EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000014617 (Gene tree)
Gene ID: 110000614
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 12290 bases
Position: chrFKLU01000693.1:130527-142816
Accession: 110000614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000019063	ResIII	PF04851.15	6.5e-09	1	1
ENSLBEP00000019096	ResIII	PF04851.15	7.2e-09	1	1
ENSLBEP00000019063	DEAD	PF00270.29	4.9e-06	1	1
ENSLBEP00000019096	DEAD	PF00270.29	5.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000020094	-	3422	-	ENSLBEP00000019063	692 (aa)	-	-
ENSLBET00000020127	-	3264	XM_020655941	ENSLBEP00000019096	744 (aa)	XP_020511597	UPI0009B49781

Gene Model

Click here to download ENSLBEG00000014617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000014617's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000014617	rad54l	72	31.496	ENSLBEG00000023845	chd1l	50	30.898
ENSLBEG00000014617	rad54l	68	31.847	ENSLBEG00000013295	SMARCA1	51	30.963
ENSLBEG00000014617	rad54l	76	30.935	ENSLBEG00000000091	ercc6l	54	30.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000014617	rad54l	99	82.190	ENSG00000085999	RAD54L	100	86.667	Homo_sapiens
ENSLBEG00000014617	rad54l	99	90.082	ENSAPOG00000011643	rad54l	99	90.082	Acanthochromis_polyacanthus
ENSLBEG00000014617	rad54l	99	81.606	ENSAMEG00000013902	RAD54L	99	79.273	Ailuropoda_melanoleuca
ENSLBEG00000014617	rad54l	99	88.451	ENSACIG00000001939	rad54l	99	88.451	Amphilophus_citrinellus
ENSLBEG00000014617	rad54l	99	93.207	ENSAOCG00000017576	rad54l	99	93.207	Amphiprion_ocellaris
ENSLBEG00000014617	rad54l	97	94.784	ENSAPEG00000020658	rad54l	98	92.968	Amphiprion_percula
ENSLBEG00000014617	rad54l	97	94.048	ENSATEG00000006767	rad54l	99	93.276	Anabas_testudineus
ENSLBEG00000014617	rad54l	97	84.673	ENSAPLG00000006389	RAD54L	99	83.788	Anas_platyrhynchos
ENSLBEG00000014617	rad54l	98	84.064	ENSACAG00000002312	RAD54L	99	82.051	Anolis_carolinensis
ENSLBEG00000014617	rad54l	99	82.336	ENSANAG00000035439	RAD54L	99	80.914	Aotus_nancymaae
ENSLBEG00000014617	rad54l	97	90.313	ENSACLG00000018711	rad54l	99	88.179	Astatotilapia_calliptera
ENSLBEG00000014617	rad54l	97	90.327	ENSAMXG00000012777	rad54l	99	87.686	Astyanax_mexicanus
ENSLBEG00000014617	rad54l	99	82.336	ENSBTAG00000019901	RAD54L	99	80.268	Bos_taurus
ENSLBEG00000014617	rad54l	97	59.077	WBGene00004298	rad-54	84	58.009	Caenorhabditis_elegans
ENSLBEG00000014617	rad54l	99	80.552	ENSCJAG00000021080	RAD54L	94	81.172	Callithrix_jacchus
ENSLBEG00000014617	rad54l	99	81.606	ENSCAFG00000004272	RAD54L	99	79.435	Canis_familiaris
ENSLBEG00000014617	rad54l	99	81.606	ENSCAFG00020015066	RAD54L	99	79.408	Canis_lupus_dingo
ENSLBEG00000014617	rad54l	99	82.190	ENSCHIG00000020118	RAD54L	99	80.108	Capra_hircus
ENSLBEG00000014617	rad54l	99	81.752	ENSTSYG00000002032	RAD54L	99	79.732	Carlito_syrichta
ENSLBEG00000014617	rad54l	99	82.190	ENSCPOG00000006768	RAD54L	99	80.780	Cavia_porcellus
ENSLBEG00000014617	rad54l	99	82.482	ENSCCAG00000025783	RAD54L	99	81.048	Cebus_capucinus
ENSLBEG00000014617	rad54l	99	82.336	ENSCATG00000030589	RAD54L	99	80.645	Cercocebus_atys
ENSLBEG00000014617	rad54l	99	82.482	ENSCLAG00000004645	RAD54L	99	81.048	Chinchilla_lanigera
ENSLBEG00000014617	rad54l	99	82.190	ENSCSAG00000001229	RAD54L	99	80.645	Chlorocebus_sabaeus
ENSLBEG00000014617	rad54l	97	84.375	ENSCPBG00000005675	RAD54L	99	81.781	Chrysemys_picta_bellii
ENSLBEG00000014617	rad54l	98	67.151	ENSCING00000024456	-	99	62.953	Ciona_intestinalis
ENSLBEG00000014617	rad54l	98	67.257	ENSCSAVG00000010859	-	99	62.910	Ciona_savignyi
ENSLBEG00000014617	rad54l	99	82.336	ENSCANG00000034891	RAD54L	99	80.645	Colobus_angolensis_palliatus
ENSLBEG00000014617	rad54l	99	81.752	ENSCGRG00001014807	Rad54l	99	80.189	Cricetulus_griseus_chok1gshd
ENSLBEG00000014617	rad54l	99	81.752	ENSCGRG00000016038	Rad54l	99	80.189	Cricetulus_griseus_crigri
ENSLBEG00000014617	rad54l	98	93.796	ENSCSEG00000001983	rad54l	99	89.402	Cynoglossus_semilaevis
ENSLBEG00000014617	rad54l	92	91.020	ENSCVAG00000019561	rad54l	99	91.020	Cyprinodon_variegatus
ENSLBEG00000014617	rad54l	97	89.137	ENSDARG00000018623	rad54l	99	86.431	Danio_rerio
ENSLBEG00000014617	rad54l	99	80.876	ENSDNOG00000003395	RAD54L	99	79.032	Dasypus_novemcinctus
ENSLBEG00000014617	rad54l	97	76.686	ENSDORG00000002632	Rad54l	99	72.776	Dipodomys_ordii
ENSLBEG00000014617	rad54l	96	57.589	FBgn0002989	okr	95	54.021	Drosophila_melanogaster
ENSLBEG00000014617	rad54l	75	81.955	ENSETEG00000000550	RAD54L	77	79.039	Echinops_telfairi
ENSLBEG00000014617	rad54l	99	81.606	ENSEASG00005004511	RAD54L	99	79.677	Equus_asinus_asinus
ENSLBEG00000014617	rad54l	99	81.752	ENSECAG00000008760	RAD54L	99	80.108	Equus_caballus
ENSLBEG00000014617	rad54l	97	82.493	ENSEEUG00000008113	RAD54L	99	76.747	Erinaceus_europaeus
ENSLBEG00000014617	rad54l	99	90.511	ENSELUG00000002295	rad54l	99	88.679	Esox_lucius
ENSLBEG00000014617	rad54l	99	81.314	ENSFCAG00000003444	RAD54L	99	79.032	Felis_catus
ENSLBEG00000014617	rad54l	97	84.375	ENSFALG00000009480	RAD54L	99	81.781	Ficedula_albicollis
ENSLBEG00000014617	rad54l	99	82.044	ENSFDAG00000007806	RAD54L	99	80.108	Fukomys_damarensis
ENSLBEG00000014617	rad54l	62	86.682	ENSFHEG00000009824	rad54l	83	81.497	Fundulus_heteroclitus
ENSLBEG00000014617	rad54l	99	88.905	ENSGMOG00000014568	rad54l	99	87.772	Gadus_morhua
ENSLBEG00000014617	rad54l	97	84.226	ENSGALG00000010356	RAD54L	92	81.892	Gallus_gallus
ENSLBEG00000014617	rad54l	88	89.819	ENSGAFG00000011110	rad54l	100	86.647	Gambusia_affinis
ENSLBEG00000014617	rad54l	99	92.005	ENSGACG00000003111	rad54l	97	92.005	Gasterosteus_aculeatus
ENSLBEG00000014617	rad54l	97	83.482	ENSGAGG00000014089	RAD54L	96	80.946	Gopherus_agassizii
ENSLBEG00000014617	rad54l	99	82.336	ENSGGOG00000010602	RAD54L	99	80.645	Gorilla_gorilla
ENSLBEG00000014617	rad54l	97	90.462	ENSHBUG00000007793	rad54l	99	88.315	Haplochromis_burtoni
ENSLBEG00000014617	rad54l	99	82.336	ENSHGLG00000000753	RAD54L	99	81.048	Heterocephalus_glaber_female
ENSLBEG00000014617	rad54l	99	82.336	ENSHGLG00100016987	RAD54L	99	80.914	Heterocephalus_glaber_male
ENSLBEG00000014617	rad54l	99	88.012	ENSIPUG00000015999	rad54l	99	88.040	Ictalurus_punctatus
ENSLBEG00000014617	rad54l	99	81.606	ENSSTOG00000029125	RAD54L	99	79.839	Ictidomys_tridecemlineatus
ENSLBEG00000014617	rad54l	99	67.564	ENSJJAG00000000235	-	99	67.429	Jaculus_jaculus
ENSLBEG00000014617	rad54l	97	90.923	ENSKMAG00000009944	rad54l	99	87.924	Kryptolebias_marmoratus
ENSLBEG00000014617	rad54l	97	88.988	ENSLOCG00000004144	rad54l	100	87.519	Lepisosteus_oculatus
ENSLBEG00000014617	rad54l	99	81.314	ENSLAFG00000007583	RAD54L	99	79.946	Loxodonta_africana
ENSLBEG00000014617	rad54l	99	82.336	ENSMFAG00000031241	RAD54L	99	80.780	Macaca_fascicularis
ENSLBEG00000014617	rad54l	99	82.336	ENSMMUG00000011568	RAD54L	99	80.780	Macaca_mulatta
ENSLBEG00000014617	rad54l	99	82.190	ENSMNEG00000038562	RAD54L	99	80.645	Macaca_nemestrina
ENSLBEG00000014617	rad54l	99	82.336	ENSMLEG00000038145	RAD54L	99	80.780	Mandrillus_leucophaeus
ENSLBEG00000014617	rad54l	98	91.324	ENSMAMG00000022180	rad54l	99	91.815	Mastacembelus_armatus
ENSLBEG00000014617	rad54l	97	90.164	ENSMZEG00005018081	rad54l	99	88.043	Maylandia_zebra
ENSLBEG00000014617	rad54l	97	84.226	ENSMGAG00000010634	RAD54L	99	81.867	Meleagris_gallopavo
ENSLBEG00000014617	rad54l	99	82.190	ENSMAUG00000020076	Rad54l	99	80.863	Mesocricetus_auratus
ENSLBEG00000014617	rad54l	99	82.190	ENSMICG00000003266	RAD54L	99	80.511	Microcebus_murinus
ENSLBEG00000014617	rad54l	99	82.482	ENSMOCG00000001778	Rad54l	99	80.863	Microtus_ochrogaster
ENSLBEG00000014617	rad54l	97	90.179	ENSMALG00000021148	rad54l	99	87.821	Monopterus_albus
ENSLBEG00000014617	rad54l	95	82.219	MGP_CAROLIEiJ_G0026325	Rad54l	99	76.209	Mus_caroli
ENSLBEG00000014617	rad54l	99	81.752	ENSMUSG00000028702	Rad54l	99	80.242	Mus_musculus
ENSLBEG00000014617	rad54l	99	82.044	MGP_PahariEiJ_G0028657	Rad54l	99	80.350	Mus_pahari
ENSLBEG00000014617	rad54l	99	81.898	MGP_SPRETEiJ_G0027297	Rad54l	99	80.376	Mus_spretus
ENSLBEG00000014617	rad54l	99	81.633	ENSMPUG00000012883	RAD54L	99	79.167	Mustela_putorius_furo
ENSLBEG00000014617	rad54l	99	82.190	ENSMLUG00000003763	RAD54L	99	80.350	Myotis_lucifugus
ENSLBEG00000014617	rad54l	99	82.482	ENSNGAG00000024213	Rad54l	99	80.376	Nannospalax_galili
ENSLBEG00000014617	rad54l	99	82.336	ENSNLEG00000016548	RAD54L	99	80.511	Nomascus_leucogenys
ENSLBEG00000014617	rad54l	97	79.285	ENSMEUG00000006793	RAD54L	99	79.285	Notamacropus_eugenii
ENSLBEG00000014617	rad54l	90	81.754	ENSOPRG00000016016	RAD54L	90	81.754	Ochotona_princeps
ENSLBEG00000014617	rad54l	99	82.628	ENSODEG00000008519	RAD54L	99	81.048	Octodon_degus
ENSLBEG00000014617	rad54l	97	90.313	ENSONIG00000007659	rad54l	99	88.179	Oreochromis_niloticus
ENSLBEG00000014617	rad54l	99	82.336	ENSOCUG00000005229	RAD54L	99	79.839	Oryctolagus_cuniculus
ENSLBEG00000014617	rad54l	97	89.583	ENSORLG00000002958	rad54l	99	86.296	Oryzias_latipes
ENSLBEG00000014617	rad54l	97	89.732	ENSORLG00020006554	rad54l	99	89.732	Oryzias_latipes_hni
ENSLBEG00000014617	rad54l	97	89.732	ENSORLG00015002907	rad54l	99	86.992	Oryzias_latipes_hsok
ENSLBEG00000014617	rad54l	97	90.030	ENSOMEG00000007770	rad54l	99	87.246	Oryzias_melastigma
ENSLBEG00000014617	rad54l	99	82.216	ENSOARG00000002264	RAD54L	99	80.161	Ovis_aries
ENSLBEG00000014617	rad54l	99	82.336	ENSPPAG00000031222	RAD54L	99	80.645	Pan_paniscus
ENSLBEG00000014617	rad54l	99	81.314	ENSPPRG00000010317	RAD54L	99	78.898	Panthera_pardus
ENSLBEG00000014617	rad54l	99	81.314	ENSPTIG00000012200	RAD54L	99	78.898	Panthera_tigris_altaica
ENSLBEG00000014617	rad54l	99	82.336	ENSPTRG00000000689	RAD54L	99	80.645	Pan_troglodytes
ENSLBEG00000014617	rad54l	99	82.336	ENSPANG00000016295	RAD54L	99	80.780	Papio_anubis
ENSLBEG00000014617	rad54l	97	82.861	ENSPKIG00000016172	rad54l	99	79.404	Paramormyrops_kingsleyae
ENSLBEG00000014617	rad54l	97	84.673	ENSPSIG00000003258	RAD54L	99	81.831	Pelodiscus_sinensis
ENSLBEG00000014617	rad54l	99	84.211	ENSPMGG00000016335	rad54l	99	81.732	Periophthalmus_magnuspinnatus
ENSLBEG00000014617	rad54l	99	82.044	ENSPEMG00000011422	Rad54l	99	80.593	Peromyscus_maniculatus_bairdii
ENSLBEG00000014617	rad54l	97	73.412	ENSPMAG00000007719	rad54l	99	71.294	Petromyzon_marinus
ENSLBEG00000014617	rad54l	97	83.185	ENSPCIG00000029032	RAD54L	99	80.567	Phascolarctos_cinereus
ENSLBEG00000014617	rad54l	88	90.148	ENSPFOG00000013732	rad54l	100	89.151	Poecilia_formosa
ENSLBEG00000014617	rad54l	88	87.034	ENSPLAG00000023416	rad54l	100	87.034	Poecilia_latipinna
ENSLBEG00000014617	rad54l	88	90.148	ENSPMEG00000008299	rad54l	100	86.795	Poecilia_mexicana
ENSLBEG00000014617	rad54l	97	89.732	ENSPREG00000019955	rad54l	99	86.567	Poecilia_reticulata
ENSLBEG00000014617	rad54l	99	69.096	ENSPPYG00000001398	RAD54L	99	68.054	Pongo_abelii
ENSLBEG00000014617	rad54l	79	80.882	ENSPCAG00000005323	RAD54L	79	80.882	Procavia_capensis
ENSLBEG00000014617	rad54l	99	81.898	ENSPCOG00000015423	RAD54L	99	80.376	Propithecus_coquereli
ENSLBEG00000014617	rad54l	97	88.807	ENSPNYG00000002942	rad54l	94	88.807	Pundamilia_nyererei
ENSLBEG00000014617	rad54l	97	89.286	ENSPNAG00000012483	rad54l	99	86.856	Pygocentrus_nattereri
ENSLBEG00000014617	rad54l	99	81.898	ENSRNOG00000013148	Rad54l	99	80.242	Rattus_norvegicus
ENSLBEG00000014617	rad54l	99	82.336	ENSRBIG00000043495	RAD54L	99	80.645	Rhinopithecus_bieti
ENSLBEG00000014617	rad54l	99	82.336	ENSRROG00000020844	RAD54L	99	80.780	Rhinopithecus_roxellana
ENSLBEG00000014617	rad54l	86	49.689	YGL163C	RAD54	71	50.000	Saccharomyces_cerevisiae
ENSLBEG00000014617	rad54l	99	82.482	ENSSBOG00000024672	RAD54L	99	81.048	Saimiri_boliviensis_boliviensis
ENSLBEG00000014617	rad54l	97	82.938	ENSSHAG00000000110	RAD54L	99	80.485	Sarcophilus_harrisii
ENSLBEG00000014617	rad54l	99	92.130	ENSSDUG00000019147	rad54l	99	92.130	Seriola_dumerili
ENSLBEG00000014617	rad54l	99	92.402	ENSSLDG00000012330	rad54l	99	92.402	Seriola_lalandi_dorsalis
ENSLBEG00000014617	rad54l	80	86.076	ENSSARG00000006689	RAD54L	100	79.133	Sorex_araneus
ENSLBEG00000014617	rad54l	99	91.859	ENSSPAG00000011016	rad54l	99	91.859	Stegastes_partitus
ENSLBEG00000014617	rad54l	99	82.190	ENSSSCG00000003905	RAD54L	99	80.108	Sus_scrofa
ENSLBEG00000014617	rad54l	97	84.226	ENSTGUG00000008233	RAD54L	99	81.377	Taeniopygia_guttata
ENSLBEG00000014617	rad54l	97	90.356	ENSTRUG00000008410	rad54l	95	90.356	Takifugu_rubripes
ENSLBEG00000014617	rad54l	97	86.458	ENSTNIG00000004716	rad54l	99	82.745	Tetraodon_nigroviridis
ENSLBEG00000014617	rad54l	97	79.674	ENSTTRG00000006315	RAD54L	99	74.194	Tursiops_truncatus
ENSLBEG00000014617	rad54l	99	81.606	ENSUAMG00000011824	RAD54L	99	79.161	Ursus_americanus
ENSLBEG00000014617	rad54l	99	80.292	ENSUMAG00000023603	RAD54L	99	78.078	Ursus_maritimus
ENSLBEG00000014617	rad54l	99	81.460	ENSVVUG00000007201	RAD54L	99	79.301	Vulpes_vulpes
ENSLBEG00000014617	rad54l	97	76.889	ENSXETG00000004369	rad54l	99	76.404	Xenopus_tropicalis
ENSLBEG00000014617	rad54l	50	89.535	ENSXCOG00000016028	rad54l	83	86.508	Xiphophorus_couchianus