EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000014578 (Gene tree)
Gene ID: 109996555
Gene Symbol: lig4
Alias: zgc:165595
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5940 bases
Position: chrFKLU01000373.1:44429-50368
Accession: 109996555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000018958	RNA_ligase	PF09414.10	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000019989	-	3688	XM_020650735	ENSLBEP00000018958	827 (aa)	XP_020506391	-

Gene Model

Click here to download ENSLBEG00000014578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000014578's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000014578	lig4	100	66.587	ENSG00000174405	LIG4	99	66.346	Homo_sapiens
ENSLBEG00000014578	lig4	100	90.931	ENSAPOG00000000866	lig4	91	90.931	Acanthochromis_polyacanthus
ENSLBEG00000014578	lig4	100	65.024	ENSAMEG00000019685	LIG4	91	64.663	Ailuropoda_melanoleuca
ENSLBEG00000014578	lig4	99	89.091	ENSACIG00000018309	lig4	91	89.091	Amphilophus_citrinellus
ENSLBEG00000014578	lig4	100	90.810	ENSAOCG00000011768	lig4	91	90.810	Amphiprion_ocellaris
ENSLBEG00000014578	lig4	100	91.052	ENSAPEG00000017815	lig4	91	91.052	Amphiprion_percula
ENSLBEG00000014578	lig4	100	89.601	ENSATEG00000005583	lig4	91	89.601	Anabas_testudineus
ENSLBEG00000014578	lig4	100	67.189	ENSAPLG00000001673	LIG4	94	67.189	Anas_platyrhynchos
ENSLBEG00000014578	lig4	100	67.715	ENSACAG00000014566	LIG4	91	67.715	Anolis_carolinensis
ENSLBEG00000014578	lig4	100	66.106	ENSANAG00000012446	LIG4	91	65.865	Aotus_nancymaae
ENSLBEG00000014578	lig4	99	88.242	ENSACLG00000027051	lig4	91	88.242	Astatotilapia_calliptera
ENSLBEG00000014578	lig4	99	79.030	ENSAMXG00000008192	lig4	85	79.030	Astyanax_mexicanus
ENSLBEG00000014578	lig4	100	65.745	ENSBTAG00000015868	LIG4	91	65.505	Bos_taurus
ENSLBEG00000014578	lig4	100	65.505	ENSCJAG00000014689	LIG4	91	65.264	Callithrix_jacchus
ENSLBEG00000014578	lig4	100	65.986	ENSCAFG00000006031	LIG4	91	65.745	Canis_familiaris
ENSLBEG00000014578	lig4	100	65.986	ENSCAFG00020021230	LIG4	91	65.745	Canis_lupus_dingo
ENSLBEG00000014578	lig4	100	65.745	ENSCHIG00000001019	LIG4	91	65.505	Capra_hircus
ENSLBEG00000014578	lig4	100	65.986	ENSCAPG00000006284	LIG4	92	65.745	Cavia_aperea
ENSLBEG00000014578	lig4	100	65.865	ENSCPOG00000014266	LIG4	91	65.625	Cavia_porcellus
ENSLBEG00000014578	lig4	100	66.466	ENSCCAG00000019971	LIG4	91	66.226	Cebus_capucinus
ENSLBEG00000014578	lig4	100	66.226	ENSCATG00000021075	LIG4	91	65.986	Cercocebus_atys
ENSLBEG00000014578	lig4	100	65.827	ENSCLAG00000003376	LIG4	91	65.588	Chinchilla_lanigera
ENSLBEG00000014578	lig4	100	66.106	ENSCSAG00000000211	LIG4	91	65.865	Chlorocebus_sabaeus
ENSLBEG00000014578	lig4	100	68.313	ENSCPBG00000023291	LIG4	91	68.313	Chrysemys_picta_bellii
ENSLBEG00000014578	lig4	67	48.673	ENSCING00000009536	-	86	48.673	Ciona_intestinalis
ENSLBEG00000014578	lig4	83	46.299	ENSCSAVG00000010336	-	89	46.299	Ciona_savignyi
ENSLBEG00000014578	lig4	100	65.986	ENSCANG00000005805	LIG4	91	65.745	Colobus_angolensis_palliatus
ENSLBEG00000014578	lig4	99	65.223	ENSCGRG00001012072	Lig4	91	65.223	Cricetulus_griseus_chok1gshd
ENSLBEG00000014578	lig4	99	65.223	ENSCGRG00000013417	Lig4	91	65.223	Cricetulus_griseus_crigri
ENSLBEG00000014578	lig4	97	85.323	ENSCSEG00000013905	lig4	87	85.323	Cynoglossus_semilaevis
ENSLBEG00000014578	lig4	100	87.440	ENSCVAG00000007896	lig4	91	87.440	Cyprinodon_variegatus
ENSLBEG00000014578	lig4	100	78.476	ENSDARG00000060620	lig4	91	78.476	Danio_rerio
ENSLBEG00000014578	lig4	100	65.269	ENSDNOG00000000513	LIG4	91	65.030	Dasypus_novemcinctus
ENSLBEG00000014578	lig4	100	65.745	ENSDORG00000027303	Lig4	91	65.625	Dipodomys_ordii
ENSLBEG00000014578	lig4	93	31.095	FBgn0030506	Lig4	85	31.095	Drosophila_melanogaster
ENSLBEG00000014578	lig4	100	62.905	ENSETEG00000015563	LIG4	92	63.145	Echinops_telfairi
ENSLBEG00000014578	lig4	99	44.111	ENSEBUG00000014243	lig4	90	43.880	Eptatretus_burgeri
ENSLBEG00000014578	lig4	100	64.663	ENSEASG00005022073	LIG4	91	64.543	Equus_asinus_asinus
ENSLBEG00000014578	lig4	100	64.663	ENSECAG00000003257	LIG4	91	64.543	Equus_caballus
ENSLBEG00000014578	lig4	100	82.530	ENSELUG00000006787	lig4	91	82.651	Esox_lucius
ENSLBEG00000014578	lig4	100	65.024	ENSFCAG00000031985	LIG4	91	64.663	Felis_catus
ENSLBEG00000014578	lig4	88	69.793	ENSFALG00000004214	LIG4	88	69.793	Ficedula_albicollis
ENSLBEG00000014578	lig4	100	65.385	ENSFDAG00000008973	LIG4	91	65.144	Fukomys_damarensis
ENSLBEG00000014578	lig4	100	86.457	ENSFHEG00000007398	lig4	82	86.457	Fundulus_heteroclitus
ENSLBEG00000014578	lig4	85	78.805	ENSGMOG00000012843	lig4	90	78.805	Gadus_morhua
ENSLBEG00000014578	lig4	100	66.104	ENSGALG00000016854	LIG4	91	66.104	Gallus_gallus
ENSLBEG00000014578	lig4	99	85.490	ENSGAFG00000019779	lig4	87	85.490	Gambusia_affinis
ENSLBEG00000014578	lig4	100	86.820	ENSGACG00000014135	lig4	91	86.941	Gasterosteus_aculeatus
ENSLBEG00000014578	lig4	100	66.466	ENSGGOG00000027771	LIG4	91	66.226	Gorilla_gorilla
ENSLBEG00000014578	lig4	99	88.000	ENSHBUG00000006245	lig4	91	88.000	Haplochromis_burtoni
ENSLBEG00000014578	lig4	100	65.509	ENSHGLG00000000718	LIG4	91	65.269	Heterocephalus_glaber_female
ENSLBEG00000014578	lig4	100	65.509	ENSHGLG00100003265	LIG4	91	65.269	Heterocephalus_glaber_male
ENSLBEG00000014578	lig4	100	82.850	ENSHCOG00000012010	lig4	91	82.850	Hippocampus_comes
ENSLBEG00000014578	lig4	100	77.751	ENSIPUG00000013748	lig4	91	77.751	Ictalurus_punctatus
ENSLBEG00000014578	lig4	100	65.986	ENSSTOG00000024303	LIG4	91	65.745	Ictidomys_tridecemlineatus
ENSLBEG00000014578	lig4	99	65.060	ENSJJAG00000006750	Lig4	91	64.699	Jaculus_jaculus
ENSLBEG00000014578	lig4	99	85.091	ENSKMAG00000001149	lig4	91	85.091	Kryptolebias_marmoratus
ENSLBEG00000014578	lig4	100	68.478	ENSLACG00000003282	LIG4	91	68.478	Latimeria_chalumnae
ENSLBEG00000014578	lig4	100	73.462	ENSLOCG00000008901	lig4	90	73.462	Lepisosteus_oculatus
ENSLBEG00000014578	lig4	100	64.628	ENSLAFG00000031152	LIG4	91	64.508	Loxodonta_africana
ENSLBEG00000014578	lig4	100	65.986	ENSMFAG00000037235	LIG4	91	65.745	Macaca_fascicularis
ENSLBEG00000014578	lig4	100	65.865	ENSMMUG00000008874	LIG4	91	65.625	Macaca_mulatta
ENSLBEG00000014578	lig4	100	65.986	ENSMNEG00000023575	LIG4	91	65.745	Macaca_nemestrina
ENSLBEG00000014578	lig4	100	66.106	ENSMLEG00000026720	LIG4	91	65.865	Mandrillus_leucophaeus
ENSLBEG00000014578	lig4	100	88.634	ENSMAMG00000008472	lig4	90	88.634	Mastacembelus_armatus
ENSLBEG00000014578	lig4	99	88.121	ENSMZEG00005001855	lig4	91	88.121	Maylandia_zebra
ENSLBEG00000014578	lig4	100	66.104	ENSMGAG00000015532	LIG4	91	66.104	Meleagris_gallopavo
ENSLBEG00000014578	lig4	99	64.346	ENSMOCG00000019000	Lig4	91	64.346	Microtus_ochrogaster
ENSLBEG00000014578	lig4	100	89.480	ENSMMOG00000004390	lig4	91	89.480	Mola_mola
ENSLBEG00000014578	lig4	100	65.786	ENSMODG00000025064	LIG4	91	65.666	Monodelphis_domestica
ENSLBEG00000014578	lig4	100	88.029	ENSMALG00000008555	lig4	91	88.029	Monopterus_albus
ENSLBEG00000014578	lig4	99	65.422	MGP_CAROLIEiJ_G0030809	Lig4	91	65.301	Mus_caroli
ENSLBEG00000014578	lig4	99	65.663	ENSMUSG00000049717	Lig4	91	65.542	Mus_musculus
ENSLBEG00000014578	lig4	99	65.542	MGP_PahariEiJ_G0021270	Lig4	91	65.542	Mus_pahari
ENSLBEG00000014578	lig4	99	65.904	MGP_SPRETEiJ_G0031917	Lig4	91	65.783	Mus_spretus
ENSLBEG00000014578	lig4	100	65.144	ENSMPUG00000018675	LIG4	91	64.904	Mustela_putorius_furo
ENSLBEG00000014578	lig4	100	65.505	ENSMLUG00000001267	LIG4	91	65.264	Myotis_lucifugus
ENSLBEG00000014578	lig4	99	65.422	ENSNGAG00000013258	Lig4	91	65.301	Nannospalax_galili
ENSLBEG00000014578	lig4	99	88.242	ENSNBRG00000021252	lig4	91	88.242	Neolamprologus_brichardi
ENSLBEG00000014578	lig4	100	65.865	ENSNLEG00000007888	LIG4	91	65.625	Nomascus_leucogenys
ENSLBEG00000014578	lig4	99	65.060	ENSOPRG00000005765	LIG4	91	64.940	Ochotona_princeps
ENSLBEG00000014578	lig4	100	65.625	ENSODEG00000019683	LIG4	91	65.385	Octodon_degus
ENSLBEG00000014578	lig4	99	88.606	ENSONIG00000011969	lig4	89	88.606	Oreochromis_niloticus
ENSLBEG00000014578	lig4	100	65.625	ENSOCUG00000015734	LIG4	91	65.505	Oryctolagus_cuniculus
ENSLBEG00000014578	lig4	100	84.337	ENSORLG00000004041	lig4	91	84.337	Oryzias_latipes
ENSLBEG00000014578	lig4	100	84.458	ENSORLG00020019607	lig4	91	84.458	Oryzias_latipes_hni
ENSLBEG00000014578	lig4	100	84.699	ENSORLG00015017754	lig4	91	84.699	Oryzias_latipes_hsok
ENSLBEG00000014578	lig4	73	90.579	ENSOMEG00000003459	lig4	88	90.579	Oryzias_melastigma
ENSLBEG00000014578	lig4	100	66.106	ENSOGAG00000032120	LIG4	91	65.986	Otolemur_garnettii
ENSLBEG00000014578	lig4	80	70.721	ENSOARG00000005590	LIG4	88	70.721	Ovis_aries
ENSLBEG00000014578	lig4	100	66.346	ENSPPAG00000032998	LIG4	91	66.106	Pan_paniscus
ENSLBEG00000014578	lig4	100	65.264	ENSPPRG00000017804	LIG4	91	64.904	Panthera_pardus
ENSLBEG00000014578	lig4	100	65.385	ENSPTIG00000010051	LIG4	91	65.024	Panthera_tigris_altaica
ENSLBEG00000014578	lig4	100	66.466	ENSPTRG00000006025	LIG4	91	66.226	Pan_troglodytes
ENSLBEG00000014578	lig4	100	66.346	ENSPANG00000007562	LIG4	91	66.106	Papio_anubis
ENSLBEG00000014578	lig4	100	77.805	ENSPKIG00000011645	lig4	90	77.805	Paramormyrops_kingsleyae
ENSLBEG00000014578	lig4	100	67.995	ENSPSIG00000001504	LIG4	91	67.754	Pelodiscus_sinensis
ENSLBEG00000014578	lig4	100	80.314	ENSPMGG00000013486	lig4	90	80.314	Periophthalmus_magnuspinnatus
ENSLBEG00000014578	lig4	99	64.501	ENSPEMG00000000076	Lig4	91	64.380	Peromyscus_maniculatus_bairdii
ENSLBEG00000014578	lig4	100	65.426	ENSPCIG00000021882	LIG4	91	65.306	Phascolarctos_cinereus
ENSLBEG00000014578	lig4	100	86.699	ENSPFOG00000000797	lig4	91	86.699	Poecilia_formosa
ENSLBEG00000014578	lig4	100	86.578	ENSPLAG00000001196	lig4	91	86.578	Poecilia_latipinna
ENSLBEG00000014578	lig4	100	86.699	ENSPMEG00000021353	lig4	91	86.699	Poecilia_mexicana
ENSLBEG00000014578	lig4	100	86.094	ENSPREG00000007323	lig4	91	86.094	Poecilia_reticulata
ENSLBEG00000014578	lig4	100	66.106	ENSPPYG00000005540	LIG4	91	65.865	Pongo_abelii
ENSLBEG00000014578	lig4	100	65.264	ENSPVAG00000016403	LIG4	91	64.790	Pteropus_vampyrus
ENSLBEG00000014578	lig4	99	88.121	ENSPNYG00000009660	lig4	91	88.121	Pundamilia_nyererei
ENSLBEG00000014578	lig4	99	80.314	ENSPNAG00000028056	lig4	91	80.314	Pygocentrus_nattereri
ENSLBEG00000014578	lig4	99	80.314	ENSPNAG00000028069	LIG4	91	80.314	Pygocentrus_nattereri
ENSLBEG00000014578	lig4	99	65.542	ENSRNOG00000014605	Lig4	91	65.422	Rattus_norvegicus
ENSLBEG00000014578	lig4	100	66.587	ENSRBIG00000039962	LIG4	92	66.346	Rhinopithecus_bieti
ENSLBEG00000014578	lig4	100	66.466	ENSRROG00000006040	LIG4	91	66.226	Rhinopithecus_roxellana
ENSLBEG00000014578	lig4	100	66.226	ENSSBOG00000019029	LIG4	91	65.986	Saimiri_boliviensis_boliviensis
ENSLBEG00000014578	lig4	100	62.665	ENSSHAG00000009525	LIG4	91	62.785	Sarcophilus_harrisii
ENSLBEG00000014578	lig4	100	79.081	ENSSFOG00015012835	lig4	91	79.081	Scleropages_formosus
ENSLBEG00000014578	lig4	100	83.797	ENSSMAG00000011267	lig4	91	83.797	Scophthalmus_maximus
ENSLBEG00000014578	lig4	100	87.952	ENSSDUG00000010343	lig4	91	87.952	Seriola_dumerili
ENSLBEG00000014578	lig4	100	86.747	ENSSLDG00000003239	lig4	91	86.867	Seriola_lalandi_dorsalis
ENSLBEG00000014578	lig4	100	63.723	ENSSARG00000006573	LIG4	91	63.604	Sorex_araneus
ENSLBEG00000014578	lig4	100	68.478	ENSSPUG00000002444	LIG4	99	68.357	Sphenodon_punctatus
ENSLBEG00000014578	lig4	100	89.601	ENSSPAG00000001609	lig4	91	89.601	Stegastes_partitus
ENSLBEG00000014578	lig4	100	65.584	ENSSSCG00000009540	LIG4	91	65.223	Sus_scrofa
ENSLBEG00000014578	lig4	100	66.224	ENSTGUG00000010795	LIG4	91	66.224	Taeniopygia_guttata
ENSLBEG00000014578	lig4	100	87.304	ENSTRUG00000009984	lig4	91	87.304	Takifugu_rubripes
ENSLBEG00000014578	lig4	100	85.127	ENSTNIG00000010348	lig4	91	85.369	Tetraodon_nigroviridis
ENSLBEG00000014578	lig4	100	65.264	ENSTBEG00000017741	LIG4	91	65.264	Tupaia_belangeri
ENSLBEG00000014578	lig4	99	65.301	ENSTTRG00000012660	LIG4	91	65.060	Tursiops_truncatus
ENSLBEG00000014578	lig4	100	64.543	ENSUAMG00000003773	LIG4	91	64.183	Ursus_americanus
ENSLBEG00000014578	lig4	98	68.221	ENSXETG00000002654	lig4	89	68.221	Xenopus_tropicalis
ENSLBEG00000014578	lig4	100	86.578	ENSXCOG00000017401	lig4	91	86.578	Xiphophorus_couchianus
ENSLBEG00000014578	lig4	100	86.941	ENSXMAG00000015142	lig4	91	86.941	Xiphophorus_maculatus