EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000014796 (Gene tree)
Gene ID: 110002963
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 9291 bases
Position: chrFKLU01001086.1:57637-66927
Accession: 110002963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000019233	zf-C2H2	PF00096.26	3.7e-12	1	3
ENSLBEP00000019233	zf-C2H2	PF00096.26	3.7e-12	2	3
ENSLBEP00000019233	zf-C2H2	PF00096.26	3.7e-12	3	3
ENSLBEP00000019233	zf-met	PF12874.7	5.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000020274	-	6360	XM_020658650	ENSLBEP00000019233	575 (aa)	XP_020514306	UPI0009B44300

Gene Model

Click here to download ENSLBEG00000014796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000014796's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000014796	zbtb18	53	33.071	ENSLBEG00000010933	-	72	33.071
ENSLBEG00000014796	zbtb18	55	37.008	ENSLBEG00000013821	hic2	77	37.008
ENSLBEG00000014796	zbtb18	51	34.559	ENSLBEG00000019067	zbtb47b	57	34.848

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000014796	zbtb18	100	94.473	ENSAPOG00000005168	zbtb18	100	94.473	Acanthochromis_polyacanthus
ENSLBEG00000014796	zbtb18	99	84.912	ENSACIG00000008655	zbtb18	99	84.912	Amphilophus_citrinellus
ENSLBEG00000014796	zbtb18	100	94.473	ENSAOCG00000014105	zbtb18	100	94.473	Amphiprion_ocellaris
ENSLBEG00000014796	zbtb18	100	93.814	ENSAPEG00000003817	zbtb18	79	93.986	Amphiprion_percula
ENSLBEG00000014796	zbtb18	100	93.750	ENSATEG00000010192	zbtb18	100	93.750	Anabas_testudineus
ENSLBEG00000014796	zbtb18	99	94.396	ENSACLG00000022978	zbtb18	98	94.396	Astatotilapia_calliptera
ENSLBEG00000014796	zbtb18	99	72.666	ENSAMXG00000042119	zbtb18	99	72.666	Astyanax_mexicanus
ENSLBEG00000014796	zbtb18	100	91.667	ENSCSEG00000003083	zbtb18	100	91.667	Cynoglossus_semilaevis
ENSLBEG00000014796	zbtb18	100	92.361	ENSCVAG00000016785	zbtb18	100	92.361	Cyprinodon_variegatus
ENSLBEG00000014796	zbtb18	98	71.678	ENSDARG00000028228	zbtb18	100	73.776	Danio_rerio
ENSLBEG00000014796	zbtb18	100	75.215	ENSELUG00000013471	zbtb18	100	75.215	Esox_lucius
ENSLBEG00000014796	zbtb18	99	91.638	ENSFHEG00000020005	zbtb18	99	91.638	Fundulus_heteroclitus
ENSLBEG00000014796	zbtb18	57	90.511	ENSGMOG00000018718	zbtb18	60	90.256	Gadus_morhua
ENSLBEG00000014796	zbtb18	99	89.895	ENSGAFG00000000619	zbtb18	99	89.895	Gambusia_affinis
ENSLBEG00000014796	zbtb18	100	89.410	ENSGACG00000010518	zbtb18	97	90.104	Gasterosteus_aculeatus
ENSLBEG00000014796	zbtb18	100	94.444	ENSHBUG00000013654	zbtb18	100	94.444	Haplochromis_burtoni
ENSLBEG00000014796	zbtb18	55	88.000	ENSHCOG00000002345	zbtb18	95	88.000	Hippocampus_comes
ENSLBEG00000014796	zbtb18	99	66.724	ENSIPUG00000008912	zbtb18	99	66.724	Ictalurus_punctatus
ENSLBEG00000014796	zbtb18	100	93.056	ENSKMAG00000002780	zbtb18	100	93.056	Kryptolebias_marmoratus
ENSLBEG00000014796	zbtb18	84	60.321	ENSMFAG00000033326	ZBTB18	99	60.321	Macaca_fascicularis
ENSLBEG00000014796	zbtb18	84	60.442	ENSMMUG00000015664	ZBTB18	100	60.243	Macaca_mulatta
ENSLBEG00000014796	zbtb18	100	95.139	ENSMAMG00000021720	zbtb18	100	95.139	Mastacembelus_armatus
ENSLBEG00000014796	zbtb18	100	94.444	ENSMZEG00005027394	zbtb18	100	94.444	Maylandia_zebra
ENSLBEG00000014796	zbtb18	94	51.756	ENSMGAG00000015389	-	100	51.756	Meleagris_gallopavo
ENSLBEG00000014796	zbtb18	98	86.396	ENSMMOG00000007888	zbtb18	99	86.396	Mola_mola
ENSLBEG00000014796	zbtb18	100	93.403	ENSMALG00000000725	zbtb18	100	93.403	Monopterus_albus
ENSLBEG00000014796	zbtb18	98	94.867	ENSNBRG00000013796	zbtb18	100	94.867	Neolamprologus_brichardi
ENSLBEG00000014796	zbtb18	100	94.444	ENSONIG00000000862	zbtb18	100	94.444	Oreochromis_niloticus
ENSLBEG00000014796	zbtb18	99	92.644	ENSORLG00000027425	zbtb18	98	92.644	Oryzias_latipes
ENSLBEG00000014796	zbtb18	99	92.820	ENSORLG00020011988	zbtb18	98	92.820	Oryzias_latipes_hni
ENSLBEG00000014796	zbtb18	99	92.670	ENSORLG00015017457	zbtb18	98	92.644	Oryzias_latipes_hsok
ENSLBEG00000014796	zbtb18	99	92.294	ENSOMEG00000011249	zbtb18	98	92.294	Oryzias_melastigma
ENSLBEG00000014796	zbtb18	98	54.514	ENSPKIG00000008787	-	100	54.514	Paramormyrops_kingsleyae
ENSLBEG00000014796	zbtb18	99	70.415	ENSPKIG00000021964	zbtb18	96	71.404	Paramormyrops_kingsleyae
ENSLBEG00000014796	zbtb18	98	81.770	ENSPMGG00000008020	zbtb18	100	81.770	Periophthalmus_magnuspinnatus
ENSLBEG00000014796	zbtb18	98	89.753	ENSPFOG00000022080	zbtb18	100	89.753	Poecilia_formosa
ENSLBEG00000014796	zbtb18	98	84.629	ENSPLAG00000020960	zbtb18	100	84.629	Poecilia_latipinna
ENSLBEG00000014796	zbtb18	98	84.629	ENSPLAG00000011299	-	100	84.629	Poecilia_latipinna
ENSLBEG00000014796	zbtb18	98	90.636	ENSPMEG00000007554	zbtb18	100	90.636	Poecilia_mexicana
ENSLBEG00000014796	zbtb18	99	90.941	ENSPREG00000008576	zbtb18	99	90.941	Poecilia_reticulata
ENSLBEG00000014796	zbtb18	100	94.444	ENSPNYG00000001530	zbtb18	100	94.444	Pundamilia_nyererei
ENSLBEG00000014796	zbtb18	88	69.011	ENSPNAG00000014066	zbtb18	86	70.450	Pygocentrus_nattereri
ENSLBEG00000014796	zbtb18	98	92.212	ENSSMAG00000018041	zbtb18	100	92.212	Scophthalmus_maximus
ENSLBEG00000014796	zbtb18	98	95.398	ENSSDUG00000018660	zbtb18	100	95.398	Seriola_dumerili
ENSLBEG00000014796	zbtb18	98	95.398	ENSSLDG00000022573	zbtb18	100	95.398	Seriola_lalandi_dorsalis
ENSLBEG00000014796	zbtb18	94	50.642	ENSSPUG00000010554	-	100	51.193	Sphenodon_punctatus
ENSLBEG00000014796	zbtb18	100	94.792	ENSSPAG00000002691	zbtb18	100	94.792	Stegastes_partitus
ENSLBEG00000014796	zbtb18	98	92.389	ENSTRUG00000020604	zbtb18	100	92.389	Takifugu_rubripes
ENSLBEG00000014796	zbtb18	99	84.091	ENSTNIG00000000430	zbtb18	99	84.615	Tetraodon_nigroviridis
ENSLBEG00000014796	zbtb18	98	85.159	ENSXCOG00000013308	zbtb18	100	85.866	Xiphophorus_couchianus
ENSLBEG00000014796	zbtb18	99	81.930	ENSXMAG00000018241	zbtb18	99	81.930	Xiphophorus_maculatus