EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000015027 (Gene tree)
Gene ID: 109986238
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 4289 bases
Position: chrFKLU01000093.1:1018560-1022848
Accession: 109986238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000019585	dsrm	PF00035.26	3.6e-35	1	2
ENSLBEP00000019585	dsrm	PF00035.26	3.6e-35	2	2
ENSLBEP00000019596	dsrm	PF00035.26	4.2e-35	1	2
ENSLBEP00000019596	dsrm	PF00035.26	4.2e-35	2	2
ENSLBEP00000019585	DND1_DSRM	PF14709.7	6.2e-12	1	1
ENSLBEP00000019596	DND1_DSRM	PF14709.7	7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000020658	-	1065	XM_020636793	ENSLBEP00000019596	354 (aa)	XP_020492449	UPI0009B3AA05
ENSLBET00000020645	-	1032	-	ENSLBEP00000019585	343 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000015027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000015027's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000015027	tarbp2	94	43.963	ENSLBEG00000017208	prkra	91	43.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000015027	tarbp2	100	65.847	ENSG00000139546	TARBP2	88	92.208	Homo_sapiens
ENSLBEG00000015027	tarbp2	100	93.220	ENSAPOG00000019892	tarbp2	100	93.220	Acanthochromis_polyacanthus
ENSLBEG00000015027	tarbp2	97	68.195	ENSAMEG00000012601	TARBP2	100	65.940	Ailuropoda_melanoleuca
ENSLBEG00000015027	tarbp2	100	90.395	ENSACIG00000016780	tarbp2	100	90.395	Amphilophus_citrinellus
ENSLBEG00000015027	tarbp2	100	93.503	ENSAOCG00000005201	tarbp2	100	93.503	Amphiprion_ocellaris
ENSLBEG00000015027	tarbp2	100	93.503	ENSAPEG00000008376	tarbp2	100	93.503	Amphiprion_percula
ENSLBEG00000015027	tarbp2	100	92.938	ENSATEG00000025012	tarbp2	100	92.938	Anabas_testudineus
ENSLBEG00000015027	tarbp2	100	69.337	ENSACAG00000001100	TARBP2	100	68.508	Anolis_carolinensis
ENSLBEG00000015027	tarbp2	100	65.027	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSLBEG00000015027	tarbp2	97	89.244	ENSACLG00000018569	tarbp2	95	90.801	Astatotilapia_calliptera
ENSLBEG00000015027	tarbp2	100	82.817	ENSAMXG00000016665	tarbp2	100	83.099	Astyanax_mexicanus
ENSLBEG00000015027	tarbp2	100	66.120	ENSBTAG00000000435	TARBP2	100	66.485	Bos_taurus
ENSLBEG00000015027	tarbp2	100	65.301	ENSCJAG00000018668	TARBP2	100	65.395	Callithrix_jacchus
ENSLBEG00000015027	tarbp2	97	70.958	ENSCAFG00000006874	TARBP2	100	65.730	Canis_familiaris
ENSLBEG00000015027	tarbp2	100	66.120	ENSCAFG00020020735	TARBP2	100	68.406	Canis_lupus_dingo
ENSLBEG00000015027	tarbp2	97	68.272	ENSCHIG00000026017	TARBP2	100	65.499	Capra_hircus
ENSLBEG00000015027	tarbp2	100	66.393	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSLBEG00000015027	tarbp2	65	70.222	ENSCAPG00000008981	TARBP2	98	70.588	Cavia_aperea
ENSLBEG00000015027	tarbp2	100	66.213	ENSCPOG00000001009	TARBP2	100	66.485	Cavia_porcellus
ENSLBEG00000015027	tarbp2	98	66.201	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSLBEG00000015027	tarbp2	100	65.574	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSLBEG00000015027	tarbp2	100	64.770	ENSCLAG00000009175	TARBP2	100	65.940	Chinchilla_lanigera
ENSLBEG00000015027	tarbp2	100	65.574	ENSCSAG00000005479	TARBP2	100	65.395	Chlorocebus_sabaeus
ENSLBEG00000015027	tarbp2	99	71.591	ENSCPBG00000000654	TARBP2	100	72.353	Chrysemys_picta_bellii
ENSLBEG00000015027	tarbp2	100	65.847	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSLBEG00000015027	tarbp2	100	64.658	ENSCGRG00001011856	TARBP2	100	65.574	Cricetulus_griseus_chok1gshd
ENSLBEG00000015027	tarbp2	100	64.658	ENSCGRG00000009088	TARBP2	100	67.213	Cricetulus_griseus_crigri
ENSLBEG00000015027	tarbp2	100	89.548	ENSCSEG00000010631	tarbp2	100	89.548	Cynoglossus_semilaevis
ENSLBEG00000015027	tarbp2	100	89.266	ENSCVAG00000009832	tarbp2	100	89.266	Cyprinodon_variegatus
ENSLBEG00000015027	tarbp2	100	80.952	ENSDARG00000070471	tarbp2	100	81.513	Danio_rerio
ENSLBEG00000015027	tarbp2	97	68.481	ENSDNOG00000002144	TARBP2	100	66.485	Dasypus_novemcinctus
ENSLBEG00000015027	tarbp2	68	67.949	ENSDORG00000001390	Tarbp2	91	70.588	Dipodomys_ordii
ENSLBEG00000015027	tarbp2	82	92.593	ENSETEG00000002458	TARBP2	77	92.593	Echinops_telfairi
ENSLBEG00000015027	tarbp2	96	58.006	ENSEBUG00000002377	tarbp2	98	58.912	Eptatretus_burgeri
ENSLBEG00000015027	tarbp2	100	66.213	ENSEASG00005010030	TARBP2	100	66.485	Equus_asinus_asinus
ENSLBEG00000015027	tarbp2	100	66.480	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSLBEG00000015027	tarbp2	85	62.500	ENSEEUG00000001128	-	99	61.859	Erinaceus_europaeus
ENSLBEG00000015027	tarbp2	100	83.754	ENSELUG00000010642	tarbp2	100	84.594	Esox_lucius
ENSLBEG00000015027	tarbp2	100	65.147	ENSFCAG00000007757	TARBP2	100	66.485	Felis_catus
ENSLBEG00000015027	tarbp2	100	65.583	ENSFDAG00000011932	TARBP2	100	68.571	Fukomys_damarensis
ENSLBEG00000015027	tarbp2	95	89.970	ENSFHEG00000016118	tarbp2	100	89.970	Fundulus_heteroclitus
ENSLBEG00000015027	tarbp2	100	83.427	ENSGMOG00000001290	tarbp2	100	83.427	Gadus_morhua
ENSLBEG00000015027	tarbp2	64	73.059	ENSGALG00000038939	-	83	73.059	Gallus_gallus
ENSLBEG00000015027	tarbp2	100	88.983	ENSGAFG00000013341	tarbp2	100	88.983	Gambusia_affinis
ENSLBEG00000015027	tarbp2	100	88.187	ENSGACG00000006645	tarbp2	100	88.858	Gasterosteus_aculeatus
ENSLBEG00000015027	tarbp2	100	69.806	ENSGAGG00000021169	TARBP2	100	69.061	Gopherus_agassizii
ENSLBEG00000015027	tarbp2	97	67.416	ENSGGOG00000012637	TARBP2	81	85.938	Gorilla_gorilla
ENSLBEG00000015027	tarbp2	100	90.960	ENSHBUG00000018639	tarbp2	100	90.960	Haplochromis_burtoni
ENSLBEG00000015027	tarbp2	100	65.312	ENSHGLG00000001284	TARBP2	100	65.940	Heterocephalus_glaber_female
ENSLBEG00000015027	tarbp2	100	65.312	ENSHGLG00100011274	TARBP2	100	65.940	Heterocephalus_glaber_male
ENSLBEG00000015027	tarbp2	100	85.028	ENSHCOG00000001027	tarbp2	100	85.028	Hippocampus_comes
ENSLBEG00000015027	tarbp2	97	84.290	ENSIPUG00000023701	tarbp2	100	81.285	Ictalurus_punctatus
ENSLBEG00000015027	tarbp2	97	67.514	ENSSTOG00000003678	TARBP2	100	68.163	Ictidomys_tridecemlineatus
ENSLBEG00000015027	tarbp2	100	92.090	ENSKMAG00000012142	tarbp2	100	92.090	Kryptolebias_marmoratus
ENSLBEG00000015027	tarbp2	99	64.497	ENSLACG00000007087	TARBP2	76	91.228	Latimeria_chalumnae
ENSLBEG00000015027	tarbp2	100	79.944	ENSLOCG00000005711	tarbp2	100	79.661	Lepisosteus_oculatus
ENSLBEG00000015027	tarbp2	73	62.637	ENSLAFG00000002620	TARBP2	95	62.362	Loxodonta_africana
ENSLBEG00000015027	tarbp2	100	65.574	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSLBEG00000015027	tarbp2	100	65.847	ENSMMUG00000018492	TARBP2	100	65.668	Macaca_mulatta
ENSLBEG00000015027	tarbp2	100	65.574	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSLBEG00000015027	tarbp2	100	65.574	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSLBEG00000015027	tarbp2	96	89.091	ENSMAMG00000010272	tarbp2	97	87.464	Mastacembelus_armatus
ENSLBEG00000015027	tarbp2	100	91.525	ENSMZEG00005006895	tarbp2	100	91.525	Maylandia_zebra
ENSLBEG00000015027	tarbp2	100	64.932	ENSMAUG00000019805	Tarbp2	100	65.574	Mesocricetus_auratus
ENSLBEG00000015027	tarbp2	95	68.406	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSLBEG00000015027	tarbp2	100	65.847	ENSMOCG00000003691	Tarbp2	100	65.847	Microtus_ochrogaster
ENSLBEG00000015027	tarbp2	95	91.793	ENSMMOG00000010374	tarbp2	100	91.793	Mola_mola
ENSLBEG00000015027	tarbp2	100	91.808	ENSMALG00000009773	tarbp2	100	91.808	Monopterus_albus
ENSLBEG00000015027	tarbp2	100	65.753	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSLBEG00000015027	tarbp2	100	65.753	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSLBEG00000015027	tarbp2	100	65.753	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSLBEG00000015027	tarbp2	100	65.753	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSLBEG00000015027	tarbp2	100	66.393	ENSMPUG00000005944	TARBP2	100	66.393	Mustela_putorius_furo
ENSLBEG00000015027	tarbp2	100	66.757	ENSMLUG00000010035	TARBP2	100	67.030	Myotis_lucifugus
ENSLBEG00000015027	tarbp2	100	65.847	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSLBEG00000015027	tarbp2	100	68.644	ENSMEUG00000001916	TARBP2	100	66.667	Notamacropus_eugenii
ENSLBEG00000015027	tarbp2	65	72.000	ENSOPRG00000011397	TARBP2	98	72.398	Ochotona_princeps
ENSLBEG00000015027	tarbp2	61	70.306	ENSODEG00000013413	TARBP2	100	71.366	Octodon_degus
ENSLBEG00000015027	tarbp2	95	89.080	ENSONIG00000005115	tarbp2	96	89.080	Oreochromis_niloticus
ENSLBEG00000015027	tarbp2	100	66.940	ENSOCUG00000005700	TARBP2	100	66.940	Oryctolagus_cuniculus
ENSLBEG00000015027	tarbp2	100	90.113	ENSORLG00000005209	tarbp2	100	90.113	Oryzias_latipes
ENSLBEG00000015027	tarbp2	100	89.831	ENSORLG00020017755	tarbp2	100	89.831	Oryzias_latipes_hni
ENSLBEG00000015027	tarbp2	100	90.113	ENSORLG00015013237	tarbp2	100	90.113	Oryzias_latipes_hsok
ENSLBEG00000015027	tarbp2	100	90.678	ENSOMEG00000018860	tarbp2	100	90.678	Oryzias_melastigma
ENSLBEG00000015027	tarbp2	100	65.027	ENSOGAG00000001744	TARBP2	100	65.668	Otolemur_garnettii
ENSLBEG00000015027	tarbp2	100	65.847	ENSOARG00000016437	TARBP2	100	66.485	Ovis_aries
ENSLBEG00000015027	tarbp2	100	65.847	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSLBEG00000015027	tarbp2	97	68.195	ENSPPRG00000000189	TARBP2	100	66.213	Panthera_pardus
ENSLBEG00000015027	tarbp2	97	70.588	ENSPTIG00000007859	TARBP2	100	66.944	Panthera_tigris_altaica
ENSLBEG00000015027	tarbp2	100	65.847	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSLBEG00000015027	tarbp2	100	65.574	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSLBEG00000015027	tarbp2	100	78.082	ENSPKIG00000002455	tarbp2	100	79.552	Paramormyrops_kingsleyae
ENSLBEG00000015027	tarbp2	100	87.853	ENSPMGG00000006497	tarbp2	100	87.853	Periophthalmus_magnuspinnatus
ENSLBEG00000015027	tarbp2	100	65.027	ENSPEMG00000014285	Tarbp2	100	65.027	Peromyscus_maniculatus_bairdii
ENSLBEG00000015027	tarbp2	94	61.920	ENSPMAG00000000105	tarbp2	99	62.037	Petromyzon_marinus
ENSLBEG00000015027	tarbp2	100	68.079	ENSPCIG00000006672	TARBP2	92	67.797	Phascolarctos_cinereus
ENSLBEG00000015027	tarbp2	100	90.113	ENSPFOG00000007586	tarbp2	100	90.113	Poecilia_formosa
ENSLBEG00000015027	tarbp2	100	89.548	ENSPLAG00000017659	tarbp2	100	89.548	Poecilia_latipinna
ENSLBEG00000015027	tarbp2	100	90.113	ENSPMEG00000007775	tarbp2	100	90.113	Poecilia_mexicana
ENSLBEG00000015027	tarbp2	100	89.548	ENSPREG00000007815	tarbp2	100	89.548	Poecilia_reticulata
ENSLBEG00000015027	tarbp2	97	65.766	ENSPPYG00000004583	TARBP2	97	65.607	Pongo_abelii
ENSLBEG00000015027	tarbp2	80	64.605	ENSPCAG00000005352	TARBP2	60	71.946	Procavia_capensis
ENSLBEG00000015027	tarbp2	100	65.847	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSLBEG00000015027	tarbp2	100	64.946	ENSPVAG00000012286	TARBP2	100	64.754	Pteropus_vampyrus
ENSLBEG00000015027	tarbp2	100	91.243	ENSPNYG00000014125	tarbp2	100	91.243	Pundamilia_nyererei
ENSLBEG00000015027	tarbp2	100	82.535	ENSPNAG00000011128	tarbp2	100	83.380	Pygocentrus_nattereri
ENSLBEG00000015027	tarbp2	100	64.932	ENSRNOG00000042355	Tarbp2	100	65.574	Rattus_norvegicus
ENSLBEG00000015027	tarbp2	100	65.847	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSLBEG00000015027	tarbp2	100	65.847	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSLBEG00000015027	tarbp2	100	65.027	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSLBEG00000015027	tarbp2	97	68.986	ENSSHAG00000007064	TARBP2	100	70.336	Sarcophilus_harrisii
ENSLBEG00000015027	tarbp2	100	78.533	ENSSFOG00015010784	tarbp2	100	79.330	Scleropages_formosus
ENSLBEG00000015027	tarbp2	100	90.000	ENSSMAG00000012769	tarbp2	100	90.833	Scophthalmus_maximus
ENSLBEG00000015027	tarbp2	100	94.915	ENSSDUG00000018818	tarbp2	100	94.915	Seriola_dumerili
ENSLBEG00000015027	tarbp2	100	94.350	ENSSLDG00000001835	tarbp2	100	94.350	Seriola_lalandi_dorsalis
ENSLBEG00000015027	tarbp2	70	80.488	ENSSARG00000001010	TARBP2	67	80.488	Sorex_araneus
ENSLBEG00000015027	tarbp2	63	87.719	ENSSPUG00000005895	TARBP2	67	88.136	Sphenodon_punctatus
ENSLBEG00000015027	tarbp2	100	93.785	ENSSPAG00000022797	tarbp2	100	93.785	Stegastes_partitus
ENSLBEG00000015027	tarbp2	100	65.147	ENSSSCG00000000276	TARBP2	100	68.696	Sus_scrofa
ENSLBEG00000015027	tarbp2	72	57.588	ENSTGUG00000017031	TARBP2	100	57.588	Taeniopygia_guttata
ENSLBEG00000015027	tarbp2	100	90.395	ENSTRUG00000014379	tarbp2	100	90.395	Takifugu_rubripes
ENSLBEG00000015027	tarbp2	100	89.548	ENSTNIG00000007065	tarbp2	100	89.548	Tetraodon_nigroviridis
ENSLBEG00000015027	tarbp2	97	68.195	ENSTTRG00000017177	TARBP2	100	66.757	Tursiops_truncatus
ENSLBEG00000015027	tarbp2	100	66.213	ENSUAMG00000009011	TARBP2	100	66.213	Ursus_americanus
ENSLBEG00000015027	tarbp2	100	65.668	ENSUMAG00000010461	TARBP2	100	65.668	Ursus_maritimus
ENSLBEG00000015027	tarbp2	100	66.120	ENSVVUG00000028150	TARBP2	100	68.406	Vulpes_vulpes
ENSLBEG00000015027	tarbp2	97	71.091	ENSXETG00000012644	tarbp2	97	70.930	Xenopus_tropicalis
ENSLBEG00000015027	tarbp2	100	90.678	ENSXMAG00000017836	tarbp2	100	90.678	Xiphophorus_maculatus