
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 9585 bases
Position: chrFKLU01000002.1:703788-713372
Accession: 109981039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000017851	MMR_HSR1	PF01926.23	5.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000018850	-	3950	XM_020629664	ENSLBEP00000017851	242 (aa)	XP_020485320	UPI0009B3AA8E

Gene Model

Click here to download ENSLBEG00000013756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013756's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000013756	rab12	84	38.028	ENSLBEG00000026857	rab11a	95	38.028
ENSLBEG00000013756	rab12	70	38.286	ENSLBEG00000025798	zgc:101559	74	38.728
ENSLBEG00000013756	rab12	74	40.860	ENSLBEG00000026777	rab33ba	83	39.896
ENSLBEG00000013756	rab12	71	50.581	ENSLBEG00000026779	rab13	86	50.581
ENSLBEG00000013756	rab12	68	35.714	ENSLBEG00000020582	rab9a	83	35.714
ENSLBEG00000013756	rab12	65	34.177	ENSLBEG00000027819	rab34b	64	37.500
ENSLBEG00000013756	rab12	69	36.310	ENSLBEG00000004128	rab5c	76	36.310
ENSLBEG00000013756	rab12	70	39.645	ENSLBEG00000003101	rab4a	79	39.645
ENSLBEG00000013756	rab12	69	42.262	ENSLBEG00000022630	-	78	42.262
ENSLBEG00000013756	rab12	61	36.184	ENSLBEG00000018063	-	63	36.184
ENSLBEG00000013756	rab12	71	44.444	ENSLBEG00000013463	rab15	80	44.444
ENSLBEG00000013756	rab12	70	41.279	ENSLBEG00000001193	rab42a	79	41.279
ENSLBEG00000013756	rab12	83	36.318	ENSLBEG00000003748	rab6a	76	40.252
ENSLBEG00000013756	rab12	66	34.591	ENSLBEG00000003235	rab22a	81	34.591
ENSLBEG00000013756	rab12	79	40.104	ENSLBEG00000020796	rab2a	81	45.161
ENSLBEG00000013756	rab12	63	45.098	ENSLBEG00000027539	-	70	45.098
ENSLBEG00000013756	rab12	79	37.173	ENSLBEG00000019372	rab6bb	84	37.714
ENSLBEG00000013756	rab12	65	39.130	ENSLBEG00000018180	si:dkey-13a21.4	78	39.130
ENSLBEG00000013756	rab12	71	45.349	ENSLBEG00000005791	-	80	45.349
ENSLBEG00000013756	rab12	69	31.737	ENSLBEG00000019137	rhebl1	84	31.737
ENSLBEG00000013756	rab12	70	48.521	ENSLBEG00000021040	rab1ba	84	48.521
ENSLBEG00000013756	rab12	67	30.508	ENSLBEG00000016218	rasl11a	66	30.508
ENSLBEG00000013756	rab12	72	37.143	ENSLBEG00000026930	rab6ba	84	37.143
ENSLBEG00000013756	rab12	69	31.138	ENSLBEG00000014885	rheb	89	31.138
ENSLBEG00000013756	rab12	71	46.512	ENSLBEG00000001146	rab30	84	46.512
ENSLBEG00000013756	rab12	74	37.989	ENSLBEG00000002367	rab25a	82	37.989
ENSLBEG00000013756	rab12	84	37.963	ENSLBEG00000015248	rab11bb	80	41.341
ENSLBEG00000013756	rab12	65	39.752	ENSLBEG00000002926	si:dkey-34d22.5	72	39.752
ENSLBEG00000013756	rab12	66	32.927	ENSLBEG00000026006	rab34a	61	32.927
ENSLBEG00000013756	rab12	67	47.561	ENSLBEG00000005861	rab18a	76	47.561
ENSLBEG00000013756	rab12	68	41.916	ENSLBEG00000001313	RAB39B	78	41.916
ENSLBEG00000013756	rab12	83	32.683	ENSLBEG00000005018	rab32b	88	32.979
ENSLBEG00000013756	rab12	86	43.062	ENSLBEG00000027781	rab1ab	86	46.196
ENSLBEG00000013756	rab12	80	36.364	ENSLBEG00000014427	rab33a	72	40.491
ENSLBEG00000013756	rab12	77	37.895	ENSLBEG00000017798	-	81	37.278
ENSLBEG00000013756	rab12	76	38.587	ENSLBEG00000016446	rab25b	95	35.961
ENSLBEG00000013756	rab12	67	48.171	ENSLBEG00000019428	rab18b	79	48.171
ENSLBEG00000013756	rab12	74	31.522	ENSLBEG00000027691	RAB17	79	31.522
ENSLBEG00000013756	rab12	67	44.444	ENSLBEG00000001618	rab35b	94	40.838
ENSLBEG00000013756	rab12	84	37.915	ENSLBEG00000004172	-	81	40.556
ENSLBEG00000013756	rab12	78	45.503	ENSLBEG00000028426	RAB1A	83	49.112
ENSLBEG00000013756	rab12	77	37.895	ENSLBEG00000001796	RAB7A	81	37.278
ENSLBEG00000013756	rab12	71	40.698	ENSLBEG00000007681	si:dkey-16l2.16	81	40.698
ENSLBEG00000013756	rab12	64	31.210	ENSLBEG00000025705	si:ch73-116o1.2	80	31.548
ENSLBEG00000013756	rab12	84	35.922	ENSLBEG00000016417	rab11al	81	39.665
ENSLBEG00000013756	rab12	83	35.071	ENSLBEG00000006152	-	82	38.462
ENSLBEG00000013756	rab12	62	31.126	ENSLBEG00000028450	kras	85	31.481
ENSLBEG00000013756	rab12	68	35.119	ENSLBEG00000011478	rab9b	77	35.119
ENSLBEG00000013756	rab12	61	33.784	ENSLBEG00000003132	rras	79	33.540
ENSLBEG00000013756	rab12	74	40.000	ENSLBEG00000006087	rab11ba	81	40.000
ENSLBEG00000013756	rab12	93	32.314	ENSLBEG00000002516	rab5aa	82	34.946
ENSLBEG00000013756	rab12	81	36.224	ENSLBEG00000026790	-	87	32.804
ENSLBEG00000013756	rab12	83	35.071	ENSLBEG00000018812	RAB29	85	37.805
ENSLBEG00000013756	rab12	86	35.377	ENSLBEG00000019435	rab14	80	39.306
ENSLBEG00000013756	rab12	82	37.374	ENSLBEG00000010408	-	74	37.500
ENSLBEG00000013756	rab12	77	32.990	ENSLBEG00000013176	rab23	78	34.568
ENSLBEG00000013756	rab12	68	31.098	ENSLBEG00000003644	rabl2	71	31.098
ENSLBEG00000013756	rab12	74	42.458	ENSLBEG00000026989	RAB15	84	42.458
ENSLBEG00000013756	rab12	84	36.019	ENSLBEG00000005981	-	79	38.333
ENSLBEG00000013756	rab12	78	36.649	ENSLBEG00000008746	RAB41	75	38.750
ENSLBEG00000013756	rab12	72	44.828	ENSLBEG00000027226	-	73	46.552
ENSLBEG00000013756	rab12	68	36.310	ENSLBEG00000005128	-	75	36.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000013756	rab12	93	84.444	ENSG00000206418	RAB12	100	84.016	Homo_sapiens
ENSLBEG00000013756	rab12	90	78.082	ENSAMEG00000007452	RAB12	94	81.735	Ailuropoda_melanoleuca
ENSLBEG00000013756	rab12	100	97.131	ENSACIG00000020616	rab12	100	97.131	Amphilophus_citrinellus
ENSLBEG00000013756	rab12	100	96.708	ENSAOCG00000002130	rab12	100	96.708	Amphiprion_ocellaris
ENSLBEG00000013756	rab12	100	96.708	ENSAPEG00000013255	rab12	100	96.708	Amphiprion_percula
ENSLBEG00000013756	rab12	100	97.934	ENSATEG00000019683	rab12	100	97.934	Anabas_testudineus
ENSLBEG00000013756	rab12	83	89.500	ENSACAG00000003360	RAB12	86	87.892	Anolis_carolinensis
ENSLBEG00000013756	rab12	100	97.531	ENSACLG00000007696	rab12	100	97.531	Astatotilapia_calliptera
ENSLBEG00000013756	rab12	100	87.398	ENSAMXG00000004882	rab12	100	88.211	Astyanax_mexicanus
ENSLBEG00000013756	rab12	93	84.889	ENSBTAG00000010356	RAB12	100	84.426	Bos_taurus
ENSLBEG00000013756	rab12	93	85.398	ENSCJAG00000015468	RAB12	72	84.898	Callithrix_jacchus
ENSLBEG00000013756	rab12	93	84.444	ENSCAFG00020023721	RAB12	84	84.016	Canis_lupus_dingo
ENSLBEG00000013756	rab12	93	84.889	ENSCHIG00000016103	RAB12	100	84.426	Capra_hircus
ENSLBEG00000013756	rab12	86	85.238	ENSCPOG00000022689	RAB12	100	89.524	Cavia_porcellus
ENSLBEG00000013756	rab12	93	85.398	ENSCCAG00000022862	RAB12	100	84.898	Cebus_capucinus
ENSLBEG00000013756	rab12	91	84.375	ENSCATG00000037784	RAB12	93	87.892	Cercocebus_atys
ENSLBEG00000013756	rab12	84	88.780	ENSCSAG00000017569	RAB12	72	83.468	Chlorocebus_sabaeus
ENSLBEG00000013756	rab12	93	82.743	ENSCPBG00000028375	RAB12	100	82.449	Chrysemys_picta_bellii
ENSLBEG00000013756	rab12	90	84.475	ENSCANG00000031453	RAB12	99	88.128	Colobus_angolensis_palliatus
ENSLBEG00000013756	rab12	93	85.398	ENSCGRG00001006958	Rab12	83	84.490	Cricetulus_griseus_chok1gshd
ENSLBEG00000013756	rab12	100	97.531	ENSCSEG00000016933	rab12	100	97.531	Cynoglossus_semilaevis
ENSLBEG00000013756	rab12	100	95.122	ENSCVAG00000003539	rab12	100	95.122	Cyprinodon_variegatus
ENSLBEG00000013756	rab12	100	86.364	ENSDARG00000089428	rab12	94	91.818	Danio_rerio
ENSLBEG00000013756	rab12	84	88.293	ENSDNOG00000046064	RAB12	51	87.444	Dasypus_novemcinctus
ENSLBEG00000013756	rab12	93	83.260	ENSDORG00000008920	Rab12	98	87.892	Dipodomys_ordii
ENSLBEG00000013756	rab12	78	64.550	ENSEBUG00000006581	rab12	89	65.934	Eptatretus_burgeri
ENSLBEG00000013756	rab12	93	84.513	ENSEASG00005002926	RAB12	83	84.082	Equus_asinus_asinus
ENSLBEG00000013756	rab12	93	84.513	ENSECAG00000007384	RAB12	71	84.082	Equus_caballus
ENSLBEG00000013756	rab12	100	91.322	ENSELUG00000007123	rab12	100	89.669	Esox_lucius
ENSLBEG00000013756	rab12	93	84.444	ENSFCAG00000027710	RAB12	72	84.016	Felis_catus
ENSLBEG00000013756	rab12	100	92.653	ENSFHEG00000004319	rab12	100	94.286	Fundulus_heteroclitus
ENSLBEG00000013756	rab12	86	92.308	ENSGMOG00000012335	rab12	87	90.385	Gadus_morhua
ENSLBEG00000013756	rab12	93	83.772	ENSGALG00000033608	RAB12	89	87.892	Gallus_gallus
ENSLBEG00000013756	rab12	97	86.383	ENSGACG00000016639	rab12	100	93.088	Gasterosteus_aculeatus
ENSLBEG00000013756	rab12	93	82.301	ENSGAGG00000007278	RAB12	100	82.041	Gopherus_agassizii
ENSLBEG00000013756	rab12	100	97.531	ENSHBUG00000008497	rab12	100	97.531	Haplochromis_burtoni
ENSLBEG00000013756	rab12	95	81.034	ENSHGLG00000006189	RAB12	86	88.235	Heterocephalus_glaber_female
ENSLBEG00000013756	rab12	100	91.358	ENSHCOG00000012376	rab12	100	90.535	Hippocampus_comes
ENSLBEG00000013756	rab12	91	91.403	ENSIPUG00000017401	rab12	90	91.364	Ictalurus_punctatus
ENSLBEG00000013756	rab12	93	81.858	ENSSTOG00000025122	RAB12	96	87.671	Ictidomys_tridecemlineatus
ENSLBEG00000013756	rab12	91	84.375	ENSJJAG00000019064	Rab12	98	87.892	Jaculus_jaculus
ENSLBEG00000013756	rab12	100	91.736	ENSKMAG00000020056	rab12	100	90.496	Kryptolebias_marmoratus
ENSLBEG00000013756	rab12	91	86.547	ENSLACG00000010461	RAB12	90	86.547	Latimeria_chalumnae
ENSLBEG00000013756	rab12	100	83.065	ENSLOCG00000002680	rab12	100	85.887	Lepisosteus_oculatus
ENSLBEG00000013756	rab12	93	84.581	ENSMFAG00000043551	RAB12	100	84.146	Macaca_fascicularis
ENSLBEG00000013756	rab12	84	88.780	ENSMNEG00000040853	RAB12	88	87.892	Macaca_nemestrina
ENSLBEG00000013756	rab12	100	97.934	ENSMAMG00000006862	rab12	100	97.934	Mastacembelus_armatus
ENSLBEG00000013756	rab12	100	97.531	ENSMZEG00005024316	rab12	100	97.531	Maylandia_zebra
ENSLBEG00000013756	rab12	83	84.804	ENSMGAG00000009197	RAB12	100	88.725	Meleagris_gallopavo
ENSLBEG00000013756	rab12	93	85.398	ENSMAUG00000008371	Rab12	83	84.490	Mesocricetus_auratus
ENSLBEG00000013756	rab12	91	83.929	ENSMICG00000030661	RAB12	93	87.444	Microcebus_murinus
ENSLBEG00000013756	rab12	90	84.932	ENSMOCG00000000452	Rab12	100	88.584	Microtus_ochrogaster
ENSLBEG00000013756	rab12	86	88.517	ENSMODG00000021452	RAB12	66	88.341	Monodelphis_domestica
ENSLBEG00000013756	rab12	100	95.041	ENSMALG00000015762	rab12	100	95.041	Monopterus_albus
ENSLBEG00000013756	rab12	93	85.398	MGP_CAROLIEiJ_G0021839	Rab12	84	84.490	Mus_caroli
ENSLBEG00000013756	rab12	93	85.398	ENSMUSG00000023460	Rab12	100	84.490	Mus_musculus
ENSLBEG00000013756	rab12	93	85.398	MGP_PahariEiJ_G0020826	Rab12	100	84.490	Mus_pahari
ENSLBEG00000013756	rab12	93	85.398	MGP_SPRETEiJ_G0022750	Rab12	83	84.490	Mus_spretus
ENSLBEG00000013756	rab12	100	80.816	ENSMLUG00000002883	RAB12	100	84.082	Myotis_lucifugus
ENSLBEG00000013756	rab12	91	76.786	ENSNGAG00000019722	-	91	76.682	Nannospalax_galili
ENSLBEG00000013756	rab12	95	81.545	ENSNGAG00000024103	-	95	87.444	Nannospalax_galili
ENSLBEG00000013756	rab12	100	97.531	ENSNBRG00000014428	rab12	100	97.531	Neolamprologus_brichardi
ENSLBEG00000013756	rab12	93	84.000	ENSNLEG00000006939	RAB12	100	83.607	Nomascus_leucogenys
ENSLBEG00000013756	rab12	100	80.894	ENSMEUG00000000493	RAB12	91	88.341	Notamacropus_eugenii
ENSLBEG00000013756	rab12	90	85.388	ENSODEG00000006414	RAB12	100	89.041	Octodon_degus
ENSLBEG00000013756	rab12	100	97.531	ENSONIG00000018469	rab12	100	97.531	Oreochromis_niloticus
ENSLBEG00000013756	rab12	100	96.281	ENSORLG00000003902	rab12	100	96.281	Oryzias_latipes
ENSLBEG00000013756	rab12	100	96.694	ENSORLG00020005131	rab12	100	96.694	Oryzias_latipes_hni
ENSLBEG00000013756	rab12	100	95.868	ENSORLG00015007869	rab12	100	95.868	Oryzias_latipes_hsok
ENSLBEG00000013756	rab12	100	97.107	ENSOMEG00000008191	rab12	100	97.107	Oryzias_melastigma
ENSLBEG00000013756	rab12	86	84.762	ENSOGAG00000028002	RAB12	99	88.571	Otolemur_garnettii
ENSLBEG00000013756	rab12	79	89.529	ENSOARG00000000728	RAB12	88	87.442	Ovis_aries
ENSLBEG00000013756	rab12	85	84.541	ENSPPAG00000009152	RAB12	97	88.835	Pan_paniscus
ENSLBEG00000013756	rab12	93	84.444	ENSPPRG00000024521	RAB12	100	84.016	Panthera_pardus
ENSLBEG00000013756	rab12	93	84.444	ENSPTRG00000009853	RAB12	100	84.016	Pan_troglodytes
ENSLBEG00000013756	rab12	93	84.649	ENSPANG00000009320	RAB12	90	88.341	Papio_anubis
ENSLBEG00000013756	rab12	100	88.889	ENSPKIG00000008579	rab12	100	88.477	Paramormyrops_kingsleyae
ENSLBEG00000013756	rab12	100	92.562	ENSPMGG00000001890	rab12	100	92.562	Periophthalmus_magnuspinnatus
ENSLBEG00000013756	rab12	93	84.956	ENSPEMG00000021032	Rab12	84	84.082	Peromyscus_maniculatus_bairdii
ENSLBEG00000013756	rab12	93	84.581	ENSPCIG00000010453	RAB12	56	88.341	Phascolarctos_cinereus
ENSLBEG00000013756	rab12	100	95.082	ENSPFOG00000001579	rab12	100	95.082	Poecilia_formosa
ENSLBEG00000013756	rab12	100	95.082	ENSPLAG00000013594	rab12	100	95.082	Poecilia_latipinna
ENSLBEG00000013756	rab12	100	95.082	ENSPMEG00000010417	rab12	100	95.082	Poecilia_mexicana
ENSLBEG00000013756	rab12	100	95.902	ENSPREG00000017487	rab12	100	95.902	Poecilia_reticulata
ENSLBEG00000013756	rab12	93	84.444	ENSPPYG00000009015	-	72	84.016	Pongo_abelii
ENSLBEG00000013756	rab12	93	84.000	ENSPCAG00000015007	RAB12	100	83.607	Procavia_capensis
ENSLBEG00000013756	rab12	93	84.444	ENSPCOG00000019816	RAB12	100	84.016	Propithecus_coquereli
ENSLBEG00000013756	rab12	93	84.889	ENSPVAG00000002757	RAB12	100	84.426	Pteropus_vampyrus
ENSLBEG00000013756	rab12	100	97.531	ENSPNYG00000023905	rab12	100	97.531	Pundamilia_nyererei
ENSLBEG00000013756	rab12	100	97.531	ENSPNYG00000005654	rab12	100	97.531	Pundamilia_nyererei
ENSLBEG00000013756	rab12	100	87.398	ENSPNAG00000015031	rab12	100	88.211	Pygocentrus_nattereri
ENSLBEG00000013756	rab12	93	83.260	ENSRNOG00000019295	Rab12	91	82.819	Rattus_norvegicus
ENSLBEG00000013756	rab12	91	84.375	ENSRBIG00000028760	RAB12	96	87.892	Rhinopithecus_bieti
ENSLBEG00000013756	rab12	91	84.375	ENSRROG00000019249	RAB12	93	87.892	Rhinopithecus_roxellana
ENSLBEG00000013756	rab12	95	79.654	ENSSBOG00000021125	RAB12	80	88.517	Saimiri_boliviensis_boliviensis
ENSLBEG00000013756	rab12	93	84.071	ENSSHAG00000001489	RAB12	90	88.670	Sarcophilus_harrisii
ENSLBEG00000013756	rab12	100	96.694	ENSSMAG00000012678	rab12	100	96.694	Scophthalmus_maximus
ENSLBEG00000013756	rab12	100	98.760	ENSSDUG00000008505	rab12	100	98.760	Seriola_dumerili
ENSLBEG00000013756	rab12	100	98.760	ENSSLDG00000022239	rab12	100	98.760	Seriola_lalandi_dorsalis
ENSLBEG00000013756	rab12	84	89.706	ENSSPUG00000003222	RAB12	91	88.789	Sphenodon_punctatus
ENSLBEG00000013756	rab12	100	97.119	ENSSPAG00000010822	rab12	100	97.119	Stegastes_partitus
ENSLBEG00000013756	rab12	93	84.444	ENSSSCG00000038026	RAB12	100	84.426	Sus_scrofa
ENSLBEG00000013756	rab12	86	88.517	ENSTGUG00000009889	RAB12	89	88.341	Taeniopygia_guttata
ENSLBEG00000013756	rab12	100	92.975	ENSTRUG00000024455	rab12	100	92.975	Takifugu_rubripes
ENSLBEG00000013756	rab12	100	93.802	ENSTNIG00000014859	rab12	100	93.802	Tetraodon_nigroviridis
ENSLBEG00000013756	rab12	90	84.475	ENSTTRG00000008711	RAB12	99	88.128	Tursiops_truncatus
ENSLBEG00000013756	rab12	93	84.444	ENSUAMG00000018092	RAB12	100	84.016	Ursus_americanus
ENSLBEG00000013756	rab12	90	83.710	ENSVVUG00000011748	RAB12	99	87.330	Vulpes_vulpes
ENSLBEG00000013756	rab12	89	88.532	ENSXETG00000004289	rab12	72	88.393	Xenopus_tropicalis
ENSLBEG00000013756	rab12	100	93.852	ENSXCOG00000019310	rab12	100	94.262	Xiphophorus_couchianus
ENSLBEG00000013756	rab12	100	94.262	ENSXMAG00000023617	rab12	100	94.672	Xiphophorus_maculatus