EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000013811 (Gene tree)
Gene ID: -
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 4635 bases
Position: chrFKLU01000163.1:827036-831670
Accession: 109989551
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000017977	MMR_HSR1	PF01926.23	5.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000018988	SRL (1 of many)-202	549	-	ENSLBEP00000017988	182 (aa)	-	-
ENSLBET00000018977	SRL (1 of many)-201	1392	XM_020641341	ENSLBEP00000017977	463 (aa)	XP_020496997	-

Gene Model

Click here to download ENSLBEG00000013811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013811's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000013811	SRL	99	74.728	ENSLBEG00000026643	srl	97	74.510
ENSLBEG00000013811	SRL	64	33.557	ENSLBEG00000004961	-	55	33.557
ENSLBEG00000013811	SRL	80	32.708	ENSLBEG00000009464	ehd3	69	32.718
ENSLBEG00000013811	SRL	77	33.690	ENSLBEG00000018343	ehd2b	65	33.690
ENSLBEG00000013811	SRL	85	31.298	ENSLBEG00000004390	ehd1a	71	31.298
ENSLBEG00000013811	SRL	90	30.310	ENSLBEG00000020127	ehd4	69	30.534

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000013811	SRL	98	74.123	ENSG00000185739	SRL	99	75.638	Homo_sapiens
ENSLBEG00000013811	SRL	97	87.946	ENSAPOG00000012432	SRL	99	87.723	Acanthochromis_polyacanthus
ENSLBEG00000013811	SRL	99	74.510	ENSAPOG00000018093	srl	99	75.792	Acanthochromis_polyacanthus
ENSLBEG00000013811	SRL	99	73.856	ENSAMEG00000010862	SRL	52	74.074	Ailuropoda_melanoleuca
ENSLBEG00000013811	SRL	95	76.471	ENSACIG00000015799	srl	98	76.244	Amphilophus_citrinellus
ENSLBEG00000013811	SRL	97	85.778	ENSACIG00000015419	SRL	100	85.778	Amphilophus_citrinellus
ENSLBEG00000013811	SRL	94	76.037	ENSAOCG00000007574	srl	99	75.806	Amphiprion_ocellaris
ENSLBEG00000013811	SRL	99	89.760	ENSAOCG00000017049	SRL	99	89.760	Amphiprion_ocellaris
ENSLBEG00000013811	SRL	99	84.532	ENSAPEG00000006533	SRL	99	87.146	Amphiprion_percula
ENSLBEG00000013811	SRL	99	74.292	ENSAPEG00000006911	srl	97	74.074	Amphiprion_percula
ENSLBEG00000013811	SRL	99	74.292	ENSATEG00000024315	srl	97	74.074	Anabas_testudineus
ENSLBEG00000013811	SRL	97	87.013	ENSATEG00000009643	SRL	53	87.229	Anabas_testudineus
ENSLBEG00000013811	SRL	95	73.568	ENSACAG00000016380	SRL	86	72.187	Anolis_carolinensis
ENSLBEG00000013811	SRL	99	74.510	ENSACLG00000027685	srl	97	76.018	Astatotilapia_calliptera
ENSLBEG00000013811	SRL	98	84.402	ENSACLG00000024674	SRL	58	84.829	Astatotilapia_calliptera
ENSLBEG00000013811	SRL	95	78.005	ENSAMXG00000018789	srl	86	77.778	Astyanax_mexicanus
ENSLBEG00000013811	SRL	89	80.630	ENSAMXG00000038693	SRL	99	76.327	Astyanax_mexicanus
ENSLBEG00000013811	SRL	95	75.057	ENSBTAG00000001078	SRL	56	75.283	Bos_taurus
ENSLBEG00000013811	SRL	95	75.792	ENSCJAG00000019750	SRL	96	74.561	Callithrix_jacchus
ENSLBEG00000013811	SRL	99	73.856	ENSCAFG00000019233	SRL	84	74.066	Canis_familiaris
ENSLBEG00000013811	SRL	95	75.566	ENSCAFG00020025024	SRL	54	75.792	Canis_lupus_dingo
ENSLBEG00000013811	SRL	99	73.261	ENSCHIG00000017927	SRL	55	75.283	Capra_hircus
ENSLBEG00000013811	SRL	98	74.561	ENSTSYG00000007919	SRL	99	76.334	Carlito_syrichta
ENSLBEG00000013811	SRL	98	74.123	ENSCPOG00000012643	SRL	96	74.342	Cavia_porcellus
ENSLBEG00000013811	SRL	95	71.946	ENSCCAG00000032646	SRL	100	77.895	Cebus_capucinus
ENSLBEG00000013811	SRL	98	74.123	ENSCATG00000032227	-	96	74.342	Cercocebus_atys
ENSLBEG00000013811	SRL	98	74.342	ENSCLAG00000016242	SRL	96	74.561	Chinchilla_lanigera
ENSLBEG00000013811	SRL	83	78.497	ENSCHOG00000001618	SRL	52	78.756	Choloepus_hoffmanni
ENSLBEG00000013811	SRL	95	78.149	ENSCPBG00000026371	SRL	97	72.340	Chrysemys_picta_bellii
ENSLBEG00000013811	SRL	90	56.490	ENSCING00000005231	-	92	56.490	Ciona_intestinalis
ENSLBEG00000013811	SRL	98	73.904	ENSCANG00000035872	SRL	99	75.638	Colobus_angolensis_palliatus
ENSLBEG00000013811	SRL	99	73.581	ENSCGRG00001016630	Srl	96	74.123	Cricetulus_griseus_chok1gshd
ENSLBEG00000013811	SRL	99	73.581	ENSCGRG00000005458	Srl	96	74.123	Cricetulus_griseus_crigri
ENSLBEG00000013811	SRL	99	73.638	ENSCSEG00000016151	srl	97	73.420	Cynoglossus_semilaevis
ENSLBEG00000013811	SRL	99	84.532	ENSCSEG00000011866	SRL	92	84.532	Cynoglossus_semilaevis
ENSLBEG00000013811	SRL	97	85.000	ENSCVAG00000022465	SRL	61	84.348	Cyprinodon_variegatus
ENSLBEG00000013811	SRL	95	76.471	ENSCVAG00000003513	srl	95	76.244	Cyprinodon_variegatus
ENSLBEG00000013811	SRL	95	78.054	ENSDARG00000104587	srl	94	77.828	Danio_rerio
ENSLBEG00000013811	SRL	82	82.031	ENSDARG00000112959	CABZ01072309.1	100	82.031	Danio_rerio
ENSLBEG00000013811	SRL	95	75.339	ENSDNOG00000011643	SRL	53	75.566	Dasypus_novemcinctus
ENSLBEG00000013811	SRL	98	74.123	ENSDORG00000014807	Srl	96	74.123	Dipodomys_ordii
ENSLBEG00000013811	SRL	81	61.333	ENSEBUG00000015937	srl	95	61.333	Eptatretus_burgeri
ENSLBEG00000013811	SRL	95	75.510	ENSEASG00005000942	SRL	53	75.737	Equus_asinus_asinus
ENSLBEG00000013811	SRL	98	73.846	ENSECAG00000024219	SRL	96	74.066	Equus_caballus
ENSLBEG00000013811	SRL	99	72.516	ENSELUG00000015616	srl	97	72.516	Esox_lucius
ENSLBEG00000013811	SRL	95	75.566	ENSFCAG00000022075	SRL	96	74.123	Felis_catus
ENSLBEG00000013811	SRL	97	74.720	ENSFALG00000004328	SRL	63	74.720	Ficedula_albicollis
ENSLBEG00000013811	SRL	99	74.179	ENSFDAG00000006199	SRL	97	74.292	Fukomys_damarensis
ENSLBEG00000013811	SRL	97	84.667	ENSFHEG00000011854	SRL	100	85.556	Fundulus_heteroclitus
ENSLBEG00000013811	SRL	95	76.244	ENSFHEG00000011239	srl	95	76.018	Fundulus_heteroclitus
ENSLBEG00000013811	SRL	95	74.393	ENSGMOG00000014954	srl	99	74.172	Gadus_morhua
ENSLBEG00000013811	SRL	99	73.799	ENSGALG00000038884	SRL	97	73.799	Gallus_gallus
ENSLBEG00000013811	SRL	95	76.923	ENSGAFG00000000010	srl	96	76.697	Gambusia_affinis
ENSLBEG00000013811	SRL	98	86.207	ENSGAFG00000016984	SRL	99	86.192	Gambusia_affinis
ENSLBEG00000013811	SRL	95	74.172	ENSGACG00000011332	srl	99	73.951	Gasterosteus_aculeatus
ENSLBEG00000013811	SRL	98	74.123	ENSGGOG00000011312	-	96	74.342	Gorilla_gorilla
ENSLBEG00000013811	SRL	98	84.829	ENSHBUG00000015710	SRL	58	85.256	Haplochromis_burtoni
ENSLBEG00000013811	SRL	99	74.510	ENSHBUG00000007581	srl	97	76.018	Haplochromis_burtoni
ENSLBEG00000013811	SRL	98	74.342	ENSHGLG00000015271	SRL	96	74.561	Heterocephalus_glaber_female
ENSLBEG00000013811	SRL	98	74.342	ENSHGLG00100019378	SRL	96	74.561	Heterocephalus_glaber_male
ENSLBEG00000013811	SRL	99	73.856	ENSHCOG00000008687	srl	98	75.339	Hippocampus_comes
ENSLBEG00000013811	SRL	98	83.550	ENSHCOG00000001012	SRL	50	84.735	Hippocampus_comes
ENSLBEG00000013811	SRL	95	70.022	ENSIPUG00000011609	SRL	99	69.803	Ictalurus_punctatus
ENSLBEG00000013811	SRL	99	74.728	ENSIPUG00000012513	srl	94	76.697	Ictalurus_punctatus
ENSLBEG00000013811	SRL	98	74.561	ENSSTOG00000021151	-	96	74.781	Ictidomys_tridecemlineatus
ENSLBEG00000013811	SRL	98	74.123	ENSJJAG00000016400	Srl	96	74.123	Jaculus_jaculus
ENSLBEG00000013811	SRL	96	75.225	ENSKMAG00000014115	srl	98	75.000	Kryptolebias_marmoratus
ENSLBEG00000013811	SRL	95	87.445	ENSKMAG00000019537	SRL	100	87.330	Kryptolebias_marmoratus
ENSLBEG00000013811	SRL	96	73.708	ENSLACG00000002825	SRL	98	73.708	Latimeria_chalumnae
ENSLBEG00000013811	SRL	99	76.471	ENSLOCG00000002644	srl	97	76.471	Lepisosteus_oculatus
ENSLBEG00000013811	SRL	99	73.261	ENSLAFG00000006329	SRL	52	73.478	Loxodonta_africana
ENSLBEG00000013811	SRL	93	75.406	ENSMFAG00000037383	SRL	99	75.638	Macaca_fascicularis
ENSLBEG00000013811	SRL	99	74.074	ENSMNEG00000019236	-	97	74.292	Macaca_nemestrina
ENSLBEG00000013811	SRL	98	68.640	ENSMLEG00000032156	SRL	96	68.860	Mandrillus_leucophaeus
ENSLBEG00000013811	SRL	95	76.018	ENSMAMG00000023322	srl	94	75.792	Mastacembelus_armatus
ENSLBEG00000013811	SRL	98	84.946	ENSMAMG00000013756	SRL	54	86.022	Mastacembelus_armatus
ENSLBEG00000013811	SRL	99	74.510	ENSMZEG00005004548	srl	97	76.018	Maylandia_zebra
ENSLBEG00000013811	SRL	98	84.615	ENSMZEG00005004010	SRL	59	85.043	Maylandia_zebra
ENSLBEG00000013811	SRL	98	74.670	ENSMGAG00000009342	SRL	94	79.784	Meleagris_gallopavo
ENSLBEG00000013811	SRL	98	74.561	ENSMICG00000032307	SRL	96	74.781	Microcebus_murinus
ENSLBEG00000013811	SRL	98	73.684	ENSMOCG00000008208	Srl	96	73.684	Microtus_ochrogaster
ENSLBEG00000013811	SRL	96	86.492	ENSMMOG00000021572	SRL	100	86.275	Mola_mola
ENSLBEG00000013811	SRL	95	76.244	ENSMMOG00000013970	srl	98	76.018	Mola_mola
ENSLBEG00000013811	SRL	96	75.561	ENSMALG00000005039	srl	98	75.336	Monopterus_albus
ENSLBEG00000013811	SRL	91	85.000	ENSMALG00000000670	SRL	98	85.000	Monopterus_albus
ENSLBEG00000013811	SRL	99	73.856	MGP_CAROLIEiJ_G0020400	Srl	96	74.123	Mus_caroli
ENSLBEG00000013811	SRL	99	73.856	ENSMUSG00000022519	Srl	96	74.123	Mus_musculus
ENSLBEG00000013811	SRL	95	75.566	MGP_PahariEiJ_G0016108	Srl	50	73.638	Mus_pahari
ENSLBEG00000013811	SRL	99	73.856	MGP_SPRETEiJ_G0021294	Srl	96	74.123	Mus_spretus
ENSLBEG00000013811	SRL	98	74.009	ENSMPUG00000015025	SRL	53	75.792	Mustela_putorius_furo
ENSLBEG00000013811	SRL	95	76.018	ENSMLUG00000030733	SRL	55	76.244	Myotis_lucifugus
ENSLBEG00000013811	SRL	95	75.792	ENSNGAG00000019741	Srl	93	75.792	Nannospalax_galili
ENSLBEG00000013811	SRL	98	84.402	ENSNBRG00000002422	SRL	58	84.829	Neolamprologus_brichardi
ENSLBEG00000013811	SRL	99	74.510	ENSNBRG00000023775	srl	97	74.292	Neolamprologus_brichardi
ENSLBEG00000013811	SRL	98	69.737	ENSNLEG00000029051	SRL	96	69.956	Nomascus_leucogenys
ENSLBEG00000013811	SRL	99	68.913	ENSOPRG00000000477	-	54	69.130	Ochotona_princeps
ENSLBEG00000013811	SRL	98	74.342	ENSODEG00000013256	SRL	97	74.565	Octodon_degus
ENSLBEG00000013811	SRL	99	74.074	ENSONIG00000005192	srl	97	73.856	Oreochromis_niloticus
ENSLBEG00000013811	SRL	98	86.093	ENSORLG00000015064	SRL	99	86.093	Oryzias_latipes
ENSLBEG00000013811	SRL	95	76.471	ENSORLG00000008291	srl	91	78.351	Oryzias_latipes
ENSLBEG00000013811	SRL	95	76.471	ENSORLG00020019784	srl	83	74.510	Oryzias_latipes_hni
ENSLBEG00000013811	SRL	98	86.313	ENSORLG00020018173	SRL	99	86.313	Oryzias_latipes_hni
ENSLBEG00000013811	SRL	98	86.534	ENSORLG00015019063	SRL	99	86.534	Oryzias_latipes_hsok
ENSLBEG00000013811	SRL	95	76.244	ENSORLG00015009342	srl	94	74.292	Oryzias_latipes_hsok
ENSLBEG00000013811	SRL	97	85.281	ENSOMEG00000005682	SRL	54	86.147	Oryzias_melastigma
ENSLBEG00000013811	SRL	96	75.955	ENSOMEG00000010006	srl	98	75.730	Oryzias_melastigma
ENSLBEG00000013811	SRL	95	75.792	ENSOGAG00000029266	SRL	54	76.018	Otolemur_garnettii
ENSLBEG00000013811	SRL	99	73.362	ENSOARG00000003074	SRL	57	73.581	Ovis_aries
ENSLBEG00000013811	SRL	99	73.478	ENSPPAG00000024919	-	99	75.638	Pan_paniscus
ENSLBEG00000013811	SRL	95	75.566	ENSPPRG00000010274	SRL	99	75.638	Panthera_pardus
ENSLBEG00000013811	SRL	95	75.566	ENSPTIG00000015162	SRL	99	75.638	Panthera_tigris_altaica
ENSLBEG00000013811	SRL	99	73.478	ENSPTRG00000007712	SRL	99	75.638	Pan_troglodytes
ENSLBEG00000013811	SRL	99	74.074	ENSPANG00000013804	SRL	98	74.292	Papio_anubis
ENSLBEG00000013811	SRL	99	76.356	ENSPKIG00000006405	srl	93	78.281	Paramormyrops_kingsleyae
ENSLBEG00000013811	SRL	99	72.113	ENSPKIG00000024974	SRL	91	72.113	Paramormyrops_kingsleyae
ENSLBEG00000013811	SRL	97	75.664	ENSPMGG00000021081	srl	97	75.442	Periophthalmus_magnuspinnatus
ENSLBEG00000013811	SRL	95	84.163	ENSPMGG00000023505	-	99	84.163	Periophthalmus_magnuspinnatus
ENSLBEG00000013811	SRL	98	74.123	ENSPEMG00000015842	Srl	96	74.123	Peromyscus_maniculatus_bairdii
ENSLBEG00000013811	SRL	90	64.138	ENSPMAG00000004786	srl	99	63.825	Petromyzon_marinus
ENSLBEG00000013811	SRL	98	75.497	ENSPCIG00000012128	SRL	99	75.497	Phascolarctos_cinereus
ENSLBEG00000013811	SRL	99	73.305	ENSPFOG00000011408	srl	96	73.093	Poecilia_formosa
ENSLBEG00000013811	SRL	95	76.923	ENSPLAG00000008017	srl	96	76.697	Poecilia_latipinna
ENSLBEG00000013811	SRL	97	85.268	ENSPLAG00000002932	SRL	99	84.821	Poecilia_latipinna
ENSLBEG00000013811	SRL	98	84.188	ENSPMEG00000005890	SRL	61	84.615	Poecilia_mexicana
ENSLBEG00000013811	SRL	95	76.923	ENSPMEG00000006745	srl	96	76.697	Poecilia_mexicana
ENSLBEG00000013811	SRL	99	84.648	ENSPREG00000000315	SRL	99	85.491	Poecilia_reticulata
ENSLBEG00000013811	SRL	95	76.697	ENSPREG00000007751	srl	98	76.471	Poecilia_reticulata
ENSLBEG00000013811	SRL	91	76.429	ENSPPYG00000007053	SRL	98	76.667	Pongo_abelii
ENSLBEG00000013811	SRL	95	75.510	ENSPCAG00000003378	-	50	75.737	Procavia_capensis
ENSLBEG00000013811	SRL	98	74.342	ENSPCOG00000023135	SRL	99	76.102	Propithecus_coquereli
ENSLBEG00000013811	SRL	95	75.792	ENSPVAG00000006586	SRL	54	76.018	Pteropus_vampyrus
ENSLBEG00000013811	SRL	98	84.615	ENSPNYG00000003423	SRL	58	85.043	Pundamilia_nyererei
ENSLBEG00000013811	SRL	99	74.510	ENSPNYG00000001200	srl	97	76.018	Pundamilia_nyererei
ENSLBEG00000013811	SRL	95	76.697	ENSPNAG00000023106	srl	94	76.471	Pygocentrus_nattereri
ENSLBEG00000013811	SRL	98	78.319	ENSPNAG00000007361	-	93	78.319	Pygocentrus_nattereri
ENSLBEG00000013811	SRL	95	75.792	ENSSBOG00000029273	SRL	96	74.561	Saimiri_boliviensis_boliviensis
ENSLBEG00000013811	SRL	95	77.149	ENSSFOG00015009773	srl	98	75.109	Scleropages_formosus
ENSLBEG00000013811	SRL	95	76.471	ENSSMAG00000016274	srl	96	76.244	Scophthalmus_maximus
ENSLBEG00000013811	SRL	97	87.636	ENSSMAG00000002232	SRL	50	87.852	Scophthalmus_maximus
ENSLBEG00000013811	SRL	97	87.473	ENSSDUG00000009161	SRL	99	87.473	Seriola_dumerili
ENSLBEG00000013811	SRL	95	76.244	ENSSDUG00000010808	srl	97	76.018	Seriola_dumerili
ENSLBEG00000013811	SRL	95	76.244	ENSSLDG00000022024	srl	95	76.018	Seriola_lalandi_dorsalis
ENSLBEG00000013811	SRL	95	89.207	ENSSLDG00000014601	SRL	99	89.648	Seriola_lalandi_dorsalis
ENSLBEG00000013811	SRL	95	75.339	ENSSPUG00000016859	SRL	97	75.339	Sphenodon_punctatus
ENSLBEG00000013811	SRL	99	74.187	ENSSPAG00000019105	srl	97	73.970	Stegastes_partitus
ENSLBEG00000013811	SRL	97	89.509	ENSSPAG00000014254	SRL	99	89.509	Stegastes_partitus
ENSLBEG00000013811	SRL	95	76.190	ENSSSCG00000007949	SRL	98	76.417	Sus_scrofa
ENSLBEG00000013811	SRL	78	79.282	ENSTGUG00000016121	-	98	81.020	Taeniopygia_guttata
ENSLBEG00000013811	SRL	97	74.720	ENSTGUG00000003951	-	98	74.720	Taeniopygia_guttata
ENSLBEG00000013811	SRL	91	86.429	ENSTRUG00000013310	SRL	55	86.429	Takifugu_rubripes
ENSLBEG00000013811	SRL	99	74.292	ENSTRUG00000006005	srl	97	74.074	Takifugu_rubripes
ENSLBEG00000013811	SRL	95	75.792	ENSTNIG00000009739	srl	94	75.566	Tetraodon_nigroviridis
ENSLBEG00000013811	SRL	95	75.566	ENSUAMG00000005701	SRL	55	75.792	Ursus_americanus
ENSLBEG00000013811	SRL	95	75.566	ENSUMAG00000002574	SRL	54	75.792	Ursus_maritimus
ENSLBEG00000013811	SRL	95	76.471	ENSXETG00000017313	srl	98	76.471	Xenopus_tropicalis
ENSLBEG00000013811	SRL	97	85.588	ENSXCOG00000014584	SRL	99	85.398	Xiphophorus_couchianus
ENSLBEG00000013811	SRL	92	76.887	ENSXCOG00000010424	srl	97	76.651	Xiphophorus_couchianus
ENSLBEG00000013811	SRL	98	84.829	ENSXMAG00000027598	SRL	64	85.470	Xiphophorus_maculatus
ENSLBEG00000013811	SRL	95	76.697	ENSXMAG00000004625	srl	89	76.471	Xiphophorus_maculatus