EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000014659 (Gene tree)
Gene ID: 110002486
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 27495 bases
Position: chrFKLU01000968.1:22450-49944
Accession: 110002486
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000019108	Fox-1_C	PF12414.8	6.7e-43	1	1
ENSLBEP00000019130	Fox-1_C	PF12414.8	7.3e-43	1	1
ENSLBEP00000019162	Fox-1_C	PF12414.8	1.3e-25	1	2
ENSLBEP00000019162	Fox-1_C	PF12414.8	1.3e-25	2	2
ENSLBEP00000019162	RRM_1	PF00076.22	1.7e-17	1	1
ENSLBEP00000019108	RRM_1	PF00076.22	2.4e-17	1	1
ENSLBEP00000019130	RRM_1	PF00076.22	3.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000020139	-	4960	-	ENSLBEP00000019108	359 (aa)	-	-
ENSLBET00000020163	-	1485	XM_020658089	ENSLBEP00000019130	378 (aa)	XP_020513745	UPI0009B3072F
ENSLBET00000020197	-	1161	-	ENSLBEP00000019162	386 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000014659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000014659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000014659	rbfox1	50	45.339	ENSLBEG00000026187	rbfox2	81	61.538
ENSLBEG00000014659	rbfox1	82	58.065	ENSLBEG00000017089	rbfox1l	77	59.122
ENSLBEG00000014659	rbfox1	97	67.045	ENSLBEG00000004030	rbfox3b	99	64.742
ENSLBEG00000014659	rbfox1	96	68.406	ENSLBEG00000022508	-	89	67.733
ENSLBEG00000014659	rbfox1	50	46.117	ENSLBEG00000028310	-	56	47.753

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000014659	rbfox1	97	78.533	ENSG00000078328	RBFOX1	95	78.261	Homo_sapiens
ENSLBEG00000014659	rbfox1	98	94.580	ENSAPOG00000003197	rbfox1	95	94.070	Acanthochromis_polyacanthus
ENSLBEG00000014659	rbfox1	65	70.213	ENSAMEG00000008605	RBFOX1	88	73.246	Ailuropoda_melanoleuca
ENSLBEG00000014659	rbfox1	67	75.185	ENSACIG00000005478	rbfox1	68	75.465	Amphilophus_citrinellus
ENSLBEG00000014659	rbfox1	79	91.873	ENSAOCG00000008283	rbfox1	97	91.873	Amphiprion_ocellaris
ENSLBEG00000014659	rbfox1	95	78.415	ENSAPEG00000010636	rbfox1	100	78.962	Amphiprion_percula
ENSLBEG00000014659	rbfox1	79	89.825	ENSATEG00000007513	rbfox1	97	89.825	Anabas_testudineus
ENSLBEG00000014659	rbfox1	99	72.772	ENSAPLG00000013263	RBFOX1	99	73.267	Anas_platyrhynchos
ENSLBEG00000014659	rbfox1	97	72.222	ENSACAG00000004013	RBFOX1	99	70.416	Anolis_carolinensis
ENSLBEG00000014659	rbfox1	97	79.076	ENSANAG00000029527	RBFOX1	98	76.640	Aotus_nancymaae
ENSLBEG00000014659	rbfox1	66	73.840	ENSAMXG00000002431	rbfox1	71	73.200	Astyanax_mexicanus
ENSLBEG00000014659	rbfox1	98	72.544	ENSBTAG00000007210	RBFOX1	97	73.048	Bos_taurus
ENSLBEG00000014659	rbfox1	99	75.907	ENSCJAG00000017351	RBFOX1	98	75.907	Callithrix_jacchus
ENSLBEG00000014659	rbfox1	98	72.431	ENSCAFG00000019082	RBFOX1	94	72.932	Canis_familiaris
ENSLBEG00000014659	rbfox1	71	69.675	ENSCAFG00020024881	RBFOX1	79	67.698	Canis_lupus_dingo
ENSLBEG00000014659	rbfox1	98	72.040	ENSCHIG00000023549	RBFOX1	97	72.544	Capra_hircus
ENSLBEG00000014659	rbfox1	97	78.747	ENSTSYG00000005334	RBFOX1	97	78.747	Carlito_syrichta
ENSLBEG00000014659	rbfox1	98	73.232	ENSCAPG00000017669	RBFOX1	100	73.485	Cavia_aperea
ENSLBEG00000014659	rbfox1	99	73.201	ENSCPOG00000011314	RBFOX1	99	73.485	Cavia_porcellus
ENSLBEG00000014659	rbfox1	97	79.076	ENSCCAG00000023031	RBFOX1	93	79.076	Cebus_capucinus
ENSLBEG00000014659	rbfox1	97	78.533	ENSCATG00000033816	RBFOX1	93	78.533	Cercocebus_atys
ENSLBEG00000014659	rbfox1	99	72.886	ENSCLAG00000012761	RBFOX1	99	73.134	Chinchilla_lanigera
ENSLBEG00000014659	rbfox1	91	69.602	ENSCSAG00000008739	RBFOX1	89	69.602	Chlorocebus_sabaeus
ENSLBEG00000014659	rbfox1	71	90.196	ENSCHOG00000012843	RBFOX1	63	90.769	Choloepus_hoffmanni
ENSLBEG00000014659	rbfox1	97	79.620	ENSCPBG00000026626	RBFOX1	97	74.559	Chrysemys_picta_bellii
ENSLBEG00000014659	rbfox1	97	78.533	ENSCANG00000033125	RBFOX1	93	78.533	Colobus_angolensis_palliatus
ENSLBEG00000014659	rbfox1	99	72.457	ENSCGRG00001013729	Rbfox1	99	72.705	Cricetulus_griseus_chok1gshd
ENSLBEG00000014659	rbfox1	99	72.457	ENSCGRG00000003272	Rbfox1	99	72.705	Cricetulus_griseus_crigri
ENSLBEG00000014659	rbfox1	94	83.799	ENSCSEG00000008840	rbfox1	97	83.520	Cynoglossus_semilaevis
ENSLBEG00000014659	rbfox1	98	80.914	ENSDARG00000014746	rbfox1	100	78.673	Danio_rerio
ENSLBEG00000014659	rbfox1	98	73.618	ENSDNOG00000043612	RBFOX1	94	73.869	Dasypus_novemcinctus
ENSLBEG00000014659	rbfox1	98	72.980	ENSDORG00000010024	Rbfox1	97	73.232	Dipodomys_ordii
ENSLBEG00000014659	rbfox1	98	61.558	ENSETEG00000003771	RBFOX1	94	61.809	Echinops_telfairi
ENSLBEG00000014659	rbfox1	98	73.048	ENSEASG00005011599	RBFOX1	97	73.300	Equus_asinus_asinus
ENSLBEG00000014659	rbfox1	98	72.796	ENSECAG00000012667	RBFOX1	91	72.280	Equus_caballus
ENSLBEG00000014659	rbfox1	100	56.995	ENSELUG00000013096	rbfox1	66	73.991	Esox_lucius
ENSLBEG00000014659	rbfox1	98	78.378	ENSFCAG00000025322	RBFOX1	86	78.378	Felis_catus
ENSLBEG00000014659	rbfox1	87	71.554	ENSFALG00000004027	RBFOX1	99	69.617	Ficedula_albicollis
ENSLBEG00000014659	rbfox1	99	72.953	ENSFDAG00000007388	RBFOX1	99	73.201	Fukomys_damarensis
ENSLBEG00000014659	rbfox1	98	73.804	ENSGALG00000034325	RBFOX1	93	74.307	Gallus_gallus
ENSLBEG00000014659	rbfox1	97	77.929	ENSGAGG00000023681	RBFOX1	100	75.000	Gopherus_agassizii
ENSLBEG00000014659	rbfox1	97	78.533	ENSGGOG00000016871	-	98	76.115	Gorilla_gorilla
ENSLBEG00000014659	rbfox1	99	72.953	ENSHGLG00000016944	RBFOX1	99	73.201	Heterocephalus_glaber_female
ENSLBEG00000014659	rbfox1	99	72.953	ENSHGLG00100003272	RBFOX1	99	73.201	Heterocephalus_glaber_male
ENSLBEG00000014659	rbfox1	91	82.831	ENSHCOG00000016419	rbfox1	91	82.282	Hippocampus_comes
ENSLBEG00000014659	rbfox1	98	77.454	ENSIPUG00000015215	rbfox1	97	79.437	Ictalurus_punctatus
ENSLBEG00000014659	rbfox1	99	73.449	ENSSTOG00000000322	RBFOX1	99	73.697	Ictidomys_tridecemlineatus
ENSLBEG00000014659	rbfox1	99	72.705	ENSJJAG00000002575	Rbfox1	100	71.814	Jaculus_jaculus
ENSLBEG00000014659	rbfox1	98	73.815	ENSLOCG00000006675	rbfox1	99	74.065	Lepisosteus_oculatus
ENSLBEG00000014659	rbfox1	75	77.419	ENSLAFG00000011480	RBFOX1	100	78.065	Loxodonta_africana
ENSLBEG00000014659	rbfox1	97	78.533	ENSMFAG00000036447	RBFOX1	98	75.321	Macaca_fascicularis
ENSLBEG00000014659	rbfox1	97	78.533	ENSMMUG00000003458	RBFOX1	93	78.533	Macaca_mulatta
ENSLBEG00000014659	rbfox1	98	71.930	ENSMNEG00000032034	RBFOX1	94	72.431	Macaca_nemestrina
ENSLBEG00000014659	rbfox1	97	78.533	ENSMLEG00000015382	RBFOX1	93	78.533	Mandrillus_leucophaeus
ENSLBEG00000014659	rbfox1	93	88.669	ENSMAMG00000003142	rbfox1	97	88.169	Mastacembelus_armatus
ENSLBEG00000014659	rbfox1	74	72.222	ENSMGAG00000008606	RBFOX1	96	72.222	Meleagris_gallopavo
ENSLBEG00000014659	rbfox1	99	43.041	ENSMAUG00000020570	Rbfox1	99	43.041	Mesocricetus_auratus
ENSLBEG00000014659	rbfox1	97	78.804	ENSMICG00000034286	RBFOX1	93	78.804	Microcebus_murinus
ENSLBEG00000014659	rbfox1	99	72.457	ENSMOCG00000020932	Rbfox1	99	73.077	Microtus_ochrogaster
ENSLBEG00000014659	rbfox1	91	82.317	ENSMMOG00000009716	rbfox1	86	83.077	Mola_mola
ENSLBEG00000014659	rbfox1	86	70.536	ENSMODG00000005826	RBFOX1	90	70.536	Monodelphis_domestica
ENSLBEG00000014659	rbfox1	99	86.034	ENSMALG00000003337	rbfox1	95	86.413	Monopterus_albus
ENSLBEG00000014659	rbfox1	99	72.457	MGP_CAROLIEiJ_G0020427	Rbfox1	99	72.705	Mus_caroli
ENSLBEG00000014659	rbfox1	99	72.705	ENSMUSG00000008658	Rbfox1	99	80.303	Mus_musculus
ENSLBEG00000014659	rbfox1	99	72.457	MGP_PahariEiJ_G0016135	Rbfox1	99	72.705	Mus_pahari
ENSLBEG00000014659	rbfox1	99	72.208	MGP_SPRETEiJ_G0021321	Rbfox1	99	72.705	Mus_spretus
ENSLBEG00000014659	rbfox1	90	69.341	ENSMPUG00000014822	RBFOX1	84	69.341	Mustela_putorius_furo
ENSLBEG00000014659	rbfox1	71	81.633	ENSMLUG00000015896	RBFOX1	100	77.994	Myotis_lucifugus
ENSLBEG00000014659	rbfox1	98	72.727	ENSNGAG00000023276	Rbfox1	100	72.980	Nannospalax_galili
ENSLBEG00000014659	rbfox1	98	69.036	ENSNBRG00000011084	rbfox1	94	66.423	Neolamprologus_brichardi
ENSLBEG00000014659	rbfox1	97	78.261	ENSNLEG00000010017	-	93	78.261	Nomascus_leucogenys
ENSLBEG00000014659	rbfox1	80	93.846	ENSMEUG00000012525	RBFOX1	72	93.846	Notamacropus_eugenii
ENSLBEG00000014659	rbfox1	69	97.500	ENSOPRG00000006199	-	74	73.894	Ochotona_princeps
ENSLBEG00000014659	rbfox1	99	73.201	ENSODEG00000013166	RBFOX1	99	73.449	Octodon_degus
ENSLBEG00000014659	rbfox1	91	69.602	ENSOANG00000002379	RBFOX1	89	69.602	Ornithorhynchus_anatinus
ENSLBEG00000014659	rbfox1	65	71.489	ENSOCUG00000001205	-	99	73.478	Oryctolagus_cuniculus
ENSLBEG00000014659	rbfox1	99	72.569	ENSOGAG00000025535	RBFOX1	99	72.818	Otolemur_garnettii
ENSLBEG00000014659	rbfox1	65	60.426	ENSOARG00000005135	RBFOX1	88	64.069	Ovis_aries
ENSLBEG00000014659	rbfox1	97	78.474	ENSPPAG00000036238	-	97	78.474	Pan_paniscus
ENSLBEG00000014659	rbfox1	97	78.804	ENSPPRG00000006546	RBFOX1	93	78.804	Panthera_pardus
ENSLBEG00000014659	rbfox1	98	66.844	ENSPTIG00000021154	RBFOX1	99	66.844	Panthera_tigris_altaica
ENSLBEG00000014659	rbfox1	97	78.533	ENSPTRG00000007744	RBFOX1	98	76.115	Pan_troglodytes
ENSLBEG00000014659	rbfox1	97	78.533	ENSPANG00000026500	RBFOX1	93	78.533	Papio_anubis
ENSLBEG00000014659	rbfox1	99	78.342	ENSPKIG00000009667	-	96	79.558	Paramormyrops_kingsleyae
ENSLBEG00000014659	rbfox1	79	76.491	ENSPKIG00000019353	rbfox1	87	75.789	Paramormyrops_kingsleyae
ENSLBEG00000014659	rbfox1	98	74.242	ENSPSIG00000006523	RBFOX1	97	74.747	Pelodiscus_sinensis
ENSLBEG00000014659	rbfox1	99	72.457	ENSPEMG00000017607	Rbfox1	99	72.705	Peromyscus_maniculatus_bairdii
ENSLBEG00000014659	rbfox1	70	79.649	ENSPCIG00000026887	RBFOX1	100	82.105	Phascolarctos_cinereus
ENSLBEG00000014659	rbfox1	90	69.628	ENSPPYG00000007079	-	84	69.628	Pongo_abelii
ENSLBEG00000014659	rbfox1	95	65.217	ENSPCAG00000002630	RBFOX1	93	65.738	Procavia_capensis
ENSLBEG00000014659	rbfox1	97	79.076	ENSPCOG00000025687	RBFOX1	93	79.076	Propithecus_coquereli
ENSLBEG00000014659	rbfox1	98	68.250	ENSPVAG00000013467	RBFOX1	94	69.250	Pteropus_vampyrus
ENSLBEG00000014659	rbfox1	93	77.688	ENSPNAG00000023109	rbfox1	97	76.471	Pygocentrus_nattereri
ENSLBEG00000014659	rbfox1	98	72.040	ENSRNOG00000002827	Rbfox1	94	72.111	Rattus_norvegicus
ENSLBEG00000014659	rbfox1	97	78.474	ENSRBIG00000044478	RBFOX1	97	78.474	Rhinopithecus_bieti
ENSLBEG00000014659	rbfox1	97	78.533	ENSRROG00000044411	RBFOX1	93	78.533	Rhinopithecus_roxellana
ENSLBEG00000014659	rbfox1	97	79.076	ENSSBOG00000033726	RBFOX1	98	76.903	Saimiri_boliviensis_boliviensis
ENSLBEG00000014659	rbfox1	97	73.724	ENSSHAG00000009257	RBFOX1	99	72.549	Sarcophilus_harrisii
ENSLBEG00000014659	rbfox1	96	69.577	ENSSFOG00015009955	-	84	71.137	Scleropages_formosus
ENSLBEG00000014659	rbfox1	98	70.027	ENSSFOG00015023675	rbfox1	97	70.027	Scleropages_formosus
ENSLBEG00000014659	rbfox1	100	90.278	ENSSMAG00000015505	rbfox1	99	89.444	Scophthalmus_maximus
ENSLBEG00000014659	rbfox1	98	88.076	ENSSDUG00000016413	rbfox1	99	87.268	Seriola_dumerili
ENSLBEG00000014659	rbfox1	93	83.832	ENSSLDG00000009353	rbfox1	95	92.027	Seriola_lalandi_dorsalis
ENSLBEG00000014659	rbfox1	92	74.096	ENSSPUG00000009732	RBFOX1	88	74.096	Sphenodon_punctatus
ENSLBEG00000014659	rbfox1	97	93.151	ENSSPAG00000009723	rbfox1	97	92.643	Stegastes_partitus
ENSLBEG00000014659	rbfox1	97	73.028	ENSSSCG00000007917	RBFOX1	91	73.028	Sus_scrofa
ENSLBEG00000014659	rbfox1	98	74.495	ENSTGUG00000004562	RBFOX1	99	74.747	Taeniopygia_guttata
ENSLBEG00000014659	rbfox1	98	91.057	ENSTRUG00000020940	rbfox1	97	90.296	Takifugu_rubripes
ENSLBEG00000014659	rbfox1	67	65.854	ENSTNIG00000002567	rbfox1	100	68.293	Tetraodon_nigroviridis
ENSLBEG00000014659	rbfox1	59	86.861	ENSTBEG00000009169	-	54	86.861	Tupaia_belangeri
ENSLBEG00000014659	rbfox1	98	71.930	ENSTTRG00000005700	RBFOX1	94	72.431	Tursiops_truncatus
ENSLBEG00000014659	rbfox1	98	75.853	ENSUAMG00000024633	RBFOX1	99	75.853	Ursus_americanus
ENSLBEG00000014659	rbfox1	98	68.074	ENSUMAG00000003579	RBFOX1	99	68.074	Ursus_maritimus
ENSLBEG00000014659	rbfox1	75	76.774	ENSVPAG00000001284	RBFOX1	74	77.419	Vicugna_pacos
ENSLBEG00000014659	rbfox1	98	78.649	ENSVVUG00000017311	RBFOX1	100	64.677	Vulpes_vulpes