EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000015081 (Gene tree)
Gene ID: 109988369
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 23942 bases
Position: chrFKLU01000138.1:1086571-1110512
Accession: 109988369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000020047	Exo_endo_phos	PF03372.23	1.2e-14	1	1
ENSLBEP00000019984	Exo_endo_phos	PF03372.23	1.6e-14	1	1
ENSLBEP00000020047	DUF1866	PF08952.11	6.3e-58	1	1
ENSLBEP00000019984	DUF1866	PF08952.11	7e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000021057	-	4350	XM_020639830	ENSLBEP00000019984	1449 (aa)	XP_020495486	-
ENSLBET00000021120	-	4020	XM_020639828	ENSLBEP00000020047	1339 (aa)	XP_020495484	-

Gene Model

Click here to download ENSLBEG00000015081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000015081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000015081	synj1	95	67.331	ENSG00000159082	SYNJ1	100	81.871	Homo_sapiens
ENSLBEG00000015081	synj1	87	92.870	ENSAPOG00000002809	synj1	100	84.889	Acanthochromis_polyacanthus
ENSLBEG00000015081	synj1	97	65.525	ENSAMEG00000015028	SYNJ1	69	74.281	Ailuropoda_melanoleuca
ENSLBEG00000015081	synj1	98	84.732	ENSACIG00000008857	synj1	99	85.824	Amphilophus_citrinellus
ENSLBEG00000015081	synj1	95	93.141	ENSAOCG00000009835	synj1	99	88.450	Amphiprion_ocellaris
ENSLBEG00000015081	synj1	99	86.819	ENSAPEG00000021010	synj1	90	87.828	Amphiprion_percula
ENSLBEG00000015081	synj1	99	85.149	ENSATEG00000002306	synj1	89	86.456	Anabas_testudineus
ENSLBEG00000015081	synj1	93	74.840	ENSAPLG00000011832	SYNJ1	70	73.548	Anas_platyrhynchos
ENSLBEG00000015081	synj1	82	76.221	ENSACAG00000003006	-	85	74.550	Anolis_carolinensis
ENSLBEG00000015081	synj1	99	65.379	ENSANAG00000027325	SYNJ1	96	67.884	Aotus_nancymaae
ENSLBEG00000015081	synj1	99	85.136	ENSACLG00000002255	synj1	100	86.207	Astatotilapia_calliptera
ENSLBEG00000015081	synj1	98	79.238	ENSAMXG00000008208	synj1	90	78.780	Astyanax_mexicanus
ENSLBEG00000015081	synj1	96	66.413	ENSBTAG00000003063	SYNJ1	84	74.753	Bos_taurus
ENSLBEG00000015081	synj1	97	64.033	ENSCJAG00000009187	SYNJ1	84	74.659	Callithrix_jacchus
ENSLBEG00000015081	synj1	99	64.490	ENSCAFG00000009041	SYNJ1	100	68.596	Canis_familiaris
ENSLBEG00000015081	synj1	97	66.114	ENSCAFG00020025776	SYNJ1	97	68.563	Canis_lupus_dingo
ENSLBEG00000015081	synj1	96	64.976	ENSCHIG00000005095	SYNJ1	89	66.570	Capra_hircus
ENSLBEG00000015081	synj1	98	63.866	ENSTSYG00000014541	SYNJ1	96	68.252	Carlito_syrichta
ENSLBEG00000015081	synj1	80	82.432	ENSCAPG00000014483	SYNJ1	73	82.432	Cavia_aperea
ENSLBEG00000015081	synj1	97	65.033	ENSCPOG00000012182	SYNJ1	82	74.503	Cavia_porcellus
ENSLBEG00000015081	synj1	98	63.038	ENSCCAG00000020825	SYNJ1	84	74.455	Cebus_capucinus
ENSLBEG00000015081	synj1	98	64.666	ENSCATG00000033891	SYNJ1	99	69.845	Cercocebus_atys
ENSLBEG00000015081	synj1	96	61.058	ENSCLAG00000009796	SYNJ1	100	81.241	Chinchilla_lanigera
ENSLBEG00000015081	synj1	82	74.955	ENSCSAG00000009654	SYNJ1	83	74.818	Chlorocebus_sabaeus
ENSLBEG00000015081	synj1	65	70.130	ENSCHOG00000012390	SYNJ1	54	70.707	Choloepus_hoffmanni
ENSLBEG00000015081	synj1	92	68.979	ENSCPBG00000006402	SYNJ1	88	75.362	Chrysemys_picta_bellii
ENSLBEG00000015081	synj1	98	63.815	ENSCANG00000031359	SYNJ1	84	74.818	Colobus_angolensis_palliatus
ENSLBEG00000015081	synj1	96	62.330	ENSCGRG00001010861	Synj1	82	74.278	Cricetulus_griseus_chok1gshd
ENSLBEG00000015081	synj1	82	74.458	ENSCGRG00000015749	Synj1	100	81.097	Cricetulus_griseus_crigri
ENSLBEG00000015081	synj1	91	91.877	ENSCSEG00000019614	synj1	98	88.702	Cynoglossus_semilaevis
ENSLBEG00000015081	synj1	95	93.051	ENSCVAG00000019250	synj1	99	84.831	Cyprinodon_variegatus
ENSLBEG00000015081	synj1	99	78.358	ENSDARG00000025011	synj1	100	80.319	Danio_rerio
ENSLBEG00000015081	synj1	97	62.870	ENSDNOG00000010732	SYNJ1	71	71.646	Dasypus_novemcinctus
ENSLBEG00000015081	synj1	54	78.738	ENSDORG00000014735	-	100	81.530	Dipodomys_ordii
ENSLBEG00000015081	synj1	69	76.923	ENSETEG00000018674	SYNJ1	60	76.923	Echinops_telfairi
ENSLBEG00000015081	synj1	99	65.691	ENSEASG00005006287	SYNJ1	96	77.849	Equus_asinus_asinus
ENSLBEG00000015081	synj1	99	66.104	ENSECAG00000004829	SYNJ1	99	69.386	Equus_caballus
ENSLBEG00000015081	synj1	88	69.030	ENSEEUG00000005150	SYNJ1	60	69.030	Erinaceus_europaeus
ENSLBEG00000015081	synj1	99	74.963	ENSELUG00000009731	synj1	99	74.574	Esox_lucius
ENSLBEG00000015081	synj1	96	64.812	ENSFCAG00000012498	SYNJ1	99	68.827	Felis_catus
ENSLBEG00000015081	synj1	73	54.810	ENSFALG00000004680	SYNJ1	59	71.390	Ficedula_albicollis
ENSLBEG00000015081	synj1	82	74.955	ENSFDAG00000016818	SYNJ1	100	81.674	Fukomys_damarensis
ENSLBEG00000015081	synj1	99	82.044	ENSFHEG00000017689	synj1	92	82.187	Fundulus_heteroclitus
ENSLBEG00000015081	synj1	80	85.604	ENSGMOG00000014852	synj1	81	85.406	Gadus_morhua
ENSLBEG00000015081	synj1	98	63.970	ENSGALG00000034317	SYNJ1	85	66.245	Gallus_gallus
ENSLBEG00000015081	synj1	99	83.555	ENSGAFG00000019466	synj1	91	84.225	Gambusia_affinis
ENSLBEG00000015081	synj1	99	81.913	ENSGACG00000020575	synj1	99	84.498	Gasterosteus_aculeatus
ENSLBEG00000015081	synj1	95	67.634	ENSGAGG00000022523	SYNJ1	82	75.434	Gopherus_agassizii
ENSLBEG00000015081	synj1	96	66.591	ENSGGOG00000015945	SYNJ1	99	69.528	Gorilla_gorilla
ENSLBEG00000015081	synj1	99	84.716	ENSHBUG00000007774	synj1	100	86.282	Haplochromis_burtoni
ENSLBEG00000015081	synj1	96	63.125	ENSHGLG00000006420	SYNJ1	100	81.097	Heterocephalus_glaber_female
ENSLBEG00000015081	synj1	91	69.243	ENSHGLG00100012591	SYNJ1	100	81.097	Heterocephalus_glaber_male
ENSLBEG00000015081	synj1	94	90.857	ENSHCOG00000012774	synj1	97	90.857	Hippocampus_comes
ENSLBEG00000015081	synj1	98	79.713	ENSIPUG00000010691	SYNJ1	92	78.222	Ictalurus_punctatus
ENSLBEG00000015081	synj1	97	65.651	ENSSTOG00000015806	SYNJ1	84	74.842	Ictidomys_tridecemlineatus
ENSLBEG00000015081	synj1	95	61.195	ENSJJAG00000020168	Synj1	89	61.654	Jaculus_jaculus
ENSLBEG00000015081	synj1	95	91.065	ENSKMAG00000004221	synj1	93	85.870	Kryptolebias_marmoratus
ENSLBEG00000015081	synj1	81	75.366	ENSLACG00000005928	SYNJ1	71	74.642	Latimeria_chalumnae
ENSLBEG00000015081	synj1	98	67.568	ENSLOCG00000009230	synj1	74	80.901	Lepisosteus_oculatus
ENSLBEG00000015081	synj1	97	64.562	ENSLAFG00000011806	SYNJ1	70	73.209	Loxodonta_africana
ENSLBEG00000015081	synj1	96	64.171	ENSMFAG00000018883	SYNJ1	84	73.551	Macaca_fascicularis
ENSLBEG00000015081	synj1	98	61.716	ENSMMUG00000004624	SYNJ1	83	75.000	Macaca_mulatta
ENSLBEG00000015081	synj1	98	64.016	ENSMNEG00000040077	SYNJ1	79	74.818	Macaca_nemestrina
ENSLBEG00000015081	synj1	98	64.690	ENSMLEG00000037029	SYNJ1	84	74.727	Mandrillus_leucophaeus
ENSLBEG00000015081	synj1	99	85.828	ENSMAMG00000013404	synj1	90	86.061	Mastacembelus_armatus
ENSLBEG00000015081	synj1	99	85.136	ENSMZEG00005024358	synj1	100	87.207	Maylandia_zebra
ENSLBEG00000015081	synj1	98	62.233	ENSMGAG00000014522	SYNJ1	85	63.959	Meleagris_gallopavo
ENSLBEG00000015081	synj1	82	74.864	ENSMAUG00000009743	Synj1	100	81.241	Mesocricetus_auratus
ENSLBEG00000015081	synj1	96	64.355	ENSMICG00000034953	SYNJ1	99	69.938	Microcebus_murinus
ENSLBEG00000015081	synj1	91	88.216	ENSMMOG00000010203	synj1	99	85.135	Mola_mola
ENSLBEG00000015081	synj1	83	71.043	ENSMODG00000021073	SYNJ1	83	70.525	Monodelphis_domestica
ENSLBEG00000015081	synj1	96	93.231	ENSMALG00000014015	synj1	90	85.485	Monopterus_albus
ENSLBEG00000015081	synj1	97	66.021	MGP_CAROLIEiJ_G0020951	Synj1	100	81.674	Mus_caroli
ENSLBEG00000015081	synj1	97	66.244	ENSMUSG00000022973	Synj1	100	81.674	Mus_musculus
ENSLBEG00000015081	synj1	97	66.114	MGP_PahariEiJ_G0016656	Synj1	100	81.674	Mus_pahari
ENSLBEG00000015081	synj1	97	66.219	MGP_SPRETEiJ_G0021857	Synj1	100	81.818	Mus_spretus
ENSLBEG00000015081	synj1	96	63.376	ENSMPUG00000001153	SYNJ1	70	74.014	Mustela_putorius_furo
ENSLBEG00000015081	synj1	59	55.875	ENSMLUG00000005764	-	77	59.349	Myotis_lucifugus
ENSLBEG00000015081	synj1	53	77.054	ENSMLUG00000026584	-	100	79.701	Myotis_lucifugus
ENSLBEG00000015081	synj1	97	65.288	ENSNGAG00000000453	Synj1	100	81.530	Nannospalax_galili
ENSLBEG00000015081	synj1	98	81.216	ENSNBRG00000011936	synj1	99	81.370	Neolamprologus_brichardi
ENSLBEG00000015081	synj1	85	58.503	ENSNLEG00000003734	SYNJ1	98	64.162	Nomascus_leucogenys
ENSLBEG00000015081	synj1	74	62.738	ENSMEUG00000004158	-	65	61.883	Notamacropus_eugenii
ENSLBEG00000015081	synj1	88	75.942	ENSOPRG00000013602	SYNJ1	64	75.942	Ochotona_princeps
ENSLBEG00000015081	synj1	54	78.464	ENSODEG00000002409	-	100	81.241	Octodon_degus
ENSLBEG00000015081	synj1	97	92.523	ENSONIG00000004667	synj1	100	82.405	Oreochromis_niloticus
ENSLBEG00000015081	synj1	77	74.687	ENSOANG00000006929	SYNJ1	69	72.872	Ornithorhynchus_anatinus
ENSLBEG00000015081	synj1	96	61.837	ENSOCUG00000001420	SYNJ1	67	76.177	Oryctolagus_cuniculus
ENSLBEG00000015081	synj1	96	89.250	ENSORLG00000004320	synj1	100	83.108	Oryzias_latipes
ENSLBEG00000015081	synj1	94	87.906	ENSORLG00020011994	synj1	98	82.532	Oryzias_latipes_hni
ENSLBEG00000015081	synj1	99	83.856	ENSORLG00015018077	synj1	88	84.595	Oryzias_latipes_hsok
ENSLBEG00000015081	synj1	99	83.694	ENSOMEG00000014322	synj1	100	84.285	Oryzias_melastigma
ENSLBEG00000015081	synj1	96	60.654	ENSOGAG00000006010	SYNJ1	68	71.724	Otolemur_garnettii
ENSLBEG00000015081	synj1	96	62.221	ENSOARG00000013414	SYNJ1	69	73.656	Ovis_aries
ENSLBEG00000015081	synj1	98	63.154	ENSPPAG00000026784	SYNJ1	84	74.909	Pan_paniscus
ENSLBEG00000015081	synj1	96	65.251	ENSPPRG00000023469	SYNJ1	99	68.827	Panthera_pardus
ENSLBEG00000015081	synj1	96	65.320	ENSPTIG00000007930	SYNJ1	99	68.904	Panthera_tigris_altaica
ENSLBEG00000015081	synj1	95	67.255	ENSPTRG00000048135	-	99	69.922	Pan_troglodytes
ENSLBEG00000015081	synj1	95	67.255	ENSPTRG00000023787	SYNJ1	99	69.922	Pan_troglodytes
ENSLBEG00000015081	synj1	98	64.617	ENSPANG00000022531	SYNJ1	84	74.818	Papio_anubis
ENSLBEG00000015081	synj1	82	84.859	ENSPKIG00000022603	synj1	90	84.163	Paramormyrops_kingsleyae
ENSLBEG00000015081	synj1	99	82.943	ENSPMGG00000016831	synj1	93	83.886	Periophthalmus_magnuspinnatus
ENSLBEG00000015081	synj1	82	75.407	ENSPEMG00000018767	Synj1	100	81.962	Peromyscus_maniculatus_bairdii
ENSLBEG00000015081	synj1	78	57.880	ENSPMAG00000002887	synj1	74	59.799	Petromyzon_marinus
ENSLBEG00000015081	synj1	96	64.143	ENSPCIG00000016372	SYNJ1	82	74.492	Phascolarctos_cinereus
ENSLBEG00000015081	synj1	98	83.745	ENSPFOG00000016886	synj1	100	85.336	Poecilia_formosa
ENSLBEG00000015081	synj1	94	92.683	ENSPLAG00000017559	synj1	100	83.941	Poecilia_latipinna
ENSLBEG00000015081	synj1	98	85.146	ENSPMEG00000007643	synj1	91	83.233	Poecilia_mexicana
ENSLBEG00000015081	synj1	99	83.802	ENSPREG00000012412	synj1	100	84.981	Poecilia_reticulata
ENSLBEG00000015081	synj1	82	74.774	ENSPPYG00000011365	SYNJ1	78	74.636	Pongo_abelii
ENSLBEG00000015081	synj1	69	82.857	ENSPCAG00000009906	SYNJ1	55	82.857	Procavia_capensis
ENSLBEG00000015081	synj1	89	74.495	ENSPCOG00000024841	SYNJ1	94	71.096	Propithecus_coquereli
ENSLBEG00000015081	synj1	82	70.886	ENSPVAG00000000892	SYNJ1	82	64.859	Pteropus_vampyrus
ENSLBEG00000015081	synj1	99	81.745	ENSPNYG00000022989	synj1	100	86.207	Pundamilia_nyererei
ENSLBEG00000015081	synj1	82	87.284	ENSPNAG00000021119	synj1	91	87.135	Pygocentrus_nattereri
ENSLBEG00000015081	synj1	96	66.947	ENSRNOG00000002051	Synj1	85	74.617	Rattus_norvegicus
ENSLBEG00000015081	synj1	98	63.020	ENSRBIG00000034477	SYNJ1	84	74.727	Rhinopithecus_bieti
ENSLBEG00000015081	synj1	96	64.697	ENSRROG00000039256	SYNJ1	96	63.610	Rhinopithecus_roxellana
ENSLBEG00000015081	synj1	97	63.378	ENSSBOG00000021001	SYNJ1	84	74.545	Saimiri_boliviensis_boliviensis
ENSLBEG00000015081	synj1	96	62.526	ENSSHAG00000008538	SYNJ1	70	74.382	Sarcophilus_harrisii
ENSLBEG00000015081	synj1	99	78.450	ENSSFOG00015006095	synj1	92	76.601	Scleropages_formosus
ENSLBEG00000015081	synj1	99	85.303	ENSSMAG00000018066	synj1	99	85.229	Scophthalmus_maximus
ENSLBEG00000015081	synj1	99	87.441	ENSSDUG00000013058	synj1	90	87.483	Seriola_dumerili
ENSLBEG00000015081	synj1	99	86.968	ENSSLDG00000021406	synj1	100	87.224	Seriola_lalandi_dorsalis
ENSLBEG00000015081	synj1	96	64.395	ENSSPUG00000012552	SYNJ1	84	66.993	Sphenodon_punctatus
ENSLBEG00000015081	synj1	95	86.332	ENSSPAG00000006812	SYNJ1	90	87.420	Stegastes_partitus
ENSLBEG00000015081	synj1	98	89.018	ENSSPAG00000017029	synj1	99	86.988	Stegastes_partitus
ENSLBEG00000015081	synj1	96	63.561	ENSSSCG00000012035	SYNJ1	100	65.846	Sus_scrofa
ENSLBEG00000015081	synj1	99	64.394	ENSTGUG00000013445	SYNJ1	84	67.186	Taeniopygia_guttata
ENSLBEG00000015081	synj1	99	85.007	ENSTRUG00000006907	synj1	97	85.271	Takifugu_rubripes
ENSLBEG00000015081	synj1	88	86.809	ENSTNIG00000009940	synj1	99	79.777	Tetraodon_nigroviridis
ENSLBEG00000015081	synj1	83	82.911	ENSTBEG00000016298	SYNJ1	60	74.037	Tupaia_belangeri
ENSLBEG00000015081	synj1	93	74.812	ENSTTRG00000002222	SYNJ1	66	75.714	Tursiops_truncatus
ENSLBEG00000015081	synj1	99	66.006	ENSUAMG00000018606	SYNJ1	98	78.555	Ursus_americanus
ENSLBEG00000015081	synj1	98	64.892	ENSUMAG00000018419	SYNJ1	99	77.731	Ursus_maritimus
ENSLBEG00000015081	synj1	82	82.857	ENSVPAG00000001241	SYNJ1	68	82.857	Vicugna_pacos
ENSLBEG00000015081	synj1	97	65.639	ENSVVUG00000023125	SYNJ1	84	74.101	Vulpes_vulpes
ENSLBEG00000015081	synj1	98	59.365	ENSXETG00000009899	synj1	70	72.857	Xenopus_tropicalis
ENSLBEG00000015081	synj1	99	84.167	ENSXCOG00000011896	synj1	99	86.584	Xiphophorus_couchianus
ENSLBEG00000015081	synj1	98	84.494	ENSXMAG00000017524	synj1	100	85.227	Xiphophorus_maculatus