EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000014527 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 883-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 4979 bases
Position: chrFKLU01001275.1:44319-49297
Accession: 110003759
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000018894	zf-met	PF12874.7	4.5e-14	1	2
ENSLBEP00000018894	zf-met	PF12874.7	4.5e-14	2	2
ENSLBEP00000018884	zf-met	PF12874.7	6.6e-14	1	2
ENSLBEP00000018884	zf-met	PF12874.7	6.6e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000019914	-	3653	-	ENSLBEP00000018884	651 (aa)	-	-
ENSLBET00000019924	-	3581	XM_020659316	ENSLBEP00000018894	627 (aa)	XP_020514972	-

Gene Model

Click here to download ENSLBEG00000014527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000014527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000014527	-	52	34.872	ENSLBEG00000008689	-	88	35.664
ENSLBEG00000014527	-	58	33.990	ENSLBEG00000002278	-	73	33.990
ENSLBEG00000014527	-	50	38.028	ENSLBEG00000001756	-	90	39.286
ENSLBEG00000014527	-	55	32.271	ENSLBEG00000008606	-	97	37.795
ENSLBEG00000014527	-	56	38.298	ENSLBEG00000009580	-	82	38.298
ENSLBEG00000014527	-	56	52.722	ENSLBEG00000013235	-	83	57.762
ENSLBEG00000014527	-	54	36.224	ENSLBEG00000008115	-	90	37.931
ENSLBEG00000014527	-	54	40.090	ENSLBEG00000024737	-	93	39.604
ENSLBEG00000014527	-	50	37.615	ENSLBEG00000021260	-	87	37.615
ENSLBEG00000014527	-	55	38.806	ENSLBEG00000004892	-	81	38.049
ENSLBEG00000014527	-	61	38.798	ENSLBEG00000011250	-	55	37.824
ENSLBEG00000014527	-	51	36.970	ENSLBEG00000015694	-	82	37.500
ENSLBEG00000014527	-	55	39.234	ENSLBEG00000000343	-	76	37.885
ENSLBEG00000014527	-	58	37.500	ENSLBEG00000002357	-	89	36.863
ENSLBEG00000014527	-	56	37.624	ENSLBEG00000009567	-	73	36.937
ENSLBEG00000014527	-	59	39.773	ENSLBEG00000005307	znf236	64	39.773
ENSLBEG00000014527	-	58	39.109	ENSLBEG00000013570	-	100	39.394
ENSLBEG00000014527	-	57	31.273	ENSLBEG00000011028	-	69	36.502
ENSLBEG00000014527	-	55	40.816	ENSLBEG00000011289	-	57	40.816
ENSLBEG00000014527	-	50	39.355	ENSLBEG00000011349	-	67	38.125
ENSLBEG00000014527	-	51	35.754	ENSLBEG00000018970	-	82	37.946
ENSLBEG00000014527	-	56	33.010	ENSLBEG00000011313	-	61	37.313
ENSLBEG00000014527	-	51	39.450	ENSLBEG00000008733	-	63	39.450
ENSLBEG00000014527	-	56	38.776	ENSLBEG00000010278	-	96	39.556
ENSLBEG00000014527	-	50	37.427	ENSLBEG00000000369	-	89	37.086
ENSLBEG00000014527	-	98	99.843	ENSLBEG00000008320	-	98	99.843
ENSLBEG00000014527	-	51	41.045	ENSLBEG00000020461	-	55	50.980
ENSLBEG00000014527	-	50	34.524	ENSLBEG00000004805	-	79	38.839
ENSLBEG00000014527	-	52	33.495	ENSLBEG00000024536	-	87	32.883
ENSLBEG00000014527	-	55	38.750	ENSLBEG00000011465	-	76	39.200
ENSLBEG00000014527	-	54	40.625	ENSLBEG00000011006	-	64	41.538
ENSLBEG00000014527	-	56	38.222	ENSLBEG00000000373	-	90	38.222
ENSLBEG00000014527	-	56	41.228	ENSLBEG00000007937	-	71	39.860
ENSLBEG00000014527	-	56	38.532	ENSLBEG00000011145	si:cabz01071911.3	79	38.683
ENSLBEG00000014527	-	54	38.095	ENSLBEG00000004833	-	63	39.732
ENSLBEG00000014527	-	54	39.869	ENSLBEG00000014282	-	98	39.773
ENSLBEG00000014527	-	55	80.124	ENSLBEG00000024454	-	68	80.124
ENSLBEG00000014527	-	50	34.454	ENSLBEG00000026573	-	63	34.454
ENSLBEG00000014527	-	50	34.302	ENSLBEG00000005715	-	78	34.302

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000014527	-	50	38.182	ENSAPEG00000011635	-	65	36.765	Amphiprion_percula
ENSLBEG00000014527	-	57	33.641	ENSATEG00000024549	-	51	36.275	Anabas_testudineus
ENSLBEG00000014527	-	63	47.368	ENSATEG00000011202	-	79	47.458	Anabas_testudineus
ENSLBEG00000014527	-	55	37.500	ENSCVAG00000004508	-	57	37.500	Cyprinodon_variegatus
ENSLBEG00000014527	-	54	42.373	ENSELUG00000008171	-	61	42.373	Esox_lucius
ENSLBEG00000014527	-	60	33.908	ENSIPUG00000009577	-	52	31.373	Ictalurus_punctatus
ENSLBEG00000014527	-	55	33.143	ENSKMAG00000000520	-	54	33.143	Kryptolebias_marmoratus
ENSLBEG00000014527	-	51	35.160	ENSMALG00000014761	-	62	35.160	Monopterus_albus
ENSLBEG00000014527	-	50	58.333	ENSNBRG00000013838	-	58	58.333	Neolamprologus_brichardi
ENSLBEG00000014527	-	57	35.808	ENSNBRG00000024051	-	53	35.808	Neolamprologus_brichardi
ENSLBEG00000014527	-	96	34.257	ENSOMEG00000021397	-	69	55.405	Oryzias_melastigma
ENSLBEG00000014527	-	52	38.514	ENSOMEG00000015640	-	71	38.514	Oryzias_melastigma
ENSLBEG00000014527	-	67	34.940	ENSPFOG00000012948	-	72	41.538	Poecilia_formosa
ENSLBEG00000014527	-	61	43.636	ENSPLAG00000009651	-	60	39.716	Poecilia_latipinna
ENSLBEG00000014527	-	65	33.969	ENSPMEG00000023113	-	72	33.969	Poecilia_mexicana
ENSLBEG00000014527	-	56	39.521	ENSPNYG00000019187	-	83	32.979	Pundamilia_nyererei
ENSLBEG00000014527	-	51	37.387	ENSPNYG00000023882	-	72	35.628	Pundamilia_nyererei