EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000014925 (Gene tree)
Gene ID: 109987231
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5517 bases
Position: chrFKLU01000112.1:1095324-1100840
Accession: 109987231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000019446	RNA_pol_A_bac	PF01000.26	2.6e-30	1	1
ENSLBEP00000019463	RNA_pol_A_bac	PF01000.26	2.6e-30	1	1
ENSLBEP00000019446	RNA_pol_L	PF01193.24	3.6e-24	1	1
ENSLBEP00000019463	RNA_pol_L	PF01193.24	3.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000020518	-	2046	-	ENSLBEP00000019463	351 (aa)	-	UPI0009B3B081
ENSLBET00000020500	-	2228	XM_020638253	ENSLBEP00000019446	351 (aa)	XP_020493909	UPI0009B3B081

Gene Model

Click here to download ENSLBEG00000014925's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000014925's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000014925	polr1c	100	71.510	ENSG00000171453	POLR1C	100	72.656	Homo_sapiens
ENSLBEG00000014925	polr1c	100	89.744	ENSAPOG00000024356	polr1c	100	89.744	Acanthochromis_polyacanthus
ENSLBEG00000014925	polr1c	99	70.774	ENSAMEG00000012205	POLR1C	99	70.201	Ailuropoda_melanoleuca
ENSLBEG00000014925	polr1c	95	78.916	ENSACIG00000016268	polr1c	91	78.916	Amphilophus_citrinellus
ENSLBEG00000014925	polr1c	100	89.744	ENSAOCG00000011687	polr1c	97	89.744	Amphiprion_ocellaris
ENSLBEG00000014925	polr1c	100	90.598	ENSAPEG00000002433	polr1c	100	90.598	Amphiprion_percula
ENSLBEG00000014925	polr1c	99	91.954	ENSATEG00000005985	polr1c	99	91.954	Anabas_testudineus
ENSLBEG00000014925	polr1c	87	71.382	ENSAPLG00000002908	POLR1C	100	70.724	Anas_platyrhynchos
ENSLBEG00000014925	polr1c	90	71.746	ENSACAG00000009764	POLR1C	89	71.429	Anolis_carolinensis
ENSLBEG00000014925	polr1c	100	70.940	ENSANAG00000025805	POLR1C	99	70.370	Aotus_nancymaae
ENSLBEG00000014925	polr1c	100	90.598	ENSACLG00000006573	polr1c	100	90.598	Astatotilapia_calliptera
ENSLBEG00000014925	polr1c	57	30.653	ENSACLG00000004854	polr2c	80	30.151	Astatotilapia_calliptera
ENSLBEG00000014925	polr1c	100	83.191	ENSAMXG00000012062	polr1c	99	82.621	Astyanax_mexicanus
ENSLBEG00000014925	polr1c	100	72.080	ENSBTAG00000018969	POLR1C	100	71.795	Bos_taurus
ENSLBEG00000014925	polr1c	96	45.892	WBGene00019275	rpac-40	94	45.326	Caenorhabditis_elegans
ENSLBEG00000014925	polr1c	100	70.940	ENSCJAG00000005594	POLR1C	100	70.370	Callithrix_jacchus
ENSLBEG00000014925	polr1c	100	71.510	ENSCAFG00000001872	POLR1C	100	70.940	Canis_familiaris
ENSLBEG00000014925	polr1c	100	71.510	ENSCAFG00020012018	POLR1C	100	70.940	Canis_lupus_dingo
ENSLBEG00000014925	polr1c	100	72.080	ENSCHIG00000004352	POLR1C	100	71.510	Capra_hircus
ENSLBEG00000014925	polr1c	100	71.795	ENSTSYG00000011921	POLR1C	100	71.225	Carlito_syrichta
ENSLBEG00000014925	polr1c	86	72.937	ENSCAPG00000015364	POLR1C	88	72.277	Cavia_aperea
ENSLBEG00000014925	polr1c	100	72.365	ENSCPOG00000038098	POLR1C	100	71.795	Cavia_porcellus
ENSLBEG00000014925	polr1c	100	71.225	ENSCCAG00000020169	POLR1C	100	70.655	Cebus_capucinus
ENSLBEG00000014925	polr1c	100	71.510	ENSCATG00000044045	POLR1C	100	71.225	Cercocebus_atys
ENSLBEG00000014925	polr1c	100	72.650	ENSCLAG00000009266	POLR1C	100	72.080	Chinchilla_lanigera
ENSLBEG00000014925	polr1c	100	70.655	ENSCSAG00000011913	POLR1C	100	70.370	Chlorocebus_sabaeus
ENSLBEG00000014925	polr1c	60	67.925	ENSCHOG00000006601	POLR1C	100	67.925	Choloepus_hoffmanni
ENSLBEG00000014925	polr1c	99	74.212	ENSCPBG00000025203	POLR1C	99	73.639	Chrysemys_picta_bellii
ENSLBEG00000014925	polr1c	98	55.072	ENSCING00000003563	-	99	54.598	Ciona_intestinalis
ENSLBEG00000014925	polr1c	100	71.510	ENSCANG00000043167	POLR1C	100	70.940	Colobus_angolensis_palliatus
ENSLBEG00000014925	polr1c	100	70.655	ENSCGRG00001017533	Polr1c	100	70.085	Cricetulus_griseus_chok1gshd
ENSLBEG00000014925	polr1c	86	71.617	ENSCGRG00000013225	Polr1c	100	70.957	Cricetulus_griseus_crigri
ENSLBEG00000014925	polr1c	100	84.615	ENSCSEG00000018097	polr1c	100	83.761	Cynoglossus_semilaevis
ENSLBEG00000014925	polr1c	57	30.653	ENSCVAG00000017931	polr2c	76	30.653	Cyprinodon_variegatus
ENSLBEG00000014925	polr1c	60	90.566	ENSCVAG00000005684	polr1c	85	90.566	Cyprinodon_variegatus
ENSLBEG00000014925	polr1c	100	81.197	ENSDARG00000039400	polr1c	96	80.342	Danio_rerio
ENSLBEG00000014925	polr1c	100	72.080	ENSDNOG00000042693	POLR1C	100	71.510	Dasypus_novemcinctus
ENSLBEG00000014925	polr1c	100	73.219	ENSDORG00000000429	Polr1c	100	72.650	Dipodomys_ordii
ENSLBEG00000014925	polr1c	90	51.735	FBgn0031657	CG3756	93	51.104	Drosophila_melanogaster
ENSLBEG00000014925	polr1c	99	67.622	ENSETEG00000010807	POLR1C	99	67.335	Echinops_telfairi
ENSLBEG00000014925	polr1c	97	67.059	ENSEBUG00000013725	polr1c	97	66.471	Eptatretus_burgeri
ENSLBEG00000014925	polr1c	100	71.510	ENSEASG00005003338	POLR1C	100	70.940	Equus_asinus_asinus
ENSLBEG00000014925	polr1c	100	71.510	ENSECAG00000023516	POLR1C	98	70.940	Equus_caballus
ENSLBEG00000014925	polr1c	99	72.779	ENSEEUG00000005471	POLR1C	99	72.206	Erinaceus_europaeus
ENSLBEG00000014925	polr1c	100	83.191	ENSELUG00000013027	polr1c	100	82.621	Esox_lucius
ENSLBEG00000014925	polr1c	100	72.080	ENSFCAG00000009735	POLR1C	100	71.510	Felis_catus
ENSLBEG00000014925	polr1c	93	71.865	ENSFALG00000012111	POLR1C	100	71.254	Ficedula_albicollis
ENSLBEG00000014925	polr1c	100	71.795	ENSFDAG00000008428	POLR1C	100	71.225	Fukomys_damarensis
ENSLBEG00000014925	polr1c	100	73.219	ENSFHEG00000000262	polr1c	100	73.789	Fundulus_heteroclitus
ENSLBEG00000014925	polr1c	93	82.012	ENSGMOG00000013878	polr1c	100	81.402	Gadus_morhua
ENSLBEG00000014925	polr1c	100	71.795	ENSGALG00000010349	POLR1C	100	71.225	Gallus_gallus
ENSLBEG00000014925	polr1c	100	87.749	ENSGAFG00000010153	polr1c	100	87.749	Gambusia_affinis
ENSLBEG00000014925	polr1c	100	87.749	ENSGACG00000002453	polr1c	100	87.749	Gasterosteus_aculeatus
ENSLBEG00000014925	polr1c	99	73.699	ENSGAGG00000010640	POLR1C	99	73.121	Gopherus_agassizii
ENSLBEG00000014925	polr1c	100	71.510	ENSGGOG00000010903	POLR1C	100	70.940	Gorilla_gorilla
ENSLBEG00000014925	polr1c	57	30.653	ENSHBUG00000023040	polr2c	80	30.151	Haplochromis_burtoni
ENSLBEG00000014925	polr1c	100	80.912	ENSHBUG00000017816	polr1c	100	80.057	Haplochromis_burtoni
ENSLBEG00000014925	polr1c	100	71.510	ENSHGLG00000019441	POLR1C	100	70.940	Heterocephalus_glaber_female
ENSLBEG00000014925	polr1c	100	71.795	ENSHGLG00100005970	POLR1C	100	71.225	Heterocephalus_glaber_male
ENSLBEG00000014925	polr1c	99	83.095	ENSHCOG00000002179	polr1c	99	83.095	Hippocampus_comes
ENSLBEG00000014925	polr1c	99	82.421	ENSIPUG00000024464	polr1c	99	81.844	Ictalurus_punctatus
ENSLBEG00000014925	polr1c	100	71.795	ENSSTOG00000010631	POLR1C	100	71.225	Ictidomys_tridecemlineatus
ENSLBEG00000014925	polr1c	60	30.455	ENSSTOG00000015150	-	50	30.000	Ictidomys_tridecemlineatus
ENSLBEG00000014925	polr1c	100	71.795	ENSJJAG00000023110	Polr1c	100	71.225	Jaculus_jaculus
ENSLBEG00000014925	polr1c	100	86.895	ENSKMAG00000014305	polr1c	97	86.895	Kryptolebias_marmoratus
ENSLBEG00000014925	polr1c	93	58.006	ENSLACG00000012567	POLR1C	96	57.402	Latimeria_chalumnae
ENSLBEG00000014925	polr1c	100	79.202	ENSLOCG00000016710	polr1c	96	78.632	Lepisosteus_oculatus
ENSLBEG00000014925	polr1c	60	30.189	ENSLAFG00000027230	POLR2C	80	30.435	Loxodonta_africana
ENSLBEG00000014925	polr1c	87	72.787	ENSLAFG00000026248	POLR1C	100	72.131	Loxodonta_africana
ENSLBEG00000014925	polr1c	100	71.225	ENSMFAG00000046295	POLR1C	100	70.940	Macaca_fascicularis
ENSLBEG00000014925	polr1c	100	71.225	ENSMMUG00000015192	POLR1C	100	70.940	Macaca_mulatta
ENSLBEG00000014925	polr1c	100	71.225	ENSMNEG00000028073	POLR1C	100	70.940	Macaca_nemestrina
ENSLBEG00000014925	polr1c	100	71.225	ENSMLEG00000034818	POLR1C	100	70.940	Mandrillus_leucophaeus
ENSLBEG00000014925	polr1c	100	90.028	ENSMAMG00000008700	polr1c	100	90.028	Mastacembelus_armatus
ENSLBEG00000014925	polr1c	100	90.313	ENSMZEG00005018545	polr1c	100	90.313	Maylandia_zebra
ENSLBEG00000014925	polr1c	84	69.153	ENSMGAG00000011020	POLR1C	100	68.475	Meleagris_gallopavo
ENSLBEG00000014925	polr1c	100	71.225	ENSMAUG00000014329	Polr1c	100	70.655	Mesocricetus_auratus
ENSLBEG00000014925	polr1c	100	70.085	ENSMICG00000005027	POLR1C	100	69.516	Microcebus_murinus
ENSLBEG00000014925	polr1c	100	71.510	ENSMOCG00000017549	Polr1c	100	70.940	Microtus_ochrogaster
ENSLBEG00000014925	polr1c	100	72.934	ENSMMOG00000005380	polr1c	100	73.504	Mola_mola
ENSLBEG00000014925	polr1c	84	74.237	ENSMODG00000018964	POLR1C	100	73.898	Monodelphis_domestica
ENSLBEG00000014925	polr1c	100	75.499	ENSMALG00000011711	polr1c	100	75.783	Monopterus_albus
ENSLBEG00000014925	polr1c	100	62.678	MGP_CAROLIEiJ_G0021662	Polr1c	100	69.697	Mus_caroli
ENSLBEG00000014925	polr1c	100	71.510	ENSMUSG00000067148	Polr1c	99	72.816	Mus_musculus
ENSLBEG00000014925	polr1c	100	72.365	MGP_PahariEiJ_G0020654	Polr1c	99	73.786	Mus_pahari
ENSLBEG00000014925	polr1c	100	71.510	MGP_SPRETEiJ_G0022574	Polr1c	99	72.816	Mus_spretus
ENSLBEG00000014925	polr1c	100	71.510	ENSMPUG00000012916	POLR1C	91	70.940	Mustela_putorius_furo
ENSLBEG00000014925	polr1c	100	71.795	ENSMLUG00000017751	POLR1C	99	71.225	Myotis_lucifugus
ENSLBEG00000014925	polr1c	100	71.510	ENSNGAG00000023487	Polr1c	100	71.864	Nannospalax_galili
ENSLBEG00000014925	polr1c	100	90.313	ENSNBRG00000018742	polr1c	100	90.313	Neolamprologus_brichardi
ENSLBEG00000014925	polr1c	100	71.225	ENSNLEG00000004035	POLR1C	100	70.655	Nomascus_leucogenys
ENSLBEG00000014925	polr1c	100	62.393	ENSMEUG00000006778	POLR1C	100	62.108	Notamacropus_eugenii
ENSLBEG00000014925	polr1c	78	70.330	ENSOPRG00000000145	POLR1C	100	69.963	Ochotona_princeps
ENSLBEG00000014925	polr1c	62	68.950	ENSODEG00000017109	-	97	69.340	Octodon_degus
ENSLBEG00000014925	polr1c	100	72.365	ENSODEG00000015831	-	100	71.795	Octodon_degus
ENSLBEG00000014925	polr1c	100	90.598	ENSONIG00000013133	polr1c	98	90.598	Oreochromis_niloticus
ENSLBEG00000014925	polr1c	99	69.628	ENSOANG00000003043	POLR1C	99	69.054	Ornithorhynchus_anatinus
ENSLBEG00000014925	polr1c	100	70.370	ENSOCUG00000005504	POLR1C	99	69.801	Oryctolagus_cuniculus
ENSLBEG00000014925	polr1c	100	84.046	ENSORLG00000019743	polr1c	100	84.046	Oryzias_latipes
ENSLBEG00000014925	polr1c	76	68.613	ENSORLG00020005555	polr1c	81	68.116	Oryzias_latipes_hni
ENSLBEG00000014925	polr1c	100	84.330	ENSORLG00020006489	POLR1C	100	84.330	Oryzias_latipes_hni
ENSLBEG00000014925	polr1c	100	84.046	ENSORLG00015013322	polr1c	100	84.046	Oryzias_latipes_hsok
ENSLBEG00000014925	polr1c	100	84.330	ENSOMEG00000016527	polr1c	100	84.330	Oryzias_melastigma
ENSLBEG00000014925	polr1c	99	71.060	ENSOGAG00000016318	POLR1C	99	70.201	Otolemur_garnettii
ENSLBEG00000014925	polr1c	100	71.795	ENSOARG00000007503	POLR1C	100	71.510	Ovis_aries
ENSLBEG00000014925	polr1c	100	71.510	ENSPPAG00000043678	POLR1C	100	70.940	Pan_paniscus
ENSLBEG00000014925	polr1c	100	72.080	ENSPPRG00000009760	POLR1C	100	71.510	Panthera_pardus
ENSLBEG00000014925	polr1c	100	72.080	ENSPTIG00000014813	POLR1C	100	71.510	Panthera_tigris_altaica
ENSLBEG00000014925	polr1c	100	71.510	ENSPTRG00000018202	POLR1C	100	70.940	Pan_troglodytes
ENSLBEG00000014925	polr1c	100	71.510	ENSPANG00000009025	POLR1C	99	71.225	Papio_anubis
ENSLBEG00000014925	polr1c	100	81.481	ENSPKIG00000009858	polr1c	100	80.912	Paramormyrops_kingsleyae
ENSLBEG00000014925	polr1c	99	73.066	ENSPSIG00000012580	POLR1C	94	72.493	Pelodiscus_sinensis
ENSLBEG00000014925	polr1c	100	70.940	ENSPMGG00000012121	polr1c	100	71.510	Periophthalmus_magnuspinnatus
ENSLBEG00000014925	polr1c	59	30.769	ENSPMGG00000021249	polr2c	81	31.280	Periophthalmus_magnuspinnatus
ENSLBEG00000014925	polr1c	100	71.795	ENSPEMG00000006970	Polr1c	100	71.225	Peromyscus_maniculatus_bairdii
ENSLBEG00000014925	polr1c	99	69.714	ENSPMAG00000005560	polr1c	99	69.429	Petromyzon_marinus
ENSLBEG00000014925	polr1c	60	30.660	ENSPMAG00000004827	polr2c	88	30.189	Petromyzon_marinus
ENSLBEG00000014925	polr1c	100	72.650	ENSPCIG00000028137	POLR1C	98	72.365	Phascolarctos_cinereus
ENSLBEG00000014925	polr1c	100	88.319	ENSPFOG00000014357	polr1c	98	88.319	Poecilia_formosa
ENSLBEG00000014925	polr1c	100	88.319	ENSPFOG00000014342	POLR1C	100	88.319	Poecilia_formosa
ENSLBEG00000014925	polr1c	60	89.151	ENSPLAG00000004111	polr1c	88	89.151	Poecilia_latipinna
ENSLBEG00000014925	polr1c	100	88.319	ENSPMEG00000008420	polr1c	100	88.319	Poecilia_mexicana
ENSLBEG00000014925	polr1c	100	88.319	ENSPMEG00000011877	-	100	88.319	Poecilia_mexicana
ENSLBEG00000014925	polr1c	100	86.895	ENSPREG00000007985	polr1c	100	86.610	Poecilia_reticulata
ENSLBEG00000014925	polr1c	100	71.225	ENSPPYG00000016645	POLR1C	100	70.655	Pongo_abelii
ENSLBEG00000014925	polr1c	100	70.370	ENSPCOG00000024628	POLR1C	100	69.801	Propithecus_coquereli
ENSLBEG00000014925	polr1c	100	66.097	ENSPVAG00000005689	POLR1C	100	66.097	Pteropus_vampyrus
ENSLBEG00000014925	polr1c	100	90.313	ENSPNYG00000003620	polr1c	100	90.313	Pundamilia_nyererei
ENSLBEG00000014925	polr1c	100	82.906	ENSPNAG00000008443	polr1c	100	82.336	Pygocentrus_nattereri
ENSLBEG00000014925	polr1c	100	71.510	ENSRNOG00000019079	Polr1c	100	70.940	Rattus_norvegicus
ENSLBEG00000014925	polr1c	100	71.225	ENSRBIG00000007155	POLR1C	100	70.655	Rhinopithecus_bieti
ENSLBEG00000014925	polr1c	100	71.510	ENSRROG00000000257	POLR1C	100	70.940	Rhinopithecus_roxellana
ENSLBEG00000014925	polr1c	93	46.970	YPR110C	RPC40	98	47.273	Saccharomyces_cerevisiae
ENSLBEG00000014925	polr1c	100	71.225	ENSSBOG00000025735	POLR1C	99	70.513	Saimiri_boliviensis_boliviensis
ENSLBEG00000014925	polr1c	100	65.242	ENSSHAG00000014456	POLR1C	100	64.957	Sarcophilus_harrisii
ENSLBEG00000014925	polr1c	100	81.766	ENSSFOG00015019860	polr1c	100	81.197	Scleropages_formosus
ENSLBEG00000014925	polr1c	100	88.604	ENSSMAG00000018865	polr1c	100	87.464	Scophthalmus_maximus
ENSLBEG00000014925	polr1c	100	92.308	ENSSDUG00000015745	polr1c	91	92.308	Seriola_dumerili
ENSLBEG00000014925	polr1c	100	92.023	ENSSLDG00000018285	polr1c	91	92.023	Seriola_lalandi_dorsalis
ENSLBEG00000014925	polr1c	98	71.014	ENSSPUG00000011822	POLR1C	99	70.435	Sphenodon_punctatus
ENSLBEG00000014925	polr1c	100	90.883	ENSSPAG00000022369	polr1c	100	90.883	Stegastes_partitus
ENSLBEG00000014925	polr1c	100	71.510	ENSSSCG00000028007	POLR1C	99	70.940	Sus_scrofa
ENSLBEG00000014925	polr1c	96	72.024	ENSTGUG00000009159	POLR1C	99	71.429	Taeniopygia_guttata
ENSLBEG00000014925	polr1c	100	85.185	ENSTRUG00000006264	polr1c	100	85.185	Takifugu_rubripes
ENSLBEG00000014925	polr1c	51	70.787	ENSTBEG00000002254	POLR1C	100	70.787	Tupaia_belangeri
ENSLBEG00000014925	polr1c	76	69.663	ENSTTRG00000006344	POLR1C	76	68.914	Tursiops_truncatus
ENSLBEG00000014925	polr1c	100	71.510	ENSUAMG00000025602	POLR1C	100	70.940	Ursus_americanus
ENSLBEG00000014925	polr1c	100	71.510	ENSUMAG00000005938	POLR1C	100	70.940	Ursus_maritimus
ENSLBEG00000014925	polr1c	100	69.516	ENSVVUG00000028922	POLR1C	100	69.231	Vulpes_vulpes
ENSLBEG00000014925	polr1c	99	68.000	ENSXETG00000010882	polr1c	99	67.429	Xenopus_tropicalis
ENSLBEG00000014925	polr1c	100	86.895	ENSXCOG00000014185	polr1c	100	86.040	Xiphophorus_couchianus
ENSLBEG00000014925	polr1c	100	87.749	ENSXMAG00000015076	polr1c	100	87.749	Xiphophorus_maculatus