EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000015294 (Gene tree)
Gene ID: 109998231
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1B-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 2841 bases
Position: chrFKLU01000468.1:117202-120042
Accession: 109998231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000019889	RRM_1	PF00076.22	2.9e-33	1	2
ENSLBEP00000019889	RRM_1	PF00076.22	2.9e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000020962	-	1107	XM_020653004	ENSLBEP00000019889	249 (aa)	XP_020508660	UPI0009B3F794

Gene Model

Click here to download ENSLBEG00000015294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000015294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000015294	-	78	61.340	ENSLBEG00000017430	srsf9	74	65.152
ENSLBEG00000015294	-	65	47.126	ENSLBEG00000013647	srsf5b	58	45.143
ENSLBEG00000015294	-	79	82.653	ENSLBEG00000020864	-	83	81.122
ENSLBEG00000015294	-	67	43.085	ENSLBEG00000017153	srsf5a	69	42.021

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000015294	-	98	83.133	ENSG00000136450	SRSF1	100	78.462	Homo_sapiens
ENSLBEG00000015294	-	79	81.122	ENSAPOG00000002748	-	78	80.102	Acanthochromis_polyacanthus
ENSLBEG00000015294	-	80	88.177	ENSAPOG00000008542	-	94	86.809	Acanthochromis_polyacanthus
ENSLBEG00000015294	-	80	82.000	ENSAMEG00000002635	SRSF1	79	83.000	Ailuropoda_melanoleuca
ENSLBEG00000015294	-	79	81.122	ENSACIG00000008091	srsf1a	83	79.592	Amphilophus_citrinellus
ENSLBEG00000015294	-	80	88.177	ENSAOCG00000000337	-	95	86.809	Amphiprion_ocellaris
ENSLBEG00000015294	-	79	81.633	ENSAOCG00000010671	-	83	80.102	Amphiprion_ocellaris
ENSLBEG00000015294	-	79	81.633	ENSAPEG00000009915	-	83	80.102	Amphiprion_percula
ENSLBEG00000015294	-	80	88.177	ENSAPEG00000023352	-	93	86.809	Amphiprion_percula
ENSLBEG00000015294	-	83	82.039	ENSATEG00000021567	-	81	84.000	Anabas_testudineus
ENSLBEG00000015294	-	79	81.633	ENSATEG00000022403	-	77	80.102	Anabas_testudineus
ENSLBEG00000015294	-	80	87.000	ENSACAG00000005542	-	79	86.000	Anolis_carolinensis
ENSLBEG00000015294	-	82	60.099	ENSANAG00000025417	-	75	59.000	Aotus_nancymaae
ENSLBEG00000015294	-	98	83.133	ENSANAG00000020583	-	99	77.778	Aotus_nancymaae
ENSLBEG00000015294	-	94	81.590	ENSAMXG00000035996	srsf1a	79	87.437	Astyanax_mexicanus
ENSLBEG00000015294	-	55	76.774	ENSAMXG00000024373	-	72	75.472	Astyanax_mexicanus
ENSLBEG00000015294	-	98	83.133	ENSBTAG00000014766	SRSF1	79	84.500	Bos_taurus
ENSLBEG00000015294	-	98	83.133	ENSCJAG00000041713	-	99	77.778	Callithrix_jacchus
ENSLBEG00000015294	-	80	78.392	ENSCJAG00000008111	-	88	77.000	Callithrix_jacchus
ENSLBEG00000015294	-	98	83.133	ENSCAFG00000017430	SRSF1	78	84.500	Canis_familiaris
ENSLBEG00000015294	-	98	83.133	ENSCAFG00020025632	-	78	84.500	Canis_lupus_dingo
ENSLBEG00000015294	-	80	85.500	ENSCHIG00000010787	SRSF1	79	84.500	Capra_hircus
ENSLBEG00000015294	-	98	83.133	ENSTSYG00000013899	-	99	77.778	Carlito_syrichta
ENSLBEG00000015294	-	98	83.133	ENSCPOG00000032681	-	79	84.500	Cavia_porcellus
ENSLBEG00000015294	-	98	83.133	ENSCCAG00000029484	-	99	77.778	Cebus_capucinus
ENSLBEG00000015294	-	98	83.133	ENSCATG00000042294	-	99	77.778	Cercocebus_atys
ENSLBEG00000015294	-	98	83.133	ENSCLAG00000014707	-	79	84.500	Chinchilla_lanigera
ENSLBEG00000015294	-	98	82.329	ENSCSAG00000005642	-	78	83.500	Chlorocebus_sabaeus
ENSLBEG00000015294	-	80	85.500	ENSCHOG00000001899	SRSF1	79	84.500	Choloepus_hoffmanni
ENSLBEG00000015294	-	98	84.337	ENSCPBG00000009851	-	79	86.000	Chrysemys_picta_bellii
ENSLBEG00000015294	-	98	83.133	ENSCANG00000029726	-	99	77.778	Colobus_angolensis_palliatus
ENSLBEG00000015294	-	98	83.133	ENSCGRG00001000670	Srsf1	78	84.500	Cricetulus_griseus_chok1gshd
ENSLBEG00000015294	-	98	83.133	ENSCGRG00000005590	Srsf1	79	84.500	Cricetulus_griseus_crigri
ENSLBEG00000015294	-	80	82.075	ENSCSEG00000009973	-	81	79.717	Cynoglossus_semilaevis
ENSLBEG00000015294	-	79	84.694	ENSCSEG00000014272	-	78	84.694	Cynoglossus_semilaevis
ENSLBEG00000015294	-	79	81.633	ENSCVAG00000018617	-	78	80.102	Cyprinodon_variegatus
ENSLBEG00000015294	-	80	86.935	ENSCVAG00000005458	-	92	86.096	Cyprinodon_variegatus
ENSLBEG00000015294	-	79	87.310	ENSDARG00000017843	srsf1b	79	86.294	Danio_rerio
ENSLBEG00000015294	-	79	82.843	ENSDARG00000057691	srsf1a	99	84.293	Danio_rerio
ENSLBEG00000015294	-	98	83.133	ENSDNOG00000011737	-	78	84.500	Dasypus_novemcinctus
ENSLBEG00000015294	-	98	83.133	ENSDORG00000015082	Srsf1	79	84.500	Dipodomys_ordii
ENSLBEG00000015294	-	75	83.957	ENSETEG00000005349	-	63	81.818	Echinops_telfairi
ENSLBEG00000015294	-	98	83.133	ENSEASG00005002922	-	78	84.500	Equus_asinus_asinus
ENSLBEG00000015294	-	80	85.500	ENSECAG00000016654	SRSF1	79	84.500	Equus_caballus
ENSLBEG00000015294	-	75	85.027	ENSEEUG00000009255	-	63	82.888	Erinaceus_europaeus
ENSLBEG00000015294	-	79	84.264	ENSELUG00000021646	srsf1a	77	83.249	Esox_lucius
ENSLBEG00000015294	-	98	83.133	ENSFCAG00000002250	-	92	82.888	Felis_catus
ENSLBEG00000015294	-	75	87.218	ENSFALG00000005062	-	78	67.000	Ficedula_albicollis
ENSLBEG00000015294	-	98	83.133	ENSFDAG00000010646	-	79	84.500	Fukomys_damarensis
ENSLBEG00000015294	-	79	81.633	ENSFHEG00000003174	srsf1a	83	80.102	Fundulus_heteroclitus
ENSLBEG00000015294	-	91	81.498	ENSGMOG00000014787	-	94	80.617	Gadus_morhua
ENSLBEG00000015294	-	80	87.000	ENSGALG00000005525	SRSF1	79	86.000	Gallus_gallus
ENSLBEG00000015294	-	80	84.500	ENSGACG00000020621	srsf1b	80	82.500	Gasterosteus_aculeatus
ENSLBEG00000015294	-	98	84.337	ENSGAGG00000022965	-	78	86.000	Gopherus_agassizii
ENSLBEG00000015294	-	98	83.133	ENSGGOG00000004386	SRSF1	99	77.778	Gorilla_gorilla
ENSLBEG00000015294	-	79	81.122	ENSHBUG00000016788	srsf1a	80	79.592	Haplochromis_burtoni
ENSLBEG00000015294	-	67	88.623	ENSHGLG00000000600	-	76	87.425	Heterocephalus_glaber_female
ENSLBEG00000015294	-	67	88.623	ENSHGLG00000000669	-	76	87.425	Heterocephalus_glaber_female
ENSLBEG00000015294	-	98	83.133	ENSHGLG00100016906	-	79	84.500	Heterocephalus_glaber_male
ENSLBEG00000015294	-	79	77.665	ENSHCOG00000018918	srsf1a	77	79.695	Hippocampus_comes
ENSLBEG00000015294	-	80	86.000	ENSIPUG00000008750	srsf1b	80	85.500	Ictalurus_punctatus
ENSLBEG00000015294	-	93	80.753	ENSIPUG00000017039	srsf1a	79	86.432	Ictalurus_punctatus
ENSLBEG00000015294	-	98	83.133	ENSSTOG00000000243	-	92	82.888	Ictidomys_tridecemlineatus
ENSLBEG00000015294	-	98	83.133	ENSJJAG00000000102	-	79	84.500	Jaculus_jaculus
ENSLBEG00000015294	-	52	76.154	ENSJJAG00000014464	-	95	74.615	Jaculus_jaculus
ENSLBEG00000015294	-	79	81.633	ENSKMAG00000019232	srsf1a	78	80.612	Kryptolebias_marmoratus
ENSLBEG00000015294	-	79	84.772	ENSLACG00000014160	srsf1a	73	84.264	Latimeria_chalumnae
ENSLBEG00000015294	-	80	85.500	ENSLOCG00000005994	srsf1a	79	85.000	Lepisosteus_oculatus
ENSLBEG00000015294	-	80	85.500	ENSLAFG00000025743	SRSF1	79	84.500	Loxodonta_africana
ENSLBEG00000015294	-	98	83.133	ENSMFAG00000040003	-	99	77.778	Macaca_fascicularis
ENSLBEG00000015294	-	99	80.000	ENSMMUG00000003260	-	95	80.402	Macaca_mulatta
ENSLBEG00000015294	-	98	83.133	ENSMMUG00000004725	SRSF1	99	77.778	Macaca_mulatta
ENSLBEG00000015294	-	98	83.133	ENSMNEG00000027680	-	99	77.778	Macaca_nemestrina
ENSLBEG00000015294	-	99	79.600	ENSMNEG00000015983	-	78	81.000	Macaca_nemestrina
ENSLBEG00000015294	-	98	78.313	ENSMLEG00000015243	-	77	81.000	Mandrillus_leucophaeus
ENSLBEG00000015294	-	80	85.500	ENSMLEG00000040509	SRSF1	79	84.500	Mandrillus_leucophaeus
ENSLBEG00000015294	-	80	86.000	ENSMAMG00000019691	-	95	84.914	Mastacembelus_armatus
ENSLBEG00000015294	-	79	81.633	ENSMAMG00000018454	-	78	80.102	Mastacembelus_armatus
ENSLBEG00000015294	-	80	83.000	ENSMAMG00000019687	-	80	82.500	Mastacembelus_armatus
ENSLBEG00000015294	-	98	83.133	ENSMAUG00000021845	Srsf1	79	84.500	Mesocricetus_auratus
ENSLBEG00000015294	-	98	83.133	ENSMICG00000013639	-	99	77.778	Microcebus_murinus
ENSLBEG00000015294	-	98	83.133	ENSMOCG00000001996	Srsf1	79	84.500	Microtus_ochrogaster
ENSLBEG00000015294	-	79	82.143	ENSMMOG00000014354	srsf1a	83	80.612	Mola_mola
ENSLBEG00000015294	-	75	85.027	ENSMODG00000014781	-	63	84.492	Monodelphis_domestica
ENSLBEG00000015294	-	79	81.122	ENSMALG00000017129	-	75	79.592	Monopterus_albus
ENSLBEG00000015294	-	83	74.396	ENSMALG00000007763	-	79	74.000	Monopterus_albus
ENSLBEG00000015294	-	98	83.133	MGP_CAROLIEiJ_G0016943	Srsf1	92	82.888	Mus_caroli
ENSLBEG00000015294	-	98	83.133	ENSMUSG00000018379	Srsf1	92	82.888	Mus_musculus
ENSLBEG00000015294	-	98	83.133	MGP_PahariEiJ_G0018074	Srsf1	79	84.500	Mus_pahari
ENSLBEG00000015294	-	98	83.133	MGP_SPRETEiJ_G0017790	Srsf1	92	82.888	Mus_spretus
ENSLBEG00000015294	-	80	85.500	ENSMPUG00000015369	SRSF1	79	84.500	Mustela_putorius_furo
ENSLBEG00000015294	-	80	85.500	ENSMLUG00000011040	SRSF1	79	84.500	Myotis_lucifugus
ENSLBEG00000015294	-	83	80.097	ENSMLUG00000023995	-	79	79.500	Myotis_lucifugus
ENSLBEG00000015294	-	80	85.500	ENSNGAG00000011395	Srsf1	79	84.500	Nannospalax_galili
ENSLBEG00000015294	-	99	76.518	ENSNBRG00000008041	srsf1b	80	75.000	Neolamprologus_brichardi
ENSLBEG00000015294	-	98	83.133	ENSNLEG00000008088	-	99	77.778	Nomascus_leucogenys
ENSLBEG00000015294	-	52	80.620	ENSMEUG00000002783	-	100	79.845	Notamacropus_eugenii
ENSLBEG00000015294	-	54	88.889	ENSOPRG00000001234	-	72	87.407	Ochotona_princeps
ENSLBEG00000015294	-	98	83.065	ENSODEG00000011481	-	79	84.000	Octodon_degus
ENSLBEG00000015294	-	95	85.593	ENSONIG00000004860	-	81	84.500	Oreochromis_niloticus
ENSLBEG00000015294	-	79	81.122	ENSONIG00000013160	-	77	79.592	Oreochromis_niloticus
ENSLBEG00000015294	-	94	64.050	ENSOCUG00000010894	-	72	68.649	Oryctolagus_cuniculus
ENSLBEG00000015294	-	79	81.633	ENSORLG00000004580	srsf1a	78	80.102	Oryzias_latipes
ENSLBEG00000015294	-	79	81.633	ENSORLG00020009456	srsf1a	83	80.102	Oryzias_latipes_hni
ENSLBEG00000015294	-	79	81.633	ENSORLG00015014384	srsf1a	83	80.102	Oryzias_latipes_hsok
ENSLBEG00000015294	-	72	81.564	ENSOMEG00000004106	srsf1a	71	79.888	Oryzias_melastigma
ENSLBEG00000015294	-	85	86.256	ENSOGAG00000025950	-	79	84.500	Otolemur_garnettii
ENSLBEG00000015294	-	80	80.500	ENSOARG00000008323	SRSF1	78	80.000	Ovis_aries
ENSLBEG00000015294	-	98	83.133	ENSPPAG00000043403	-	99	77.778	Pan_paniscus
ENSLBEG00000015294	-	98	83.133	ENSPPRG00000004238	-	92	82.888	Panthera_pardus
ENSLBEG00000015294	-	98	83.133	ENSPTRG00000049077	SRSF1	99	77.778	Pan_troglodytes
ENSLBEG00000015294	-	98	83.133	ENSPANG00000022305	-	99	77.778	Papio_anubis
ENSLBEG00000015294	-	98	63.563	ENSPANG00000030275	-	75	59.799	Papio_anubis
ENSLBEG00000015294	-	79	82.741	ENSPKIG00000007204	srsf1a	83	83.163	Paramormyrops_kingsleyae
ENSLBEG00000015294	-	80	86.000	ENSPKIG00000012857	srsf1b	80	85.500	Paramormyrops_kingsleyae
ENSLBEG00000015294	-	80	81.000	ENSPSIG00000009000	-	72	89.706	Pelodiscus_sinensis
ENSLBEG00000015294	-	79	80.303	ENSPMGG00000013112	-	78	83.957	Periophthalmus_magnuspinnatus
ENSLBEG00000015294	-	96	80.165	ENSPMGG00000005467	-	77	83.511	Periophthalmus_magnuspinnatus
ENSLBEG00000015294	-	98	83.133	ENSPEMG00000021416	Srsf1	79	84.500	Peromyscus_maniculatus_bairdii
ENSLBEG00000015294	-	80	85.500	ENSPCIG00000006076	-	80	84.500	Phascolarctos_cinereus
ENSLBEG00000015294	-	82	86.700	ENSPFOG00000018325	-	70	85.930	Poecilia_formosa
ENSLBEG00000015294	-	82	87.192	ENSPLAG00000008416	srsf1b	80	85.930	Poecilia_latipinna
ENSLBEG00000015294	-	51	75.397	ENSPMEG00000020607	-	98	73.810	Poecilia_mexicana
ENSLBEG00000015294	-	82	87.192	ENSPMEG00000002388	-	80	85.930	Poecilia_mexicana
ENSLBEG00000015294	-	51	75.397	ENSPMEG00000014312	-	98	73.810	Poecilia_mexicana
ENSLBEG00000015294	-	79	81.633	ENSPREG00000009667	srsf1a	78	80.102	Poecilia_reticulata
ENSLBEG00000015294	-	98	83.133	ENSPPYG00000008240	SRSF1	79	84.500	Pongo_abelii
ENSLBEG00000015294	-	80	85.500	ENSPCAG00000005199	SRSF1	79	84.500	Procavia_capensis
ENSLBEG00000015294	-	98	83.133	ENSPCOG00000023654	-	99	77.778	Propithecus_coquereli
ENSLBEG00000015294	-	81	68.317	ENSPCOG00000025736	-	95	67.839	Propithecus_coquereli
ENSLBEG00000015294	-	54	94.286	ENSPVAG00000000519	-	54	94.286	Pteropus_vampyrus
ENSLBEG00000015294	-	94	81.435	ENSPNAG00000022241	srsf1a	78	83.249	Pygocentrus_nattereri
ENSLBEG00000015294	-	80	83.500	ENSPNAG00000014601	srsf1b	80	83.000	Pygocentrus_nattereri
ENSLBEG00000015294	-	80	85.500	ENSRNOG00000050323	Srsf1	79	84.500	Rattus_norvegicus
ENSLBEG00000015294	-	98	83.133	ENSRBIG00000034445	-	99	77.778	Rhinopithecus_bieti
ENSLBEG00000015294	-	98	83.133	ENSRROG00000041506	-	99	77.778	Rhinopithecus_roxellana
ENSLBEG00000015294	-	98	83.133	ENSSBOG00000025377	-	99	77.778	Saimiri_boliviensis_boliviensis
ENSLBEG00000015294	-	80	85.500	ENSSHAG00000002552	-	80	84.500	Sarcophilus_harrisii
ENSLBEG00000015294	-	80	85.427	ENSSFOG00015004800	srsf1a	79	83.920	Scleropages_formosus
ENSLBEG00000015294	-	79	82.653	ENSSMAG00000007018	-	78	81.122	Scophthalmus_maximus
ENSLBEG00000015294	-	80	87.745	ENSSMAG00000009719	-	80	84.804	Scophthalmus_maximus
ENSLBEG00000015294	-	79	82.653	ENSSDUG00000011303	-	83	81.122	Seriola_dumerili
ENSLBEG00000015294	-	98	74.286	ENSSDUG00000003929	-	84	79.000	Seriola_dumerili
ENSLBEG00000015294	-	94	71.489	ENSSLDG00000016895	-	78	78.947	Seriola_lalandi_dorsalis
ENSLBEG00000015294	-	79	82.653	ENSSLDG00000010543	-	78	81.122	Seriola_lalandi_dorsalis
ENSLBEG00000015294	-	80	78.500	ENSSLDG00000016868	-	78	79.104	Seriola_lalandi_dorsalis
ENSLBEG00000015294	-	75	85.027	ENSSARG00000010949	-	63	82.888	Sorex_araneus
ENSLBEG00000015294	-	98	84.337	ENSSPUG00000000804	-	96	82.383	Sphenodon_punctatus
ENSLBEG00000015294	-	80	85.646	ENSSPAG00000014152	-	81	83.254	Stegastes_partitus
ENSLBEG00000015294	-	79	82.143	ENSSPAG00000022562	-	78	81.122	Stegastes_partitus
ENSLBEG00000015294	-	98	83.133	ENSSSCG00000017626	-	79	84.500	Sus_scrofa
ENSLBEG00000015294	-	55	91.176	ENSTGUG00000008416	-	72	89.706	Taeniopygia_guttata
ENSLBEG00000015294	-	79	81.122	ENSTRUG00000003691	srsf1a	78	79.592	Takifugu_rubripes
ENSLBEG00000015294	-	79	81.122	ENSTNIG00000016223	srsf1a	77	79.592	Tetraodon_nigroviridis
ENSLBEG00000015294	-	75	83.422	ENSTBEG00000015378	-	63	82.353	Tupaia_belangeri
ENSLBEG00000015294	-	54	88.889	ENSTTRG00000007310	SRSF1	72	87.407	Tursiops_truncatus
ENSLBEG00000015294	-	80	85.500	ENSUAMG00000009858	SRSF1	79	84.500	Ursus_americanus
ENSLBEG00000015294	-	98	83.133	ENSUMAG00000000455	-	78	84.500	Ursus_maritimus
ENSLBEG00000015294	-	80	85.000	ENSVPAG00000010094	SRSF1	79	84.000	Vicugna_pacos
ENSLBEG00000015294	-	98	83.133	ENSVVUG00000011882	-	78	84.500	Vulpes_vulpes
ENSLBEG00000015294	-	80	82.500	ENSXETG00000008954	srsf1	81	79.167	Xenopus_tropicalis
ENSLBEG00000015294	-	79	81.633	ENSXMAG00000011766	srsf1a	78	80.102	Xiphophorus_maculatus