EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000013961 (Gene tree)
Gene ID: 109990155
Gene Symbol: si:ch211-93g23.2
Alias: -
Full Name: putative methyltransferase DDB_G0268948
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5365 bases
Position: chrFKLU01000178.1:42740-48104
Accession: 109990155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000018123	tRNA_U5-meth_tr	PF05958.11	7.7e-06	1	1
ENSLBEP00000018108	tRNA_U5-meth_tr	PF05958.11	1.6e-05	1	1
ENSLBEP00000018123	Methyltransf_31	PF13847.6	3.8e-12	1	1
ENSLBEP00000018108	Methyltransf_31	PF13847.6	5.3e-12	1	1
ENSLBEP00000018123	Methyltransf_8	PF05148.15	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000019117	-	3660	XM_020642164	ENSLBEP00000018108	269 (aa)	XP_020497820	UPI0009B40666
ENSLBET00000019133	-	528	-	ENSLBEP00000018123	175 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000013961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000013961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000013961	si:ch211-93g23.2	100	57.721	ENSLBEG00000026521	zgc:162780	99	57.721
ENSLBEG00000013961	si:ch211-93g23.2	98	48.571	ENSLBEG00000026502	zgc:162396	99	43.015
ENSLBEG00000013961	si:ch211-93g23.2	100	98.885	ENSLBEG00000006987	-	100	98.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000013961	si:ch211-93g23.2	100	57.721	ENSAPOG00000015391	zgc:162780	99	57.721	Acanthochromis_polyacanthus
ENSLBEG00000013961	si:ch211-93g23.2	100	71.481	ENSAPOG00000008054	si:ch211-93g23.2	99	71.481	Acanthochromis_polyacanthus
ENSLBEG00000013961	si:ch211-93g23.2	90	77.215	ENSACIG00000024058	si:ch211-93g23.2	87	76.687	Amphilophus_citrinellus
ENSLBEG00000013961	si:ch211-93g23.2	100	56.250	ENSACIG00000015409	zgc:162780	97	56.250	Amphilophus_citrinellus
ENSLBEG00000013961	si:ch211-93g23.2	100	72.222	ENSAOCG00000000447	-	99	72.222	Amphiprion_ocellaris
ENSLBEG00000013961	si:ch211-93g23.2	100	57.353	ENSAOCG00000004147	zgc:162780	99	57.353	Amphiprion_ocellaris
ENSLBEG00000013961	si:ch211-93g23.2	90	73.248	ENSAPEG00000012843	si:ch211-93g23.2	100	72.840	Amphiprion_percula
ENSLBEG00000013961	si:ch211-93g23.2	100	57.565	ENSAPEG00000008212	zgc:162780	99	57.565	Amphiprion_percula
ENSLBEG00000013961	si:ch211-93g23.2	100	56.618	ENSATEG00000011843	zgc:162780	99	56.618	Anabas_testudineus
ENSLBEG00000013961	si:ch211-93g23.2	100	56.250	ENSACLG00000006922	zgc:162780	99	56.250	Astatotilapia_calliptera
ENSLBEG00000013961	si:ch211-93g23.2	100	75.926	ENSACLG00000009543	si:ch211-93g23.2	100	75.926	Astatotilapia_calliptera
ENSLBEG00000013961	si:ch211-93g23.2	100	55.147	ENSAMXG00000040257	zgc:162780	99	55.147	Astyanax_mexicanus
ENSLBEG00000013961	si:ch211-93g23.2	100	58.088	ENSCVAG00000021445	zgc:162780	99	58.088	Cyprinodon_variegatus
ENSLBEG00000013961	si:ch211-93g23.2	100	69.630	ENSCVAG00000012310	si:ch211-93g23.2	97	73.292	Cyprinodon_variegatus
ENSLBEG00000013961	si:ch211-93g23.2	100	57.934	ENSDARG00000070558	si:ch211-93g23.2	99	57.934	Danio_rerio
ENSLBEG00000013961	si:ch211-93g23.2	100	60.073	ENSDARG00000069548	zgc:162780	99	60.073	Danio_rerio
ENSLBEG00000013961	si:ch211-93g23.2	99	61.255	ENSELUG00000005357	zgc:162780	99	61.255	Esox_lucius
ENSLBEG00000013961	si:ch211-93g23.2	69	63.415	ENSELUG00000002477	si:ch211-93g23.2	78	63.415	Esox_lucius
ENSLBEG00000013961	si:ch211-93g23.2	100	58.088	ENSFHEG00000005204	zgc:162780	99	58.088	Fundulus_heteroclitus
ENSLBEG00000013961	si:ch211-93g23.2	85	58.952	ENSGMOG00000005502	zgc:162780	98	58.952	Gadus_morhua
ENSLBEG00000013961	si:ch211-93g23.2	100	63.941	ENSGAFG00000007683	si:ch211-93g23.2	99	63.941	Gambusia_affinis
ENSLBEG00000013961	si:ch211-93g23.2	100	56.985	ENSGAFG00000018382	zgc:162780	99	56.985	Gambusia_affinis
ENSLBEG00000013961	si:ch211-93g23.2	100	75.368	ENSGACG00000014722	si:ch211-93g23.2	99	75.368	Gasterosteus_aculeatus
ENSLBEG00000013961	si:ch211-93g23.2	100	56.250	ENSHBUG00000000524	zgc:162780	99	56.250	Haplochromis_burtoni
ENSLBEG00000013961	si:ch211-93g23.2	100	76.296	ENSHBUG00000004418	si:ch211-93g23.2	100	76.296	Haplochromis_burtoni
ENSLBEG00000013961	si:ch211-93g23.2	100	57.778	ENSHCOG00000009980	si:ch211-93g23.2	100	57.778	Hippocampus_comes
ENSLBEG00000013961	si:ch211-93g23.2	100	55.147	ENSKMAG00000018418	zgc:162780	97	55.147	Kryptolebias_marmoratus
ENSLBEG00000013961	si:ch211-93g23.2	100	58.088	ENSMAMG00000013237	zgc:162780	99	58.088	Mastacembelus_armatus
ENSLBEG00000013961	si:ch211-93g23.2	100	75.926	ENSMZEG00005014627	si:ch211-93g23.2	100	75.926	Maylandia_zebra
ENSLBEG00000013961	si:ch211-93g23.2	100	56.618	ENSMZEG00005000825	zgc:162780	99	56.618	Maylandia_zebra
ENSLBEG00000013961	si:ch211-93g23.2	90	73.885	ENSMMOG00000019634	si:ch211-93g23.2	95	73.750	Mola_mola
ENSLBEG00000013961	si:ch211-93g23.2	100	56.985	ENSMALG00000012598	zgc:162780	99	56.985	Monopterus_albus
ENSLBEG00000013961	si:ch211-93g23.2	100	56.458	ENSNBRG00000014908	zgc:162780	99	56.458	Neolamprologus_brichardi
ENSLBEG00000013961	si:ch211-93g23.2	100	77.037	ENSNBRG00000019105	si:ch211-93g23.2	100	77.037	Neolamprologus_brichardi
ENSLBEG00000013961	si:ch211-93g23.2	100	78.519	ENSONIG00000013383	si:ch211-93g23.2	100	78.519	Oreochromis_niloticus
ENSLBEG00000013961	si:ch211-93g23.2	100	56.250	ENSONIG00000004462	zgc:162780	99	56.250	Oreochromis_niloticus
ENSLBEG00000013961	si:ch211-93g23.2	100	74.074	ENSORLG00000002372	si:ch211-93g23.2	100	74.074	Oryzias_latipes
ENSLBEG00000013961	si:ch211-93g23.2	100	74.074	ENSORLG00020022021	si:ch211-93g23.2	100	74.074	Oryzias_latipes_hni
ENSLBEG00000013961	si:ch211-93g23.2	100	56.250	ENSORLG00015008510	zgc:162780	99	56.250	Oryzias_latipes_hsok
ENSLBEG00000013961	si:ch211-93g23.2	100	74.444	ENSORLG00015021473	si:ch211-93g23.2	100	74.444	Oryzias_latipes_hsok
ENSLBEG00000013961	si:ch211-93g23.2	100	74.815	ENSOMEG00000013365	si:ch211-93g23.2	100	74.815	Oryzias_melastigma
ENSLBEG00000013961	si:ch211-93g23.2	100	54.779	ENSOMEG00000010679	zgc:162780	99	54.779	Oryzias_melastigma
ENSLBEG00000013961	si:ch211-93g23.2	100	57.565	ENSPKIG00000011610	si:ch211-93g23.2	99	57.565	Paramormyrops_kingsleyae
ENSLBEG00000013961	si:ch211-93g23.2	90	67.089	ENSPMGG00000011829	si:ch211-93g23.2	98	66.265	Periophthalmus_magnuspinnatus
ENSLBEG00000013961	si:ch211-93g23.2	100	68.148	ENSPFOG00000013857	si:ch211-93g23.2	99	68.148	Poecilia_formosa
ENSLBEG00000013961	si:ch211-93g23.2	100	57.721	ENSPFOG00000002781	zgc:162780	99	57.721	Poecilia_formosa
ENSLBEG00000013961	si:ch211-93g23.2	100	57.721	ENSPLAG00000010255	zgc:162780	99	57.721	Poecilia_latipinna
ENSLBEG00000013961	si:ch211-93g23.2	90	74.522	ENSPLAG00000015878	-	97	74.375	Poecilia_latipinna
ENSLBEG00000013961	si:ch211-93g23.2	100	67.159	ENSPMEG00000008837	-	97	74.375	Poecilia_mexicana
ENSLBEG00000013961	si:ch211-93g23.2	100	57.721	ENSPMEG00000000022	zgc:162780	99	57.721	Poecilia_mexicana
ENSLBEG00000013961	si:ch211-93g23.2	99	56.458	ENSPREG00000016480	zgc:162780	96	56.458	Poecilia_reticulata
ENSLBEG00000013961	si:ch211-93g23.2	100	70.000	ENSPREG00000016831	si:ch211-93g23.2	97	76.875	Poecilia_reticulata
ENSLBEG00000013961	si:ch211-93g23.2	100	56.458	ENSPNYG00000009882	zgc:162780	99	56.458	Pundamilia_nyererei
ENSLBEG00000013961	si:ch211-93g23.2	100	75.556	ENSPNYG00000009369	si:ch211-93g23.2	100	75.556	Pundamilia_nyererei
ENSLBEG00000013961	si:ch211-93g23.2	100	53.704	ENSPNAG00000026108	zgc:162780	99	53.704	Pygocentrus_nattereri
ENSLBEG00000013961	si:ch211-93g23.2	100	51.661	ENSSFOG00015018587	si:ch211-93g23.2	99	51.661	Scleropages_formosus
ENSLBEG00000013961	si:ch211-93g23.2	100	59.191	ENSSMAG00000004498	zgc:162780	99	59.191	Scophthalmus_maximus
ENSLBEG00000013961	si:ch211-93g23.2	90	82.166	ENSSDUG00000022311	si:ch211-93g23.2	98	82.500	Seriola_dumerili
ENSLBEG00000013961	si:ch211-93g23.2	100	57.196	ENSSDUG00000010324	zgc:162780	99	57.196	Seriola_dumerili
ENSLBEG00000013961	si:ch211-93g23.2	100	56.985	ENSSLDG00000021444	zgc:162780	99	56.985	Seriola_lalandi_dorsalis
ENSLBEG00000013961	si:ch211-93g23.2	100	78.519	ENSSLDG00000005926	si:ch211-93g23.2	100	78.519	Seriola_lalandi_dorsalis
ENSLBEG00000013961	si:ch211-93g23.2	90	75.796	ENSSPAG00000014251	si:ch211-93g23.2	91	75.625	Stegastes_partitus
ENSLBEG00000013961	si:ch211-93g23.2	100	69.259	ENSTRUG00000014609	si:ch211-93g23.2	99	69.259	Takifugu_rubripes
ENSLBEG00000013961	si:ch211-93g23.2	100	68.889	ENSTNIG00000000686	-	99	68.889	Tetraodon_nigroviridis
ENSLBEG00000013961	si:ch211-93g23.2	100	57.353	ENSXCOG00000014527	zgc:162780	99	57.353	Xiphophorus_couchianus
ENSLBEG00000013961	si:ch211-93g23.2	90	72.611	ENSXCOG00000020437	si:ch211-93g23.2	97	72.500	Xiphophorus_couchianus
ENSLBEG00000013961	si:ch211-93g23.2	100	57.353	ENSXMAG00000026715	zgc:162780	99	57.353	Xiphophorus_maculatus
ENSLBEG00000013961	si:ch211-93g23.2	100	68.889	ENSXMAG00000007855	si:ch211-93g23.2	99	68.889	Xiphophorus_maculatus