EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000014278 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3569 bases
Position: chrFKLU01003965.1:12084-15652
Accession: 109976263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000018505	RRM_1	PF00076.22	1.4e-38	1	3
ENSLBEP00000018505	RRM_1	PF00076.22	1.4e-38	2	3
ENSLBEP00000018505	RRM_1	PF00076.22	1.4e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000019530	-	1377	XM_020626418	ENSLBEP00000018505	439 (aa)	XP_020482074	-

Gene Model

Click here to download ENSLBEG00000014278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000014278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000014278	-	82	43.169	ENSLBEG00000019073	ncl	55	42.597
ENSLBEG00000014278	-	92	99.259	ENSLBEG00000007915	-	70	99.259

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000014278	-	88	61.735	ENSAPOG00000014534	-	64	62.400	Acanthochromis_polyacanthus
ENSLBEG00000014278	-	82	42.896	ENSAPOG00000023888	ncl	54	42.632	Acanthochromis_polyacanthus
ENSLBEG00000014278	-	81	43.611	ENSACIG00000013234	ncl	61	43.272	Amphilophus_citrinellus
ENSLBEG00000014278	-	87	61.697	ENSAOCG00000014792	-	59	62.234	Amphiprion_ocellaris
ENSLBEG00000014278	-	82	43.443	ENSAOCG00000003133	ncl	51	43.158	Amphiprion_ocellaris
ENSLBEG00000014278	-	82	43.443	ENSAPEG00000002769	ncl	51	43.158	Amphiprion_percula
ENSLBEG00000014278	-	87	61.697	ENSAPEG00000013612	-	59	62.234	Amphiprion_percula
ENSLBEG00000014278	-	82	43.716	ENSATEG00000013343	ncl	53	43.299	Anabas_testudineus
ENSLBEG00000014278	-	93	65.083	ENSATEG00000019862	-	79	66.495	Anabas_testudineus
ENSLBEG00000014278	-	81	41.096	ENSAPLG00000012897	-	61	41.406	Anas_platyrhynchos
ENSLBEG00000014278	-	82	42.975	ENSACAG00000001006	-	50	42.480	Anolis_carolinensis
ENSLBEG00000014278	-	72	43.574	ENSACLG00000026031	ncl	87	43.195	Astatotilapia_calliptera
ENSLBEG00000014278	-	82	39.237	ENSAMXG00000001647	ncl	84	42.025	Astyanax_mexicanus
ENSLBEG00000014278	-	82	31.302	ENSCHIG00000012665	-	52	31.267	Capra_hircus
ENSLBEG00000014278	-	59	36.564	ENSCHIG00000003401	-	50	36.245	Capra_hircus
ENSLBEG00000014278	-	82	41.240	ENSCPBG00000016444	-	54	40.633	Chrysemys_picta_bellii
ENSLBEG00000014278	-	85	39.466	ENSCSEG00000015089	ncl	55	41.645	Cynoglossus_semilaevis
ENSLBEG00000014278	-	80	42.975	ENSCVAG00000012600	ncl	53	42.408	Cyprinodon_variegatus
ENSLBEG00000014278	-	89	42.818	ENSDARG00000002710	ncl	83	43.953	Danio_rerio
ENSLBEG00000014278	-	79	33.807	ENSDNOG00000040257	-	58	33.973	Dasypus_novemcinctus
ENSLBEG00000014278	-	80	33.616	ENSDNOG00000031611	-	63	33.962	Dasypus_novemcinctus
ENSLBEG00000014278	-	84	35.580	ENSEBUG00000016173	ncl	50	35.065	Eptatretus_burgeri
ENSLBEG00000014278	-	84	48.907	ENSELUG00000022826	-	84	46.851	Esox_lucius
ENSLBEG00000014278	-	82	43.360	ENSELUG00000006033	ncl	54	44.241	Esox_lucius
ENSLBEG00000014278	-	82	40.541	ENSFALG00000007592	-	54	40.409	Ficedula_albicollis
ENSLBEG00000014278	-	82	43.396	ENSFHEG00000018000	ncl	65	43.112	Fundulus_heteroclitus
ENSLBEG00000014278	-	84	40.921	ENSGMOG00000001341	ncl	56	40.921	Gadus_morhua
ENSLBEG00000014278	-	81	40.274	ENSGALG00000032930	NCL	54	39.589	Gallus_gallus
ENSLBEG00000014278	-	82	42.740	ENSGACG00000008970	ncl	58	41.910	Gasterosteus_aculeatus
ENSLBEG00000014278	-	82	40.701	ENSGAGG00000013330	-	54	40.260	Gopherus_agassizii
ENSLBEG00000014278	-	81	43.017	ENSHBUG00000006869	ncl	52	43.008	Haplochromis_burtoni
ENSLBEG00000014278	-	82	43.869	ENSHCOG00000010234	ncl	50	43.570	Hippocampus_comes
ENSLBEG00000014278	-	72	41.066	ENSIPUG00000024556	ncl	82	40.719	Ictalurus_punctatus
ENSLBEG00000014278	-	82	42.896	ENSKMAG00000008111	ncl	53	42.338	Kryptolebias_marmoratus
ENSLBEG00000014278	-	79	40.169	ENSLACG00000022167	-	77	39.733	Latimeria_chalumnae
ENSLBEG00000014278	-	82	42.818	ENSLACG00000009328	ncl	57	41.645	Latimeria_chalumnae
ENSLBEG00000014278	-	87	63.333	ENSMAMG00000003479	-	69	64.062	Mastacembelus_armatus
ENSLBEG00000014278	-	81	43.017	ENSMZEG00005017438	ncl	52	42.819	Maylandia_zebra
ENSLBEG00000014278	-	83	40.822	ENSMGAG00000008147	-	86	40.476	Meleagris_gallopavo
ENSLBEG00000014278	-	72	42.857	ENSMMOG00000008553	ncl	86	42.308	Mola_mola
ENSLBEG00000014278	-	81	40.984	ENSMODG00000002470	-	52	40.526	Monodelphis_domestica
ENSLBEG00000014278	-	85	41.642	ENSMALG00000014827	ncl	52	41.520	Monopterus_albus
ENSLBEG00000014278	-	66	43.003	ENSNBRG00000000146	-	86	44.295	Neolamprologus_brichardi
ENSLBEG00000014278	-	66	43.003	ENSNBRG00000001232	ncl	82	44.295	Neolamprologus_brichardi
ENSLBEG00000014278	-	81	40.111	ENSMEUG00000012335	-	53	39.683	Notamacropus_eugenii
ENSLBEG00000014278	-	81	43.017	ENSONIG00000012508	ncl	52	43.008	Oreochromis_niloticus
ENSLBEG00000014278	-	82	49.180	ENSONIG00000010631	-	90	49.180	Oreochromis_niloticus
ENSLBEG00000014278	-	81	42.818	ENSOANG00000008732	-	60	42.228	Ornithorhynchus_anatinus
ENSLBEG00000014278	-	82	43.132	ENSORLG00000007055	ncl	52	43.583	Oryzias_latipes
ENSLBEG00000014278	-	88	46.970	ENSORLG00000004645	-	82	47.396	Oryzias_latipes
ENSLBEG00000014278	-	86	46.615	ENSORLG00020003497	-	74	46.615	Oryzias_latipes_hni
ENSLBEG00000014278	-	82	43.132	ENSORLG00020017943	ncl	52	43.583	Oryzias_latipes_hni
ENSLBEG00000014278	-	86	47.917	ENSORLG00015006613	-	76	47.917	Oryzias_latipes_hsok
ENSLBEG00000014278	-	82	42.424	ENSORLG00015013815	ncl	87	43.505	Oryzias_latipes_hsok
ENSLBEG00000014278	-	84	46.900	ENSOMEG00000015864	-	79	46.900	Oryzias_melastigma
ENSLBEG00000014278	-	85	44.505	ENSOMEG00000020786	ncl	52	44.125	Oryzias_melastigma
ENSLBEG00000014278	-	82	44.142	ENSPKIG00000002604	ncl	51	43.799	Paramormyrops_kingsleyae
ENSLBEG00000014278	-	82	41.033	ENSPSIG00000002361	-	52	41.099	Pelodiscus_sinensis
ENSLBEG00000014278	-	82	40.884	ENSPMGG00000004709	ncl	84	41.369	Periophthalmus_magnuspinnatus
ENSLBEG00000014278	-	81	41.047	ENSPCIG00000003293	-	52	41.099	Phascolarctos_cinereus
ENSLBEG00000014278	-	81	43.017	ENSPNYG00000020494	ncl	53	42.559	Pundamilia_nyererei
ENSLBEG00000014278	-	80	37.288	ENSSHAG00000002702	-	56	36.658	Sarcophilus_harrisii
ENSLBEG00000014278	-	83	35.870	ENSSFOG00015013153	-	81	36.982	Scleropages_formosus
ENSLBEG00000014278	-	82	43.478	ENSSFOG00015008583	ncl	56	43.272	Scleropages_formosus
ENSLBEG00000014278	-	82	43.443	ENSSMAG00000021241	ncl	51	43.045	Scophthalmus_maximus
ENSLBEG00000014278	-	85	64.286	ENSSMAG00000007582	-	61	64.660	Scophthalmus_maximus
ENSLBEG00000014278	-	82	42.857	ENSSDUG00000006128	ncl	84	42.559	Seriola_dumerili
ENSLBEG00000014278	-	85	66.230	ENSSDUG00000010922	-	75	63.397	Seriola_dumerili
ENSLBEG00000014278	-	82	42.308	ENSSLDG00000002012	ncl	52	42.338	Seriola_lalandi_dorsalis
ENSLBEG00000014278	-	85	66.230	ENSSLDG00000015784	-	65	66.494	Seriola_lalandi_dorsalis
ENSLBEG00000014278	-	88	39.416	ENSSPUG00000008244	-	63	39.529	Sphenodon_punctatus
ENSLBEG00000014278	-	63	45.230	ENSSPAG00000002637	ncl	81	44.781	Stegastes_partitus
ENSLBEG00000014278	-	85	63.185	ENSSPAG00000001859	-	60	63.612	Stegastes_partitus
ENSLBEG00000014278	-	81	41.484	ENSTGUG00000009782	-	59	41.558	Taeniopygia_guttata
ENSLBEG00000014278	-	81	43.802	ENSTRUG00000008185	ncl	58	41.667	Takifugu_rubripes
ENSLBEG00000014278	-	80	44.444	ENSTNIG00000012186	ncl	60	43.915	Tetraodon_nigroviridis
ENSLBEG00000014278	-	81	44.290	ENSXETG00000009517	ncl	50	44.687	Xenopus_tropicalis
ENSLBEG00000014278	-	85	53.806	ENSXCOG00000007369	-	89	54.839	Xiphophorus_couchianus
ENSLBEG00000014278	-	79	37.535	ENSXCOG00000003524	ncl	87	36.311	Xiphophorus_couchianus