EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000015762 (Gene tree)
Gene ID: 109998616
Gene Symbol: cpsf6
Alias: wu:fa22f12|zgc:85819
Full Name: cleavage and polyadenylation specific factor 6
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 19839 bases
Position: chrFKLU01000012.1:1249270-1269108
Accession: 109998616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000020471	RRM_1	PF00076.22	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000021592	-	4819	XM_020653539	ENSLBEP00000020471	592 (aa)	XP_020509195	UPI0009B37636

Gene Model

Click here to download ENSLBEG00000015762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000015762's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000015762	cpsf6	53	38.889	ENSLBEG00000000947	CPSF7	60	49.550

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000015762	cpsf6	77	81.992	ENSG00000111605	CPSF6	88	80.851	Homo_sapiens
ENSLBEG00000015762	cpsf6	61	49.223	ENSG00000149532	CPSF7	100	49.333	Homo_sapiens
ENSLBEG00000015762	cpsf6	60	49.741	ENSAMEG00000016595	CPSF7	64	51.955	Ailuropoda_melanoleuca
ENSLBEG00000015762	cpsf6	54	38.854	ENSAOCG00000012357	CPSF7	56	53.153	Amphiprion_ocellaris
ENSLBEG00000015762	cpsf6	100	89.731	ENSAOCG00000017865	cpsf6	100	89.731	Amphiprion_ocellaris
ENSLBEG00000015762	cpsf6	70	37.696	ENSAPEG00000015375	CPSF7	56	53.153	Amphiprion_percula
ENSLBEG00000015762	cpsf6	72	81.818	ENSANAG00000019240	CPSF6	90	81.818	Aotus_nancymaae
ENSLBEG00000015762	cpsf6	60	45.251	ENSANAG00000024635	CPSF7	76	45.355	Aotus_nancymaae
ENSLBEG00000015762	cpsf6	95	88.632	ENSACLG00000026325	cpsf6	95	90.764	Astatotilapia_calliptera
ENSLBEG00000015762	cpsf6	58	91.667	ENSAMXG00000016745	CPSF6	75	91.011	Astyanax_mexicanus
ENSLBEG00000015762	cpsf6	61	49.741	ENSBTAG00000015263	CPSF7	77	50.282	Bos_taurus
ENSLBEG00000015762	cpsf6	61	49.223	ENSCJAG00000019282	CPSF7	80	62.500	Callithrix_jacchus
ENSLBEG00000015762	cpsf6	61	49.741	ENSCAFG00000016152	CPSF7	77	50.847	Canis_familiaris
ENSLBEG00000015762	cpsf6	69	82.468	ENSCAFG00000000424	CPSF6	77	78.161	Canis_familiaris
ENSLBEG00000015762	cpsf6	61	49.741	ENSCAFG00020012753	CPSF7	77	50.847	Canis_lupus_dingo
ENSLBEG00000015762	cpsf6	61	49.741	ENSCHIG00000014655	CPSF7	77	50.282	Capra_hircus
ENSLBEG00000015762	cpsf6	76	82.490	ENSTSYG00000008591	CPSF6	93	82.677	Carlito_syrichta
ENSLBEG00000015762	cpsf6	61	49.741	ENSTSYG00000010138	-	77	50.847	Carlito_syrichta
ENSLBEG00000015762	cpsf6	54	58.741	ENSCPOG00000009980	CPSF7	77	50.276	Cavia_porcellus
ENSLBEG00000015762	cpsf6	61	49.223	ENSCCAG00000032367	CPSF7	77	50.282	Cebus_capucinus
ENSLBEG00000015762	cpsf6	72	83.908	ENSCATG00000039288	CPSF6	93	82.353	Cercocebus_atys
ENSLBEG00000015762	cpsf6	61	49.223	ENSCATG00000042801	CPSF7	77	50.282	Cercocebus_atys
ENSLBEG00000015762	cpsf6	54	58.741	ENSCLAG00000003174	CPSF7	77	49.724	Chinchilla_lanigera
ENSLBEG00000015762	cpsf6	60	49.223	ENSCSAG00000006414	CPSF7	77	50.282	Chlorocebus_sabaeus
ENSLBEG00000015762	cpsf6	69	82.803	ENSCANG00000037294	CPSF6	91	82.353	Colobus_angolensis_palliatus
ENSLBEG00000015762	cpsf6	61	50.259	ENSCGRG00001020382	Cpsf7	77	50.829	Cricetulus_griseus_chok1gshd
ENSLBEG00000015762	cpsf6	61	50.259	ENSCGRG00000017954	Cpsf7	77	50.829	Cricetulus_griseus_crigri
ENSLBEG00000015762	cpsf6	95	92.718	ENSCSEG00000008967	cpsf6	95	88.988	Cynoglossus_semilaevis
ENSLBEG00000015762	cpsf6	50	40.206	ENSCSEG00000001956	CPSF7	57	45.455	Cynoglossus_semilaevis
ENSLBEG00000015762	cpsf6	95	88.455	ENSCVAG00000014857	cpsf6	95	84.547	Cyprinodon_variegatus
ENSLBEG00000015762	cpsf6	77	36.199	ENSCVAG00000007392	CPSF7	68	42.949	Cyprinodon_variegatus
ENSLBEG00000015762	cpsf6	61	49.741	ENSDNOG00000018517	CPSF7	80	63.333	Dasypus_novemcinctus
ENSLBEG00000015762	cpsf6	66	79.111	ENSETEG00000002097	CPSF6	62	79.227	Echinops_telfairi
ENSLBEG00000015762	cpsf6	61	49.741	ENSETEG00000003765	CPSF7	69	62.500	Echinops_telfairi
ENSLBEG00000015762	cpsf6	95	58.576	ENSEBUG00000003540	cpsf6	67	76.786	Eptatretus_burgeri
ENSLBEG00000015762	cpsf6	55	58.904	ENSEASG00005008196	CPSF7	77	50.847	Equus_asinus_asinus
ENSLBEG00000015762	cpsf6	61	49.741	ENSFCAG00000013677	CPSF7	80	63.333	Felis_catus
ENSLBEG00000015762	cpsf6	91	48.319	ENSFALG00000011927	CPSF7	76	56.069	Ficedula_albicollis
ENSLBEG00000015762	cpsf6	61	50.259	ENSFDAG00000003919	CPSF7	77	50.847	Fukomys_damarensis
ENSLBEG00000015762	cpsf6	95	84.906	ENSFHEG00000019693	cpsf6	95	83.733	Fundulus_heteroclitus
ENSLBEG00000015762	cpsf6	55	99.333	ENSGMOG00000012951	cpsf6	59	99.333	Gadus_morhua
ENSLBEG00000015762	cpsf6	58	49.162	ENSGALG00000040962	CPSF7	67	53.757	Gallus_gallus
ENSLBEG00000015762	cpsf6	72	83.908	ENSGGOG00000008211	CPSF6	93	82.353	Gorilla_gorilla
ENSLBEG00000015762	cpsf6	95	88.810	ENSHBUG00000005998	cpsf6	95	90.941	Haplochromis_burtoni
ENSLBEG00000015762	cpsf6	53	58.741	ENSHGLG00000019090	-	77	50.276	Heterocephalus_glaber_female
ENSLBEG00000015762	cpsf6	53	58.741	ENSHGLG00100013933	-	78	50.276	Heterocephalus_glaber_male
ENSLBEG00000015762	cpsf6	95	88.298	ENSHCOG00000014555	cpsf6	95	86.348	Hippocampus_comes
ENSLBEG00000015762	cpsf6	61	49.741	ENSSTOG00000007708	CPSF7	77	50.276	Ictidomys_tridecemlineatus
ENSLBEG00000015762	cpsf6	60	49.741	ENSJJAG00000019390	Cpsf7	77	50.847	Jaculus_jaculus
ENSLBEG00000015762	cpsf6	55	91.489	ENSKMAG00000014794	cpsf6	95	90.925	Kryptolebias_marmoratus
ENSLBEG00000015762	cpsf6	57	44.872	ENSLACG00000005542	CPSF7	69	44.872	Latimeria_chalumnae
ENSLBEG00000015762	cpsf6	66	79.897	ENSLAFG00000030413	CPSF6	82	76.923	Loxodonta_africana
ENSLBEG00000015762	cpsf6	61	49.741	ENSLAFG00000032084	CPSF7	77	50.847	Loxodonta_africana
ENSLBEG00000015762	cpsf6	61	49.223	ENSMFAG00000001401	CPSF7	77	50.282	Macaca_fascicularis
ENSLBEG00000015762	cpsf6	72	83.908	ENSMFAG00000045318	CPSF6	93	82.353	Macaca_fascicularis
ENSLBEG00000015762	cpsf6	61	49.223	ENSMMUG00000015280	CPSF7	77	50.282	Macaca_mulatta
ENSLBEG00000015762	cpsf6	60	49.223	ENSMNEG00000029585	CPSF7	77	50.282	Macaca_nemestrina
ENSLBEG00000015762	cpsf6	72	83.908	ENSMNEG00000036311	CPSF6	93	82.677	Macaca_nemestrina
ENSLBEG00000015762	cpsf6	61	49.223	ENSMLEG00000031269	CPSF7	75	50.282	Mandrillus_leucophaeus
ENSLBEG00000015762	cpsf6	69	82.803	ENSMLEG00000003957	CPSF6	91	82.353	Mandrillus_leucophaeus
ENSLBEG00000015762	cpsf6	100	95.447	ENSMAMG00000010385	cpsf6	100	95.447	Mastacembelus_armatus
ENSLBEG00000015762	cpsf6	95	88.810	ENSMZEG00005007975	cpsf6	95	90.941	Maylandia_zebra
ENSLBEG00000015762	cpsf6	96	38.487	ENSMGAG00000004876	CPSF7	62	58.683	Meleagris_gallopavo
ENSLBEG00000015762	cpsf6	61	49.741	ENSMAUG00000013020	Cpsf7	77	50.276	Mesocricetus_auratus
ENSLBEG00000015762	cpsf6	61	49.741	ENSMICG00000013788	CPSF7	77	50.847	Microcebus_murinus
ENSLBEG00000015762	cpsf6	72	83.908	ENSMICG00000007385	-	93	82.677	Microcebus_murinus
ENSLBEG00000015762	cpsf6	61	49.741	ENSMOCG00000000072	Cpsf7	77	50.276	Microtus_ochrogaster
ENSLBEG00000015762	cpsf6	61	51.531	ENSMODG00000020364	CPSF7	69	60.606	Monodelphis_domestica
ENSLBEG00000015762	cpsf6	77	96.875	ENSMALG00000014908	cpsf6	89	96.875	Monopterus_albus
ENSLBEG00000015762	cpsf6	61	49.741	MGP_CAROLIEiJ_G0022690	Cpsf7	77	50.276	Mus_caroli
ENSLBEG00000015762	cpsf6	61	49.741	ENSMUSG00000034820	Cpsf7	77	50.276	Mus_musculus
ENSLBEG00000015762	cpsf6	61	49.741	MGP_PahariEiJ_G0014184	Cpsf7	77	50.276	Mus_pahari
ENSLBEG00000015762	cpsf6	61	49.741	MGP_SPRETEiJ_G0023604	Cpsf7	77	50.276	Mus_spretus
ENSLBEG00000015762	cpsf6	50	58.219	ENSMPUG00000014163	CPSF7	74	49.718	Mustela_putorius_furo
ENSLBEG00000015762	cpsf6	60	78.488	ENSMLUG00000023960	-	81	69.613	Myotis_lucifugus
ENSLBEG00000015762	cpsf6	64	86.957	ENSMLUG00000028728	-	83	85.417	Myotis_lucifugus
ENSLBEG00000015762	cpsf6	60	49.741	ENSMLUG00000013278	CPSF7	77	50.847	Myotis_lucifugus
ENSLBEG00000015762	cpsf6	61	51.295	ENSNGAG00000005031	Cpsf7	77	50.276	Nannospalax_galili
ENSLBEG00000015762	cpsf6	61	49.223	ENSNLEG00000002529	CPSF7	71	50.282	Nomascus_leucogenys
ENSLBEG00000015762	cpsf6	72	83.908	ENSNLEG00000003798	CPSF6	93	82.677	Nomascus_leucogenys
ENSLBEG00000015762	cpsf6	61	53.368	ENSMEUG00000002261	CPSF7	77	51.381	Notamacropus_eugenii
ENSLBEG00000015762	cpsf6	61	48.066	ENSODEG00000002610	CPSF7	78	50.000	Octodon_degus
ENSLBEG00000015762	cpsf6	62	87.952	ENSODEG00000004418	-	80	87.952	Octodon_degus
ENSLBEG00000015762	cpsf6	95	87.744	ENSONIG00000011702	cpsf6	95	89.165	Oreochromis_niloticus
ENSLBEG00000015762	cpsf6	96	37.458	ENSOCUG00000024726	CPSF7	78	49.724	Oryctolagus_cuniculus
ENSLBEG00000015762	cpsf6	61	34.934	ENSORLG00000006495	CPSF7	55	48.649	Oryzias_latipes
ENSLBEG00000015762	cpsf6	61	34.934	ENSORLG00020012657	CPSF7	55	48.649	Oryzias_latipes_hni
ENSLBEG00000015762	cpsf6	64	35.371	ENSOMEG00000000539	CPSF7	61	46.610	Oryzias_melastigma
ENSLBEG00000015762	cpsf6	61	49.741	ENSOGAG00000027958	CPSF7	72	50.847	Otolemur_garnettii
ENSLBEG00000015762	cpsf6	61	49.741	ENSOARG00000012937	CPSF7	65	50.282	Ovis_aries
ENSLBEG00000015762	cpsf6	61	49.223	ENSPPAG00000028232	CPSF7	75	50.282	Pan_paniscus
ENSLBEG00000015762	cpsf6	61	49.741	ENSPPRG00000008538	CPSF7	73	50.847	Panthera_pardus
ENSLBEG00000015762	cpsf6	61	49.741	ENSPTIG00000021699	CPSF7	77	50.847	Panthera_tigris_altaica
ENSLBEG00000015762	cpsf6	72	83.908	ENSPTRG00000005205	CPSF6	93	82.353	Pan_troglodytes
ENSLBEG00000015762	cpsf6	61	49.223	ENSPTRG00000003742	CPSF7	77	50.282	Pan_troglodytes
ENSLBEG00000015762	cpsf6	76	93.443	ENSPANG00000011641	CPSF6	93	82.353	Papio_anubis
ENSLBEG00000015762	cpsf6	61	49.223	ENSPANG00000006037	CPSF7	73	50.282	Papio_anubis
ENSLBEG00000015762	cpsf6	60	42.857	ENSPKIG00000018054	CPSF7	78	48.387	Paramormyrops_kingsleyae
ENSLBEG00000015762	cpsf6	61	49.741	ENSPEMG00000012648	Cpsf7	77	50.276	Peromyscus_maniculatus_bairdii
ENSLBEG00000015762	cpsf6	61	51.531	ENSPCIG00000002551	CPSF7	80	60.150	Phascolarctos_cinereus
ENSLBEG00000015762	cpsf6	95	90.409	ENSPLAG00000005715	cpsf6	95	86.501	Poecilia_latipinna
ENSLBEG00000015762	cpsf6	95	90.409	ENSPMEG00000001353	cpsf6	95	86.501	Poecilia_mexicana
ENSLBEG00000015762	cpsf6	95	90.409	ENSPREG00000004417	cpsf6	95	86.501	Poecilia_reticulata
ENSLBEG00000015762	cpsf6	61	49.223	ENSPPYG00000003188	CPSF7	77	50.282	Pongo_abelii
ENSLBEG00000015762	cpsf6	61	49.741	ENSPCOG00000011976	CPSF7	77	50.847	Propithecus_coquereli
ENSLBEG00000015762	cpsf6	61	49.741	ENSPVAG00000010675	CPSF7	77	50.847	Pteropus_vampyrus
ENSLBEG00000015762	cpsf6	95	88.810	ENSPNYG00000020315	cpsf6	95	90.941	Pundamilia_nyererei
ENSLBEG00000015762	cpsf6	60	49.741	ENSRNOG00000020668	Cpsf7	77	50.276	Rattus_norvegicus
ENSLBEG00000015762	cpsf6	61	49.223	ENSRBIG00000031429	CPSF7	80	62.500	Rhinopithecus_bieti
ENSLBEG00000015762	cpsf6	72	83.908	ENSRBIG00000042827	CPSF6	93	82.353	Rhinopithecus_bieti
ENSLBEG00000015762	cpsf6	61	49.223	ENSRROG00000045009	CPSF7	77	50.282	Rhinopithecus_roxellana
ENSLBEG00000015762	cpsf6	72	83.908	ENSRROG00000042758	CPSF6	93	82.677	Rhinopithecus_roxellana
ENSLBEG00000015762	cpsf6	69	82.803	ENSSBOG00000010652	CPSF6	92	82.353	Saimiri_boliviensis_boliviensis
ENSLBEG00000015762	cpsf6	61	49.223	ENSSBOG00000018431	CPSF7	77	50.282	Saimiri_boliviensis_boliviensis
ENSLBEG00000015762	cpsf6	58	50.777	ENSSHAG00000011964	CPSF7	75	51.381	Sarcophilus_harrisii
ENSLBEG00000015762	cpsf6	73	40.805	ENSSFOG00015010288	cpsf7	68	47.143	Scleropages_formosus
ENSLBEG00000015762	cpsf6	100	95.608	ENSSMAG00000000471	cpsf6	100	95.608	Scophthalmus_maximus
ENSLBEG00000015762	cpsf6	100	96.796	ENSSDUG00000005024	cpsf6	100	96.796	Seriola_dumerili
ENSLBEG00000015762	cpsf6	100	96.796	ENSSLDG00000009042	cpsf6	100	96.796	Seriola_lalandi_dorsalis
ENSLBEG00000015762	cpsf6	80	83.465	ENSSARG00000006743	CPSF6	77	85.771	Sorex_araneus
ENSLBEG00000015762	cpsf6	60	50.256	ENSSPUG00000019344	CPSF7	77	52.841	Sphenodon_punctatus
ENSLBEG00000015762	cpsf6	100	95.455	ENSSPAG00000013906	cpsf6	100	95.455	Stegastes_partitus
ENSLBEG00000015762	cpsf6	61	49.741	ENSSSCG00000013083	CPSF7	80	63.333	Sus_scrofa
ENSLBEG00000015762	cpsf6	58	52.809	ENSTGUG00000006513	CPSF7	71	53.488	Taeniopygia_guttata
ENSLBEG00000015762	cpsf6	56	49.223	ENSTTRG00000011085	CPSF7	75	50.847	Tursiops_truncatus
ENSLBEG00000015762	cpsf6	61	49.741	ENSUAMG00000017809	CPSF7	77	50.847	Ursus_americanus
ENSLBEG00000015762	cpsf6	57	87.879	ENSUMAG00000020779	CPSF6	68	89.091	Ursus_maritimus
ENSLBEG00000015762	cpsf6	60	49.741	ENSUMAG00000011825	CPSF7	77	50.847	Ursus_maritimus
ENSLBEG00000015762	cpsf6	61	49.741	ENSVVUG00000004939	CPSF7	80	63.333	Vulpes_vulpes
ENSLBEG00000015762	cpsf6	97	38.014	ENSXETG00000006715	cpsf7	65	47.727	Xenopus_tropicalis
ENSLBEG00000015762	cpsf6	95	90.231	ENSXMAG00000003459	cpsf6	95	86.323	Xiphophorus_maculatus