EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000015647 (Gene tree)
Gene ID: 110000067
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 4880 bases
Position: chrFKLU01000629.1:184850-189729
Accession: 110000067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000020349	Gar1	PF04410.14	2.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000021455	-	1935	XM_020655245	ENSLBEP00000020349	275 (aa)	XP_020510901	UPI0009B3DF64

Gene Model

Click here to download ENSLBEG00000015647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000015647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000015647	gar1	55	91.150	ENSBTAG00000000748	GAR1	51	92.523	Bos_taurus
ENSLBEG00000015647	gar1	64	78.906	ENSCPBG00000004310	GAR1	54	90.566	Chrysemys_picta_bellii
ENSLBEG00000015647	gar1	76	76.730	ENSDORG00000000482	Gar1	86	79.054	Dipodomys_ordii
ENSLBEG00000015647	gar1	64	78.125	ENSGAGG00000004393	GAR1	53	91.346	Gopherus_agassizii
ENSLBEG00000015647	gar1	73	76.282	ENSHGLG00000000493	GAR1	89	79.054	Heterocephalus_glaber_female
ENSLBEG00000015647	gar1	60	80.000	ENSLACG00000003306	GAR1	64	86.792	Latimeria_chalumnae
ENSLBEG00000015647	gar1	75	86.275	ENSMALG00000009672	gar1	50	92.593	Monopterus_albus
ENSLBEG00000015647	gar1	67	88.806	ENSORLG00015017643	gar1	58	97.368	Oryzias_latipes_hsok
ENSLBEG00000015647	gar1	52	91.150	ENSOGAG00000004693	GAR1	74	79.054	Otolemur_garnettii
ENSLBEG00000015647	gar1	51	65.957	ENSPTRG00000049340	-	51	75.701	Pan_troglodytes
ENSLBEG00000015647	gar1	59	70.073	ENSRBIG00000042411	-	76	73.043	Rhinopithecus_bieti
ENSLBEG00000015647	gar1	53	79.310	ENSSPUG00000008707	GAR1	59	93.396	Sphenodon_punctatus
ENSLBEG00000015647	gar1	63	92.571	ENSTNIG00000013023	gar1	61	98.148	Tetraodon_nigroviridis