EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000015349 (Gene tree)
Gene ID: 109984289
Gene Symbol: ptcd3
Alias: fa08d08|wu:fa08d08|zgc:123014
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 10819 bases
Position: chrFKLU01000068.1:1026281-1037099
Accession: 109984289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000019961	PPR	PF01535.20	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000021034	-	2298	XM_020634381	ENSLBEP00000019961	666 (aa)	XP_020490037	UPI0009B4C4FA

Gene Model

Click here to download ENSLBEG00000015349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000015349's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000015349	ptcd3	90	72.683	ENSACIG00000022263	ptcd3	100	72.683	Amphilophus_citrinellus
ENSLBEG00000015349	ptcd3	99	71.386	ENSAOCG00000017186	ptcd3	97	71.386	Amphiprion_ocellaris
ENSLBEG00000015349	ptcd3	99	71.536	ENSAPEG00000016069	ptcd3	97	71.536	Amphiprion_percula
ENSLBEG00000015349	ptcd3	88	45.854	ENSAPLG00000005086	PTCD3	97	45.854	Anas_platyrhynchos
ENSLBEG00000015349	ptcd3	99	75.639	ENSACLG00000020653	ptcd3	99	75.639	Astatotilapia_calliptera
ENSLBEG00000015349	ptcd3	99	56.692	ENSAMXG00000011570	ptcd3	99	56.692	Astyanax_mexicanus
ENSLBEG00000015349	ptcd3	98	70.776	ENSCVAG00000020820	ptcd3	99	70.376	Cyprinodon_variegatus
ENSLBEG00000015349	ptcd3	85	67.018	ENSGAFG00000015291	ptcd3	94	67.193	Gambusia_affinis
ENSLBEG00000015349	ptcd3	99	75.940	ENSHBUG00000020056	ptcd3	99	75.940	Haplochromis_burtoni
ENSLBEG00000015349	ptcd3	99	75.639	ENSMZEG00005004980	ptcd3	99	75.639	Maylandia_zebra
ENSLBEG00000015349	ptcd3	91	43.464	ENSMGAG00000013124	PTCD3	99	43.891	Meleagris_gallopavo
ENSLBEG00000015349	ptcd3	99	73.123	ENSMALG00000013282	ptcd3	99	73.123	Monopterus_albus
ENSLBEG00000015349	ptcd3	90	71.739	ENSNBRG00000000447	ptcd3	100	71.739	Neolamprologus_brichardi
ENSLBEG00000015349	ptcd3	99	75.789	ENSONIG00000015886	ptcd3	99	75.789	Oreochromis_niloticus
ENSLBEG00000015349	ptcd3	99	70.721	ENSORLG00000008776	ptcd3	100	71.407	Oryzias_latipes
ENSLBEG00000015349	ptcd3	99	70.420	ENSORLG00020020676	ptcd3	99	70.871	Oryzias_latipes_hni
ENSLBEG00000015349	ptcd3	87	56.931	ENSORLG00015015978	ptcd3	99	57.496	Oryzias_latipes_hsok
ENSLBEG00000015349	ptcd3	98	68.244	ENSPFOG00000004442	ptcd3	100	68.244	Poecilia_formosa
ENSLBEG00000015349	ptcd3	90	67.834	ENSPLAG00000021401	ptcd3	100	67.834	Poecilia_latipinna
ENSLBEG00000015349	ptcd3	88	67.462	ENSPMEG00000007153	ptcd3	100	67.462	Poecilia_mexicana
ENSLBEG00000015349	ptcd3	98	53.134	ENSSFOG00015019643	ptcd3	97	55.537	Scleropages_formosus
ENSLBEG00000015349	ptcd3	80	50.649	ENSTGUG00000010760	PTCD3	100	50.649	Taeniopygia_guttata
ENSLBEG00000015349	ptcd3	99	62.500	ENSTRUG00000003939	ptcd3	99	62.500	Takifugu_rubripes