EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000015401 (Gene tree)
Gene ID: 109984290
Gene Symbol: polr1a
Alias: fa26a03|sb:cb935|wu:fa26a03
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 26944 bases
Position: chrFKLU01000068.1:1037328-1064271
Accession: 109984290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000020161	RNA_pol_Rpb1_5	PF04998.17	5.6e-100	1	1
ENSLBEP00000020161	RNA_pol_Rpb1_4	PF05000.17	7.2e-22	1	1
ENSLBEP00000020161	RNA_pol_Rpb1_2	PF00623.20	6.9e-68	1	1
ENSLBEP00000020161	RNA_pol_Rpb1_3	PF04983.18	3.5e-36	1	1
ENSLBEP00000020161	RNA_pol_Rpb1_1	PF04997.12	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000021243	-	4815	XM_020634382	ENSLBEP00000020161	1604 (aa)	XP_020490038	-

Gene Model

Click here to download ENSLBEG00000015401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000015401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000015401	polr1a	64	32.995	ENSLBEG00000017214	polr3a	69	32.178

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000015401	polr1a	99	68.128	ENSG00000068654	POLR1A	95	68.392	Homo_sapiens
ENSLBEG00000015401	polr1a	66	89.286	ENSAPOG00000017945	polr1a	91	89.286	Acanthochromis_polyacanthus
ENSLBEG00000015401	polr1a	99	68.392	ENSAMEG00000005807	POLR1A	90	76.042	Ailuropoda_melanoleuca
ENSLBEG00000015401	polr1a	100	82.882	ENSACIG00000022147	polr1a	100	82.204	Amphilophus_citrinellus
ENSLBEG00000015401	polr1a	98	87.294	ENSAOCG00000017336	polr1a	100	83.945	Amphiprion_ocellaris
ENSLBEG00000015401	polr1a	98	87.365	ENSAPEG00000016105	polr1a	100	83.933	Amphiprion_percula
ENSLBEG00000015401	polr1a	99	87.974	ENSATEG00000016773	polr1a	94	87.402	Anabas_testudineus
ENSLBEG00000015401	polr1a	87	68.820	ENSAPLG00000013871	POLR1A	96	69.041	Anas_platyrhynchos
ENSLBEG00000015401	polr1a	99	66.920	ENSACAG00000012141	POLR1A	96	66.574	Anolis_carolinensis
ENSLBEG00000015401	polr1a	99	67.388	ENSANAG00000033927	POLR1A	95	67.554	Aotus_nancymaae
ENSLBEG00000015401	polr1a	99	83.250	ENSACLG00000020541	polr1a	100	78.140	Astatotilapia_calliptera
ENSLBEG00000015401	polr1a	99	69.026	ENSBTAG00000006481	POLR1A	95	68.912	Bos_taurus
ENSLBEG00000015401	polr1a	98	41.085	WBGene00012999	rpoa-1	77	58.696	Caenorhabditis_elegans
ENSLBEG00000015401	polr1a	99	67.782	ENSCJAG00000019547	POLR1A	95	67.902	Callithrix_jacchus
ENSLBEG00000015401	polr1a	99	67.992	ENSCAFG00000007613	POLR1A	95	68.912	Canis_familiaris
ENSLBEG00000015401	polr1a	99	67.992	ENSCAFG00020014752	POLR1A	100	64.741	Canis_lupus_dingo
ENSLBEG00000015401	polr1a	99	68.632	ENSCHIG00000018204	POLR1A	94	68.336	Capra_hircus
ENSLBEG00000015401	polr1a	99	68.366	ENSTSYG00000002761	POLR1A	95	68.303	Carlito_syrichta
ENSLBEG00000015401	polr1a	96	64.871	ENSCAPG00000010132	POLR1A	95	65.702	Cavia_aperea
ENSLBEG00000015401	polr1a	99	68.160	ENSCPOG00000012350	POLR1A	94	69.019	Cavia_porcellus
ENSLBEG00000015401	polr1a	99	67.390	ENSCCAG00000019839	POLR1A	95	68.017	Cebus_capucinus
ENSLBEG00000015401	polr1a	99	68.131	ENSCATG00000029786	POLR1A	95	68.579	Cercocebus_atys
ENSLBEG00000015401	polr1a	99	67.737	ENSCLAG00000005187	POLR1A	94	68.329	Chinchilla_lanigera
ENSLBEG00000015401	polr1a	99	68.697	ENSCSAG00000016251	POLR1A	95	68.417	Chlorocebus_sabaeus
ENSLBEG00000015401	polr1a	99	69.474	ENSCPBG00000001115	POLR1A	94	69.366	Chrysemys_picta_bellii
ENSLBEG00000015401	polr1a	94	56.345	ENSCSAVG00000007184	-	89	56.345	Ciona_savignyi
ENSLBEG00000015401	polr1a	99	65.640	ENSCANG00000031785	POLR1A	94	65.360	Colobus_angolensis_palliatus
ENSLBEG00000015401	polr1a	95	77.607	ENSCGRG00001006651	Polr1a	94	77.607	Cricetulus_griseus_chok1gshd
ENSLBEG00000015401	polr1a	64	65.370	ENSCGRG00000010834	Polr1a	100	64.826	Cricetulus_griseus_crigri
ENSLBEG00000015401	polr1a	98	78.883	ENSCSEG00000020190	polr1a	100	75.150	Cynoglossus_semilaevis
ENSLBEG00000015401	polr1a	99	80.956	ENSCVAG00000020941	polr1a	94	81.081	Cyprinodon_variegatus
ENSLBEG00000015401	polr1a	99	75.159	ENSDARG00000098375	polr1a	95	74.735	Danio_rerio
ENSLBEG00000015401	polr1a	96	67.361	ENSDNOG00000010829	POLR1A	91	67.361	Dasypus_novemcinctus
ENSLBEG00000015401	polr1a	99	68.182	ENSDORG00000008298	Polr1a	94	68.732	Dipodomys_ordii
ENSLBEG00000015401	polr1a	69	87.500	ENSETEG00000000412	-	66	87.500	Echinops_telfairi
ENSLBEG00000015401	polr1a	87	49.325	ENSEBUG00000005667	-	91	53.374	Eptatretus_burgeri
ENSLBEG00000015401	polr1a	99	68.597	ENSEASG00005001625	POLR1A	95	68.417	Equus_asinus_asinus
ENSLBEG00000015401	polr1a	94	76.541	ENSECAG00000036306	-	94	76.541	Equus_caballus
ENSLBEG00000015401	polr1a	94	76.541	ENSECAG00000010092	POLR1A	94	76.541	Equus_caballus
ENSLBEG00000015401	polr1a	94	76.541	ENSECAG00000030510	-	94	76.541	Equus_caballus
ENSLBEG00000015401	polr1a	84	77.328	ENSEEUG00000000676	POLR1A	79	78.249	Erinaceus_europaeus
ENSLBEG00000015401	polr1a	99	76.803	ENSELUG00000012769	polr1a	93	76.929	Esox_lucius
ENSLBEG00000015401	polr1a	99	68.724	ENSFCAG00000008966	POLR1A	95	68.724	Felis_catus
ENSLBEG00000015401	polr1a	98	67.296	ENSFALG00000010082	POLR1A	94	68.776	Ficedula_albicollis
ENSLBEG00000015401	polr1a	99	67.715	ENSFDAG00000013726	POLR1A	94	68.239	Fukomys_damarensis
ENSLBEG00000015401	polr1a	100	74.804	ENSFHEG00000005996	polr1a	100	74.294	Fundulus_heteroclitus
ENSLBEG00000015401	polr1a	100	69.541	ENSGMOG00000002230	polr1a	100	69.419	Gadus_morhua
ENSLBEG00000015401	polr1a	88	67.578	ENSGALG00000038160	-	92	67.578	Gallus_gallus
ENSLBEG00000015401	polr1a	99	82.904	ENSGAFG00000015266	polr1a	94	82.976	Gambusia_affinis
ENSLBEG00000015401	polr1a	99	82.667	ENSGACG00000018791	polr1a	94	82.673	Gasterosteus_aculeatus
ENSLBEG00000015401	polr1a	87	69.915	ENSGAGG00000004984	-	92	69.809	Gopherus_agassizii
ENSLBEG00000015401	polr1a	99	68.128	ENSGGOG00000001788	POLR1A	95	68.392	Gorilla_gorilla
ENSLBEG00000015401	polr1a	90	82.292	ENSHBUG00000020021	polr1a	97	87.200	Haplochromis_burtoni
ENSLBEG00000015401	polr1a	99	67.989	ENSHGLG00000006334	POLR1A	94	69.111	Heterocephalus_glaber_female
ENSLBEG00000015401	polr1a	99	67.753	ENSHGLG00100006614	POLR1A	94	68.869	Heterocephalus_glaber_male
ENSLBEG00000015401	polr1a	100	78.385	ENSHCOG00000003345	polr1a	100	78.446	Hippocampus_comes
ENSLBEG00000015401	polr1a	99	73.699	ENSIPUG00000013174	polr1a	95	73.371	Ictalurus_punctatus
ENSLBEG00000015401	polr1a	99	67.910	ENSSTOG00000012580	POLR1A	94	67.746	Ictidomys_tridecemlineatus
ENSLBEG00000015401	polr1a	99	67.222	ENSJJAG00000013113	Polr1a	94	68.487	Jaculus_jaculus
ENSLBEG00000015401	polr1a	99	85.735	ENSKMAG00000007399	polr1a	95	85.735	Kryptolebias_marmoratus
ENSLBEG00000015401	polr1a	50	76.575	ENSLACG00000003218	polr1a	89	76.786	Latimeria_chalumnae
ENSLBEG00000015401	polr1a	99	74.066	ENSLOCG00000010881	polr1a	94	74.066	Lepisosteus_oculatus
ENSLBEG00000015401	polr1a	99	68.851	ENSLAFG00000014948	POLR1A	94	68.640	Loxodonta_africana
ENSLBEG00000015401	polr1a	99	67.852	ENSMFAG00000046097	POLR1A	95	68.417	Macaca_fascicularis
ENSLBEG00000015401	polr1a	99	67.713	ENSMMUG00000015815	POLR1A	95	68.277	Macaca_mulatta
ENSLBEG00000015401	polr1a	99	67.852	ENSMNEG00000043313	POLR1A	95	68.347	Macaca_nemestrina
ENSLBEG00000015401	polr1a	99	67.225	ENSMLEG00000042428	POLR1A	95	67.880	Mandrillus_leucophaeus
ENSLBEG00000015401	polr1a	100	80.142	ENSMAMG00000016565	polr1a	100	80.735	Mastacembelus_armatus
ENSLBEG00000015401	polr1a	99	86.523	ENSMZEG00005004915	polr1a	94	86.093	Maylandia_zebra
ENSLBEG00000015401	polr1a	99	65.132	ENSMGAG00000013111	POLR1A	94	66.385	Meleagris_gallopavo
ENSLBEG00000015401	polr1a	87	68.531	ENSMAUG00000008497	Polr1a	90	68.869	Mesocricetus_auratus
ENSLBEG00000015401	polr1a	99	67.986	ENSMICG00000000757	POLR1A	95	68.439	Microcebus_murinus
ENSLBEG00000015401	polr1a	99	69.019	ENSMOCG00000000122	Polr1a	94	69.019	Microtus_ochrogaster
ENSLBEG00000015401	polr1a	99	82.882	ENSMMOG00000010216	polr1a	94	83.000	Mola_mola
ENSLBEG00000015401	polr1a	99	63.643	ENSMODG00000009335	POLR1A	76	69.973	Monodelphis_domestica
ENSLBEG00000015401	polr1a	99	87.009	ENSMALG00000013363	polr1a	100	82.815	Monopterus_albus
ENSLBEG00000015401	polr1a	99	67.983	MGP_CAROLIEiJ_G0028494	Polr1a	94	68.025	Mus_caroli
ENSLBEG00000015401	polr1a	99	68.054	ENSMUSG00000049553	Polr1a	94	68.054	Mus_musculus
ENSLBEG00000015401	polr1a	99	67.810	MGP_PahariEiJ_G0022230	Polr1a	94	68.354	Mus_pahari
ENSLBEG00000015401	polr1a	99	67.012	MGP_SPRETEiJ_G0029499	Polr1a	94	67.495	Mus_spretus
ENSLBEG00000015401	polr1a	99	68.557	ENSMPUG00000009135	POLR1A	95	68.724	Mustela_putorius_furo
ENSLBEG00000015401	polr1a	99	68.531	ENSMLUG00000015723	POLR1A	94	68.185	Myotis_lucifugus
ENSLBEG00000015401	polr1a	99	67.832	ENSNGAG00000017907	Polr1a	94	68.380	Nannospalax_galili
ENSLBEG00000015401	polr1a	99	86.165	ENSNBRG00000000519	polr1a	94	85.806	Neolamprologus_brichardi
ENSLBEG00000015401	polr1a	99	65.974	ENSNLEG00000002264	POLR1A	95	66.226	Nomascus_leucogenys
ENSLBEG00000015401	polr1a	73	83.465	ENSMEUG00000011665	-	70	83.465	Notamacropus_eugenii
ENSLBEG00000015401	polr1a	97	64.342	ENSOPRG00000008269	POLR1A	88	69.149	Ochotona_princeps
ENSLBEG00000015401	polr1a	99	68.296	ENSODEG00000003542	POLR1A	94	68.803	Octodon_degus
ENSLBEG00000015401	polr1a	99	86.131	ENSONIG00000015895	polr1a	94	85.349	Oreochromis_niloticus
ENSLBEG00000015401	polr1a	99	67.221	ENSOCUG00000010138	POLR1A	95	68.248	Oryctolagus_cuniculus
ENSLBEG00000015401	polr1a	99	82.736	ENSORLG00000008753	polr1a	94	82.736	Oryzias_latipes
ENSLBEG00000015401	polr1a	100	76.637	ENSORLG00020020726	polr1a	99	76.517	Oryzias_latipes_hni
ENSLBEG00000015401	polr1a	100	74.849	ENSORLG00015016071	polr1a	99	74.849	Oryzias_latipes_hsok
ENSLBEG00000015401	polr1a	99	68.226	ENSOGAG00000004031	POLR1A	95	67.877	Otolemur_garnettii
ENSLBEG00000015401	polr1a	99	69.021	ENSOARG00000020601	POLR1A	94	68.908	Ovis_aries
ENSLBEG00000015401	polr1a	99	67.989	ENSPPAG00000042450	POLR1A	95	68.252	Pan_paniscus
ENSLBEG00000015401	polr1a	99	68.528	ENSPPRG00000006702	POLR1A	95	68.864	Panthera_pardus
ENSLBEG00000015401	polr1a	99	68.033	ENSPTIG00000018783	POLR1A	95	68.366	Panthera_tigris_altaica
ENSLBEG00000015401	polr1a	99	68.198	ENSPTRG00000012147	POLR1A	95	68.392	Pan_troglodytes
ENSLBEG00000015401	polr1a	99	67.922	ENSPANG00000025908	POLR1A	95	68.369	Papio_anubis
ENSLBEG00000015401	polr1a	98	73.718	ENSPKIG00000005468	polr1a	100	70.269	Paramormyrops_kingsleyae
ENSLBEG00000015401	polr1a	67	66.881	ENSPSIG00000009321	-	99	67.098	Pelodiscus_sinensis
ENSLBEG00000015401	polr1a	51	89.385	ENSPMGG00000009718	polr1a	85	89.385	Periophthalmus_magnuspinnatus
ENSLBEG00000015401	polr1a	99	68.539	ENSPEMG00000022224	Polr1a	94	68.547	Peromyscus_maniculatus_bairdii
ENSLBEG00000015401	polr1a	93	67.463	ENSPCIG00000004222	POLR1A	93	67.313	Phascolarctos_cinereus
ENSLBEG00000015401	polr1a	99	82.219	ENSPFOG00000005025	polr1a	94	82.575	Poecilia_formosa
ENSLBEG00000015401	polr1a	99	82.370	ENSPLAG00000021389	polr1a	94	82.525	Poecilia_latipinna
ENSLBEG00000015401	polr1a	100	76.900	ENSPMEG00000006463	polr1a	100	77.592	Poecilia_mexicana
ENSLBEG00000015401	polr1a	99	82.115	ENSPREG00000002389	polr1a	94	82.244	Poecilia_reticulata
ENSLBEG00000015401	polr1a	98	68.188	ENSPPYG00000012217	POLR1A	94	68.454	Pongo_abelii
ENSLBEG00000015401	polr1a	89	77.273	ENSPCAG00000011582	POLR1A	85	77.273	Procavia_capensis
ENSLBEG00000015401	polr1a	99	68.245	ENSPCOG00000026987	POLR1A	95	68.719	Propithecus_coquereli
ENSLBEG00000015401	polr1a	95	65.791	ENSPVAG00000012674	POLR1A	91	66.447	Pteropus_vampyrus
ENSLBEG00000015401	polr1a	99	86.380	ENSPNYG00000000026	polr1a	94	85.950	Pundamilia_nyererei
ENSLBEG00000015401	polr1a	99	75.477	ENSPNAG00000019223	polr1a	100	72.577	Pygocentrus_nattereri
ENSLBEG00000015401	polr1a	99	68.781	ENSRNOG00000009545	Polr1a	94	68.776	Rattus_norvegicus
ENSLBEG00000015401	polr1a	99	67.758	ENSRBIG00000028335	POLR1A	95	68.392	Rhinopithecus_bieti
ENSLBEG00000015401	polr1a	99	68.252	ENSRROG00000031473	POLR1A	95	68.392	Rhinopithecus_roxellana
ENSLBEG00000015401	polr1a	95	43.077	YOR341W	RPA190	86	43.077	Saccharomyces_cerevisiae
ENSLBEG00000015401	polr1a	99	67.997	ENSSBOG00000030262	POLR1A	95	67.902	Saimiri_boliviensis_boliviensis
ENSLBEG00000015401	polr1a	99	62.404	ENSSHAG00000014739	POLR1A	94	63.191	Sarcophilus_harrisii
ENSLBEG00000015401	polr1a	99	73.479	ENSSFOG00015019716	polr1a	95	72.599	Scleropages_formosus
ENSLBEG00000015401	polr1a	99	86.801	ENSSMAG00000014342	polr1a	100	82.221	Scophthalmus_maximus
ENSLBEG00000015401	polr1a	99	89.158	ENSSDUG00000014631	polr1a	94	89.792	Seriola_dumerili
ENSLBEG00000015401	polr1a	100	86.054	ENSSLDG00000024095	polr1a	100	86.054	Seriola_lalandi_dorsalis
ENSLBEG00000015401	polr1a	68	92.683	ENSSARG00000003136	-	65	92.683	Sorex_araneus
ENSLBEG00000015401	polr1a	94	73.500	ENSSPUG00000004215	POLR1A	93	73.500	Sphenodon_punctatus
ENSLBEG00000015401	polr1a	68	82.731	ENSSPAG00000016341	polr1a	99	81.737	Stegastes_partitus
ENSLBEG00000015401	polr1a	81	70.635	ENSSSCG00000008226	POLR1A	93	70.635	Sus_scrofa
ENSLBEG00000015401	polr1a	97	67.794	ENSTGUG00000010704	POLR1A	94	67.038	Taeniopygia_guttata
ENSLBEG00000015401	polr1a	100	78.166	ENSTRUG00000002210	polr1a	97	77.960	Takifugu_rubripes
ENSLBEG00000015401	polr1a	99	73.932	ENSTNIG00000010116	polr1a	94	73.699	Tetraodon_nigroviridis
ENSLBEG00000015401	polr1a	72	84.071	ENSTBEG00000008646	POLR1A	69	84.071	Tupaia_belangeri
ENSLBEG00000015401	polr1a	99	66.035	ENSTTRG00000008597	POLR1A	95	65.965	Tursiops_truncatus
ENSLBEG00000015401	polr1a	73	68.523	ENSUAMG00000012158	-	94	68.270	Ursus_americanus
ENSLBEG00000015401	polr1a	99	68.491	ENSUMAG00000006700	POLR1A	100	65.241	Ursus_maritimus
ENSLBEG00000015401	polr1a	99	67.782	ENSVVUG00000001245	POLR1A	95	68.772	Vulpes_vulpes
ENSLBEG00000015401	polr1a	96	68.966	ENSXETG00000001952	polr1a	93	66.843	Xenopus_tropicalis
ENSLBEG00000015401	polr1a	99	82.575	ENSXMAG00000004032	polr1a	94	82.680	Xiphophorus_maculatus