EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000015335 (Gene tree)
Gene ID: 109990768
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 12624 bases
Position: chrFKLU01000189.1:538862-551485
Accession: 109990768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000020060	NUC173	PF08161.12	4.5e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000021133	-	3750	XM_020642973	ENSLBEP00000020060	1249 (aa)	XP_020498629	-

Gene Model

Click here to download ENSLBEG00000015335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000015335's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000015335	rrp12	92	73.684	ENSG00000052749	RRP12	100	75.000	Homo_sapiens
ENSLBEG00000015335	rrp12	99	83.658	ENSAPOG00000013355	rrp12	99	83.696	Acanthochromis_polyacanthus
ENSLBEG00000015335	rrp12	99	60.522	ENSAMEG00000000134	RRP12	99	60.662	Ailuropoda_melanoleuca
ENSLBEG00000015335	rrp12	99	83.242	ENSACIG00000022673	rrp12	99	83.891	Amphilophus_citrinellus
ENSLBEG00000015335	rrp12	99	84.453	ENSAOCG00000016149	rrp12	99	84.317	Amphiprion_ocellaris
ENSLBEG00000015335	rrp12	99	84.363	ENSAPEG00000016023	rrp12	99	84.227	Amphiprion_percula
ENSLBEG00000015335	rrp12	99	84.321	ENSATEG00000022627	rrp12	99	84.109	Anabas_testudineus
ENSLBEG00000015335	rrp12	96	59.167	ENSAPLG00000014387	RRP12	99	58.894	Anas_platyrhynchos
ENSLBEG00000015335	rrp12	99	57.220	ENSACAG00000002175	RRP12	99	57.903	Anolis_carolinensis
ENSLBEG00000015335	rrp12	92	74.342	ENSANAG00000037485	RRP12	99	74.342	Aotus_nancymaae
ENSLBEG00000015335	rrp12	99	83.530	ENSACLG00000007354	rrp12	99	83.399	Astatotilapia_calliptera
ENSLBEG00000015335	rrp12	100	72.390	ENSAMXG00000012852	rrp12	100	72.304	Astyanax_mexicanus
ENSLBEG00000015335	rrp12	99	60.200	ENSBTAG00000002191	RRP12	99	60.524	Bos_taurus
ENSLBEG00000015335	rrp12	84	57.871	ENSCJAG00000016549	-	99	57.895	Callithrix_jacchus
ENSLBEG00000015335	rrp12	99	60.108	ENSCAFG00000009043	RRP12	99	60.354	Canis_familiaris
ENSLBEG00000015335	rrp12	99	60.108	ENSCAFG00020005991	RRP12	99	60.354	Canis_lupus_dingo
ENSLBEG00000015335	rrp12	99	58.594	ENSCHIG00000011876	RRP12	99	58.365	Capra_hircus
ENSLBEG00000015335	rrp12	53	53.247	ENSTSYG00000030210	-	99	53.592	Carlito_syrichta
ENSLBEG00000015335	rrp12	96	56.322	ENSCAPG00000008991	RRP12	98	56.568	Cavia_aperea
ENSLBEG00000015335	rrp12	99	60.093	ENSCPOG00000004215	RRP12	99	60.031	Cavia_porcellus
ENSLBEG00000015335	rrp12	70	55.226	ENSCCAG00000033123	-	82	55.203	Cebus_capucinus
ENSLBEG00000015335	rrp12	79	63.556	ENSCCAG00000024088	RRP12	99	66.412	Cebus_capucinus
ENSLBEG00000015335	rrp12	99	57.728	ENSCATG00000045310	RRP12	99	57.927	Cercocebus_atys
ENSLBEG00000015335	rrp12	99	60.154	ENSCLAG00000003753	RRP12	99	60.015	Chinchilla_lanigera
ENSLBEG00000015335	rrp12	88	58.573	ENSCSAG00000005877	RRP12	99	58.624	Chlorocebus_sabaeus
ENSLBEG00000015335	rrp12	55	68.053	ENSCHOG00000003095	-	57	68.053	Choloepus_hoffmanni
ENSLBEG00000015335	rrp12	94	62.438	ENSCPBG00000011935	RRP12	97	62.325	Chrysemys_picta_bellii
ENSLBEG00000015335	rrp12	64	39.471	ENSCSAVG00000006059	-	99	38.869	Ciona_savignyi
ENSLBEG00000015335	rrp12	92	74.342	ENSCANG00000031653	RRP12	99	74.342	Colobus_angolensis_palliatus
ENSLBEG00000015335	rrp12	90	60.616	ENSCGRG00001004338	Rrp12	99	60.616	Cricetulus_griseus_chok1gshd
ENSLBEG00000015335	rrp12	99	60.496	ENSCGRG00000011965	Rrp12	99	60.496	Cricetulus_griseus_crigri
ENSLBEG00000015335	rrp12	100	80.108	ENSCSEG00000007799	rrp12	100	80.713	Cynoglossus_semilaevis
ENSLBEG00000015335	rrp12	99	81.953	ENSCVAG00000003418	rrp12	99	81.289	Cyprinodon_variegatus
ENSLBEG00000015335	rrp12	100	69.505	ENSDARG00000022410	rrp12	100	69.852	Danio_rerio
ENSLBEG00000015335	rrp12	99	60.555	ENSDNOG00000005120	RRP12	99	60.709	Dasypus_novemcinctus
ENSLBEG00000015335	rrp12	99	60.261	ENSDORG00000009199	Rrp12	99	60.944	Dipodomys_ordii
ENSLBEG00000015335	rrp12	92	56.818	ENSETEG00000002455	RRP12	92	65.753	Echinops_telfairi
ENSLBEG00000015335	rrp12	86	67.188	ENSEBUG00000006555	rrp12	99	58.667	Eptatretus_burgeri
ENSLBEG00000015335	rrp12	99	60.309	ENSEASG00005008693	RRP12	99	60.541	Equus_asinus_asinus
ENSLBEG00000015335	rrp12	94	59.901	ENSECAG00000010892	RRP12	99	60.148	Equus_caballus
ENSLBEG00000015335	rrp12	56	54.412	ENSEEUG00000005447	-	63	54.412	Erinaceus_europaeus
ENSLBEG00000015335	rrp12	99	75.485	ENSELUG00000010510	rrp12	100	74.915	Esox_lucius
ENSLBEG00000015335	rrp12	92	74.342	ENSFCAG00000028639	RRP12	99	60.632	Felis_catus
ENSLBEG00000015335	rrp12	93	60.626	ENSFALG00000008458	RRP12	99	61.322	Ficedula_albicollis
ENSLBEG00000015335	rrp12	99	60.031	ENSFDAG00000019108	RRP12	95	60.108	Fukomys_damarensis
ENSLBEG00000015335	rrp12	99	75.000	ENSFHEG00000004148	rrp12	99	73.981	Fundulus_heteroclitus
ENSLBEG00000015335	rrp12	99	70.918	ENSGMOG00000004188	rrp12	99	70.840	Gadus_morhua
ENSLBEG00000015335	rrp12	99	61.783	ENSGALG00000041331	RRP12	96	62.543	Gallus_gallus
ENSLBEG00000015335	rrp12	99	81.030	ENSGAFG00000009038	rrp12	99	80.683	Gambusia_affinis
ENSLBEG00000015335	rrp12	99	82.081	ENSGACG00000007175	rrp12	99	81.960	Gasterosteus_aculeatus
ENSLBEG00000015335	rrp12	68	65.398	ENSGAGG00000019169	RRP12	96	65.398	Gopherus_agassizii
ENSLBEG00000015335	rrp12	92	73.684	ENSGGOG00000014850	RRP12	99	60.863	Gorilla_gorilla
ENSLBEG00000015335	rrp12	99	82.555	ENSHBUG00000023527	rrp12	99	83.139	Haplochromis_burtoni
ENSLBEG00000015335	rrp12	99	60.449	ENSHGLG00000016772	RRP12	99	60.728	Heterocephalus_glaber_female
ENSLBEG00000015335	rrp12	99	60.449	ENSHGLG00100015110	RRP12	99	60.728	Heterocephalus_glaber_male
ENSLBEG00000015335	rrp12	100	80.769	ENSHCOG00000019519	rrp12	100	80.612	Hippocampus_comes
ENSLBEG00000015335	rrp12	100	71.285	ENSIPUG00000000311	RRP12	100	71.517	Ictalurus_punctatus
ENSLBEG00000015335	rrp12	99	61.728	ENSSTOG00000006515	RRP12	99	61.425	Ictidomys_tridecemlineatus
ENSLBEG00000015335	rrp12	96	60.383	ENSJJAG00000000110	Rrp12	99	59.952	Jaculus_jaculus
ENSLBEG00000015335	rrp12	99	83.017	ENSKMAG00000020621	rrp12	99	82.810	Kryptolebias_marmoratus
ENSLBEG00000015335	rrp12	73	64.045	ENSLACG00000016633	RRP12	82	64.045	Latimeria_chalumnae
ENSLBEG00000015335	rrp12	100	68.136	ENSLOCG00000003846	rrp12	100	68.087	Lepisosteus_oculatus
ENSLBEG00000015335	rrp12	99	60.846	ENSLAFG00000015965	RRP12	99	60.585	Loxodonta_africana
ENSLBEG00000015335	rrp12	92	73.684	ENSMFAG00000041558	RRP12	99	73.684	Macaca_fascicularis
ENSLBEG00000015335	rrp12	92	73.684	ENSMMUG00000019634	RRP12	99	73.684	Macaca_mulatta
ENSLBEG00000015335	rrp12	92	73.684	ENSMNEG00000036759	RRP12	99	73.684	Macaca_nemestrina
ENSLBEG00000015335	rrp12	92	74.342	ENSMLEG00000041317	RRP12	99	74.342	Mandrillus_leucophaeus
ENSLBEG00000015335	rrp12	99	84.518	ENSMAMG00000002964	rrp12	99	83.987	Mastacembelus_armatus
ENSLBEG00000015335	rrp12	99	82.670	ENSMZEG00005003241	rrp12	99	82.984	Maylandia_zebra
ENSLBEG00000015335	rrp12	99	60.386	ENSMGAG00000009829	RRP12	99	60.031	Meleagris_gallopavo
ENSLBEG00000015335	rrp12	99	58.449	ENSMAUG00000020743	Rrp12	99	58.372	Mesocricetus_auratus
ENSLBEG00000015335	rrp12	99	60.940	ENSMICG00000007624	RRP12	99	60.910	Microcebus_murinus
ENSLBEG00000015335	rrp12	99	61.128	ENSMOCG00000006753	Rrp12	99	60.974	Microtus_ochrogaster
ENSLBEG00000015335	rrp12	99	83.202	ENSMMOG00000010708	rrp12	99	83.202	Mola_mola
ENSLBEG00000015335	rrp12	99	60.957	ENSMODG00000004315	RRP12	99	61.283	Monodelphis_domestica
ENSLBEG00000015335	rrp12	99	80.095	ENSMALG00000016560	rrp12	98	84.622	Monopterus_albus
ENSLBEG00000015335	rrp12	99	60.873	MGP_CAROLIEiJ_G0022957	Rrp12	99	60.643	Mus_caroli
ENSLBEG00000015335	rrp12	99	61.592	ENSMUSG00000035049	Rrp12	99	61.360	Mus_musculus
ENSLBEG00000015335	rrp12	99	61.669	MGP_PahariEiJ_G0014447	Rrp12	99	61.437	Mus_pahari
ENSLBEG00000015335	rrp12	99	61.824	MGP_SPRETEiJ_G0023878	Rrp12	99	61.592	Mus_spretus
ENSLBEG00000015335	rrp12	99	59.847	ENSMPUG00000017046	RRP12	99	59.985	Mustela_putorius_furo
ENSLBEG00000015335	rrp12	99	60.169	ENSMLUG00000017160	RRP12	99	60.169	Myotis_lucifugus
ENSLBEG00000015335	rrp12	99	61.300	ENSNGAG00000024144	Rrp12	99	61.330	Nannospalax_galili
ENSLBEG00000015335	rrp12	99	83.902	ENSNBRG00000009987	rrp12	99	83.767	Neolamprologus_brichardi
ENSLBEG00000015335	rrp12	92	74.342	ENSNLEG00000013762	RRP12	99	54.073	Nomascus_leucogenys
ENSLBEG00000015335	rrp12	99	55.693	ENSMEUG00000003185	RRP12	99	56.323	Notamacropus_eugenii
ENSLBEG00000015335	rrp12	89	70.732	ENSOPRG00000005001	RRP12	89	70.732	Ochotona_princeps
ENSLBEG00000015335	rrp12	99	60.717	ENSODEG00000016439	RRP12	99	60.422	Octodon_degus
ENSLBEG00000015335	rrp12	99	82.931	ENSONIG00000009528	rrp12	99	83.528	Oreochromis_niloticus
ENSLBEG00000015335	rrp12	99	57.000	ENSOANG00000006560	RRP12	99	57.011	Ornithorhynchus_anatinus
ENSLBEG00000015335	rrp12	99	61.038	ENSOCUG00000005662	RRP12	99	61.008	Oryctolagus_cuniculus
ENSLBEG00000015335	rrp12	99	80.844	ENSORLG00000008688	rrp12	98	82.560	Oryzias_latipes
ENSLBEG00000015335	rrp12	97	80.971	ENSORLG00020002355	rrp12	99	80.971	Oryzias_latipes_hni
ENSLBEG00000015335	rrp12	99	81.314	ENSORLG00015006709	rrp12	99	81.197	Oryzias_latipes_hsok
ENSLBEG00000015335	rrp12	97	81.688	ENSOMEG00000002609	rrp12	99	81.688	Oryzias_melastigma
ENSLBEG00000015335	rrp12	99	59.939	ENSOGAG00000001626	RRP12	99	59.985	Otolemur_garnettii
ENSLBEG00000015335	rrp12	99	59.493	ENSOARG00000009681	RRP12	99	59.553	Ovis_aries
ENSLBEG00000015335	rrp12	92	73.684	ENSPPAG00000043885	RRP12	100	60.015	Pan_paniscus
ENSLBEG00000015335	rrp12	92	75.000	ENSPPRG00000002029	RRP12	99	60.725	Panthera_pardus
ENSLBEG00000015335	rrp12	92	74.342	ENSPTIG00000004428	RRP12	99	57.321	Panthera_tigris_altaica
ENSLBEG00000015335	rrp12	92	73.684	ENSPTRG00000002806	RRP12	100	60.093	Pan_troglodytes
ENSLBEG00000015335	rrp12	92	74.342	ENSPANG00000021360	RRP12	99	74.342	Papio_anubis
ENSLBEG00000015335	rrp12	99	71.175	ENSPKIG00000016516	rrp12	99	70.866	Paramormyrops_kingsleyae
ENSLBEG00000015335	rrp12	99	79.621	ENSPMGG00000020217	rrp12	99	78.964	Periophthalmus_magnuspinnatus
ENSLBEG00000015335	rrp12	99	61.355	ENSPEMG00000008437	Rrp12	99	61.437	Peromyscus_maniculatus_bairdii
ENSLBEG00000015335	rrp12	89	50.545	ENSPMAG00000007493	rrp12	89	50.545	Petromyzon_marinus
ENSLBEG00000015335	rrp12	96	68.652	ENSPCIG00000002157	RRP12	97	68.652	Phascolarctos_cinereus
ENSLBEG00000015335	rrp12	99	81.343	ENSPFOG00000014975	rrp12	99	80.760	Poecilia_formosa
ENSLBEG00000015335	rrp12	99	81.187	ENSPLAG00000009840	rrp12	99	80.605	Poecilia_latipinna
ENSLBEG00000015335	rrp12	99	81.421	ENSPMEG00000021871	rrp12	99	80.838	Poecilia_mexicana
ENSLBEG00000015335	rrp12	99	81.094	ENSPREG00000020950	rrp12	99	80.668	Poecilia_reticulata
ENSLBEG00000015335	rrp12	99	59.462	ENSPPYG00000002528	RRP12	99	59.784	Pongo_abelii
ENSLBEG00000015335	rrp12	94	75.706	ENSPCAG00000008967	RRP12	94	75.706	Procavia_capensis
ENSLBEG00000015335	rrp12	92	75.658	ENSPCOG00000014009	RRP12	99	60.725	Propithecus_coquereli
ENSLBEG00000015335	rrp12	99	58.333	ENSPVAG00000003370	RRP12	99	58.333	Pteropus_vampyrus
ENSLBEG00000015335	rrp12	99	83.924	ENSPNYG00000009451	rrp12	99	83.790	Pundamilia_nyererei
ENSLBEG00000015335	rrp12	100	71.572	ENSPNAG00000007658	rrp12	100	71.484	Pygocentrus_nattereri
ENSLBEG00000015335	rrp12	99	61.437	ENSRNOG00000048495	Rrp12	99	61.206	Rattus_norvegicus
ENSLBEG00000015335	rrp12	92	74.342	ENSRBIG00000021296	RRP12	99	74.342	Rhinopithecus_bieti
ENSLBEG00000015335	rrp12	92	74.342	ENSRROG00000032482	RRP12	99	74.342	Rhinopithecus_roxellana
ENSLBEG00000015335	rrp12	92	73.026	ENSSBOG00000030992	RRP12	100	73.026	Saimiri_boliviensis_boliviensis
ENSLBEG00000015335	rrp12	99	61.425	ENSSHAG00000018275	RRP12	99	61.318	Sarcophilus_harrisii
ENSLBEG00000015335	rrp12	99	72.261	ENSSFOG00015016400	rrp12	99	71.873	Scleropages_formosus
ENSLBEG00000015335	rrp12	99	82.188	ENSSMAG00000004047	rrp12	99	82.609	Scophthalmus_maximus
ENSLBEG00000015335	rrp12	99	85.850	ENSSDUG00000022871	rrp12	99	85.703	Seriola_dumerili
ENSLBEG00000015335	rrp12	99	84.766	ENSSLDG00000003038	rrp12	99	84.627	Seriola_lalandi_dorsalis
ENSLBEG00000015335	rrp12	99	59.119	ENSSPUG00000012221	RRP12	99	59.537	Sphenodon_punctatus
ENSLBEG00000015335	rrp12	99	85.894	ENSSPAG00000002261	rrp12	99	85.748	Stegastes_partitus
ENSLBEG00000015335	rrp12	99	60.185	ENSSSCG00000010514	RRP12	99	60.000	Sus_scrofa
ENSLBEG00000015335	rrp12	88	58.065	ENSTGUG00000009711	RRP12	99	58.079	Taeniopygia_guttata
ENSLBEG00000015335	rrp12	99	77.308	ENSTRUG00000012017	rrp12	99	77.056	Takifugu_rubripes
ENSLBEG00000015335	rrp12	100	81.041	ENSTNIG00000016522	rrp12	100	81.041	Tetraodon_nigroviridis
ENSLBEG00000015335	rrp12	78	75.490	ENSTBEG00000004907	RRP12	80	75.490	Tupaia_belangeri
ENSLBEG00000015335	rrp12	99	58.559	ENSTTRG00000009878	RRP12	99	58.559	Tursiops_truncatus
ENSLBEG00000015335	rrp12	99	60.585	ENSUAMG00000009092	RRP12	99	60.853	Ursus_americanus
ENSLBEG00000015335	rrp12	99	59.056	ENSUMAG00000021621	RRP12	99	59.302	Ursus_maritimus
ENSLBEG00000015335	rrp12	99	60.154	ENSVVUG00000023168	RRP12	100	60.309	Vulpes_vulpes
ENSLBEG00000015335	rrp12	99	63.341	ENSXETG00000003430	rrp12	99	63.207	Xenopus_tropicalis
ENSLBEG00000015335	rrp12	91	82.131	ENSXCOG00000012082	rrp12	99	78.698	Xiphophorus_couchianus
ENSLBEG00000015335	rrp12	99	81.187	ENSXMAG00000013498	rrp12	99	80.915	Xiphophorus_maculatus