EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000015919 (Gene tree)
Gene ID: 109981089
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 4643 bases
Position: chrFKLU01000028.1:2018525-2023167
Accession: 109981089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000020674	RNA_pol_L_2	PF13656.6	2.9e-27	1	1
ENSLBEP00000020674	RNA_pol_L	PF01193.24	6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000021802	-	721	XM_020629732	ENSLBEP00000020674	114 (aa)	XP_020485388	UPI0009B4C711

Gene Model

Click here to download ENSLBEG00000015919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000015919's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000015919	polr1d	94	31.776	ENSLBEG00000005885	polr2j	89	31.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000015919	polr1d	92	72.381	ENSG00000186184	POLR1D	91	72.381	Homo_sapiens
ENSLBEG00000015919	polr1d	91	86.538	ENSAPOG00000021882	polr1d	96	88.235	Acanthochromis_polyacanthus
ENSLBEG00000015919	polr1d	92	73.333	ENSAMEG00000019095	POLR1D	84	73.333	Ailuropoda_melanoleuca
ENSLBEG00000015919	polr1d	100	88.696	ENSACIG00000013328	polr1d	100	88.696	Amphilophus_citrinellus
ENSLBEG00000015919	polr1d	100	85.088	ENSAOCG00000018500	polr1d	100	85.088	Amphiprion_ocellaris
ENSLBEG00000015919	polr1d	100	86.842	ENSAPEG00000009489	polr1d	100	86.842	Amphiprion_percula
ENSLBEG00000015919	polr1d	100	92.982	ENSATEG00000019322	polr1d	100	92.982	Anabas_testudineus
ENSLBEG00000015919	polr1d	97	65.766	ENSACAG00000015753	POLR1D	96	65.766	Anolis_carolinensis
ENSLBEG00000015919	polr1d	92	72.381	ENSANAG00000024486	POLR1D	79	72.381	Aotus_nancymaae
ENSLBEG00000015919	polr1d	100	91.228	ENSACLG00000023805	polr1d	100	91.228	Astatotilapia_calliptera
ENSLBEG00000015919	polr1d	99	76.106	ENSAMXG00000036118	polr1d	98	76.106	Astyanax_mexicanus
ENSLBEG00000015919	polr1d	92	71.429	ENSBTAG00000008642	POLR1D	79	71.429	Bos_taurus
ENSLBEG00000015919	polr1d	92	71.429	ENSBTAG00000033252	-	79	71.429	Bos_taurus
ENSLBEG00000015919	polr1d	70	35.000	WBGene00010230	rpac-19	56	35.000	Caenorhabditis_elegans
ENSLBEG00000015919	polr1d	92	71.429	ENSCJAG00000044669	POLR1D	79	71.429	Callithrix_jacchus
ENSLBEG00000015919	polr1d	92	73.333	ENSCAFG00000006755	POLR1D	79	73.333	Canis_familiaris
ENSLBEG00000015919	polr1d	92	72.381	ENSCHIG00000021910	POLR1D	79	72.381	Capra_hircus
ENSLBEG00000015919	polr1d	91	74.038	ENSTSYG00000026817	-	78	74.038	Carlito_syrichta
ENSLBEG00000015919	polr1d	91	63.208	ENSTSYG00000034852	-	88	63.208	Carlito_syrichta
ENSLBEG00000015919	polr1d	56	57.812	ENSCAPG00000006058	-	65	57.812	Cavia_aperea
ENSLBEG00000015919	polr1d	56	57.812	ENSCPOG00000030450	-	65	57.812	Cavia_porcellus
ENSLBEG00000015919	polr1d	92	73.333	ENSCCAG00000021349	-	79	73.333	Cebus_capucinus
ENSLBEG00000015919	polr1d	92	55.238	ENSCCAG00000020191	-	76	55.238	Cebus_capucinus
ENSLBEG00000015919	polr1d	91	62.500	ENSCATG00000022900	-	77	62.500	Cercocebus_atys
ENSLBEG00000015919	polr1d	92	72.381	ENSCATG00000030710	-	79	72.381	Cercocebus_atys
ENSLBEG00000015919	polr1d	92	70.476	ENSCLAG00000017623	POLR1D	85	70.476	Chinchilla_lanigera
ENSLBEG00000015919	polr1d	89	78.218	ENSCPBG00000004719	POLR1D	100	78.218	Chrysemys_picta_bellii
ENSLBEG00000015919	polr1d	92	72.381	ENSCANG00000028632	-	79	72.381	Colobus_angolensis_palliatus
ENSLBEG00000015919	polr1d	91	72.115	ENSCANG00000037694	-	78	72.115	Colobus_angolensis_palliatus
ENSLBEG00000015919	polr1d	92	71.429	ENSCGRG00001021251	Polr1d	79	71.429	Cricetulus_griseus_chok1gshd
ENSLBEG00000015919	polr1d	92	71.429	ENSCGRG00000011639	Polr1d	79	71.429	Cricetulus_griseus_crigri
ENSLBEG00000015919	polr1d	93	90.566	ENSCSEG00000018268	polr1d	100	85.470	Cynoglossus_semilaevis
ENSLBEG00000015919	polr1d	100	85.088	ENSCVAG00000018527	polr1d	100	85.088	Cyprinodon_variegatus
ENSLBEG00000015919	polr1d	89	77.228	ENSDARG00000037570	polr1d	90	77.228	Danio_rerio
ENSLBEG00000015919	polr1d	92	71.429	ENSDNOG00000043676	-	79	71.429	Dasypus_novemcinctus
ENSLBEG00000015919	polr1d	92	70.476	ENSDNOG00000046247	-	78	70.476	Dasypus_novemcinctus
ENSLBEG00000015919	polr1d	92	70.476	ENSDORG00000029155	Polr1d	79	70.476	Dipodomys_ordii
ENSLBEG00000015919	polr1d	75	49.412	FBgn0086447	l(2)37Cg	80	49.412	Drosophila_melanogaster
ENSLBEG00000015919	polr1d	92	72.381	ENSETEG00000012797	POLR1D	85	72.381	Echinops_telfairi
ENSLBEG00000015919	polr1d	81	65.217	ENSEBUG00000011748	polr1d	64	65.217	Eptatretus_burgeri
ENSLBEG00000015919	polr1d	92	73.333	ENSEASG00005022487	POLR1D	81	73.333	Equus_asinus_asinus
ENSLBEG00000015919	polr1d	92	73.333	ENSEEUG00000013144	POLR1D	85	73.333	Erinaceus_europaeus
ENSLBEG00000015919	polr1d	97	81.250	ENSELUG00000005105	rpac2	98	81.250	Esox_lucius
ENSLBEG00000015919	polr1d	92	73.333	ENSFCAG00000030162	POLR1D	79	73.333	Felis_catus
ENSLBEG00000015919	polr1d	88	74.000	ENSFALG00000011463	POLR1D	99	74.000	Ficedula_albicollis
ENSLBEG00000015919	polr1d	92	69.524	ENSFDAG00000004463	POLR1D	79	69.524	Fukomys_damarensis
ENSLBEG00000015919	polr1d	100	85.088	ENSFHEG00000015410	polr1d	99	85.088	Fundulus_heteroclitus
ENSLBEG00000015919	polr1d	59	64.179	ENSGALG00000007470	POLR1D	66	64.179	Gallus_gallus
ENSLBEG00000015919	polr1d	100	86.842	ENSGAFG00000001693	polr1d	100	86.842	Gambusia_affinis
ENSLBEG00000015919	polr1d	94	93.458	ENSGACG00000018585	polr1d	91	93.458	Gasterosteus_aculeatus
ENSLBEG00000015919	polr1d	100	75.439	ENSGAGG00000008503	POLR1D	100	75.439	Gopherus_agassizii
ENSLBEG00000015919	polr1d	92	72.381	ENSGGOG00000004235	POLR1D	79	72.381	Gorilla_gorilla
ENSLBEG00000015919	polr1d	100	91.228	ENSHBUG00000002111	polr1d	100	91.228	Haplochromis_burtoni
ENSLBEG00000015919	polr1d	92	68.571	ENSHGLG00000003202	POLR1D	79	68.571	Heterocephalus_glaber_female
ENSLBEG00000015919	polr1d	92	68.571	ENSHGLG00100009393	POLR1D	79	68.571	Heterocephalus_glaber_male
ENSLBEG00000015919	polr1d	100	81.579	ENSHCOG00000003258	polr1d	100	81.579	Hippocampus_comes
ENSLBEG00000015919	polr1d	100	78.261	ENSIPUG00000014810	polr1d	100	78.261	Ictalurus_punctatus
ENSLBEG00000015919	polr1d	92	72.381	ENSSTOG00000013877	POLR1D	79	72.381	Ictidomys_tridecemlineatus
ENSLBEG00000015919	polr1d	92	70.476	ENSJJAG00000022671	-	88	70.476	Jaculus_jaculus
ENSLBEG00000015919	polr1d	92	55.238	ENSJJAG00000021667	-	61	55.238	Jaculus_jaculus
ENSLBEG00000015919	polr1d	100	83.333	ENSKMAG00000015256	polr1d	100	83.333	Kryptolebias_marmoratus
ENSLBEG00000015919	polr1d	94	68.519	ENSLACG00000006810	POLR1D	90	68.519	Latimeria_chalumnae
ENSLBEG00000015919	polr1d	62	80.282	ENSLOCG00000014976	polr1d	96	80.282	Lepisosteus_oculatus
ENSLBEG00000015919	polr1d	93	71.698	ENSLAFG00000032290	POLR1D	80	71.698	Loxodonta_africana
ENSLBEG00000015919	polr1d	92	72.381	ENSMFAG00000045264	POLR1D	81	72.381	Macaca_fascicularis
ENSLBEG00000015919	polr1d	92	72.381	ENSMMUG00000020386	POLR1D	91	72.381	Macaca_mulatta
ENSLBEG00000015919	polr1d	69	68.354	ENSMMUG00000041570	-	71	68.354	Macaca_mulatta
ENSLBEG00000015919	polr1d	92	72.381	ENSMNEG00000008630	-	79	72.381	Macaca_nemestrina
ENSLBEG00000015919	polr1d	91	57.692	ENSMNEG00000038120	-	76	57.692	Macaca_nemestrina
ENSLBEG00000015919	polr1d	92	72.381	ENSMLEG00000041048	-	79	72.381	Mandrillus_leucophaeus
ENSLBEG00000015919	polr1d	91	63.462	ENSMLEG00000032251	-	77	63.462	Mandrillus_leucophaeus
ENSLBEG00000015919	polr1d	89	91.176	ENSMAMG00000014834	polr1d	95	91.176	Mastacembelus_armatus
ENSLBEG00000015919	polr1d	89	90.196	ENSMZEG00005006638	polr1d	90	90.196	Maylandia_zebra
ENSLBEG00000015919	polr1d	89	71.845	ENSMGAG00000005322	POLR1D	94	71.845	Meleagris_gallopavo
ENSLBEG00000015919	polr1d	92	71.429	ENSMAUG00000001946	Polr1d	79	71.429	Mesocricetus_auratus
ENSLBEG00000015919	polr1d	92	71.429	ENSMICG00000016883	-	79	71.429	Microcebus_murinus
ENSLBEG00000015919	polr1d	92	57.143	ENSMICG00000007349	-	78	57.143	Microcebus_murinus
ENSLBEG00000015919	polr1d	92	70.476	ENSMOCG00000021288	Polr1d	79	70.476	Microtus_ochrogaster
ENSLBEG00000015919	polr1d	100	88.596	ENSMMOG00000009605	polr1d	100	88.596	Mola_mola
ENSLBEG00000015919	polr1d	100	74.561	ENSMODG00000023881	POLR1D	100	74.561	Monodelphis_domestica
ENSLBEG00000015919	polr1d	100	87.719	ENSMALG00000010652	polr1d	100	87.719	Monopterus_albus
ENSLBEG00000015919	polr1d	91	69.231	MGP_CAROLIEiJ_G0028034	Polr1d	78	69.231	Mus_caroli
ENSLBEG00000015919	polr1d	91	69.231	ENSMUSG00000029642	Polr1d	78	69.231	Mus_musculus
ENSLBEG00000015919	polr1d	91	69.231	MGP_PahariEiJ_G0024600	Polr1d	78	69.231	Mus_pahari
ENSLBEG00000015919	polr1d	91	70.192	MGP_SPRETEiJ_G0029032	Polr1d	78	70.192	Mus_spretus
ENSLBEG00000015919	polr1d	92	66.667	ENSMLUG00000004118	-	79	66.667	Myotis_lucifugus
ENSLBEG00000015919	polr1d	92	72.381	ENSMLUG00000027169	-	79	72.381	Myotis_lucifugus
ENSLBEG00000015919	polr1d	95	70.370	ENSNGAG00000006014	Polr1d	93	70.370	Nannospalax_galili
ENSLBEG00000015919	polr1d	100	91.228	ENSNBRG00000020327	polr1d	100	91.228	Neolamprologus_brichardi
ENSLBEG00000015919	polr1d	92	72.381	ENSNLEG00000000358	POLR1D	79	72.381	Nomascus_leucogenys
ENSLBEG00000015919	polr1d	92	70.476	ENSODEG00000005294	-	79	70.476	Octodon_degus
ENSLBEG00000015919	polr1d	92	59.048	ENSODEG00000014801	-	76	59.048	Octodon_degus
ENSLBEG00000015919	polr1d	94	77.570	ENSOANG00000008708	-	99	77.570	Ornithorhynchus_anatinus
ENSLBEG00000015919	polr1d	92	72.381	ENSOCUG00000015706	POLR1D	64	72.381	Oryctolagus_cuniculus
ENSLBEG00000015919	polr1d	100	81.579	ENSORLG00000010257	polr1d	100	81.579	Oryzias_latipes
ENSLBEG00000015919	polr1d	100	81.579	ENSORLG00020000533	polr1d	77	81.579	Oryzias_latipes_hni
ENSLBEG00000015919	polr1d	100	80.702	ENSORLG00015013267	polr1d	75	80.702	Oryzias_latipes_hsok
ENSLBEG00000015919	polr1d	100	79.825	ENSOMEG00000014912	polr1d	76	79.825	Oryzias_melastigma
ENSLBEG00000015919	polr1d	92	73.333	ENSOGAG00000014601	POLR1D	79	73.333	Otolemur_garnettii
ENSLBEG00000015919	polr1d	92	72.381	ENSOARG00000017005	POLR1D	81	72.381	Ovis_aries
ENSLBEG00000015919	polr1d	92	72.381	ENSPPAG00000028138	POLR1D	79	72.381	Pan_paniscus
ENSLBEG00000015919	polr1d	92	73.333	ENSPPRG00000003381	POLR1D	79	73.333	Panthera_pardus
ENSLBEG00000015919	polr1d	92	73.333	ENSPTIG00000018137	POLR1D	79	73.333	Panthera_tigris_altaica
ENSLBEG00000015919	polr1d	92	72.381	ENSPTRG00000005734	POLR1D	79	72.381	Pan_troglodytes
ENSLBEG00000015919	polr1d	91	62.500	ENSPANG00000035051	-	77	62.500	Papio_anubis
ENSLBEG00000015919	polr1d	92	72.381	ENSPANG00000020259	-	79	72.381	Papio_anubis
ENSLBEG00000015919	polr1d	82	80.645	ENSPKIG00000021891	polr1d	94	61.345	Paramormyrops_kingsleyae
ENSLBEG00000015919	polr1d	100	72.807	ENSPSIG00000011822	POLR1D	88	72.807	Pelodiscus_sinensis
ENSLBEG00000015919	polr1d	100	79.825	ENSPMGG00000010359	polr1d	99	79.825	Periophthalmus_magnuspinnatus
ENSLBEG00000015919	polr1d	100	71.053	ENSPMGG00000012998	POLR1D	84	71.053	Periophthalmus_magnuspinnatus
ENSLBEG00000015919	polr1d	92	71.429	ENSPEMG00000006336	-	81	71.429	Peromyscus_maniculatus_bairdii
ENSLBEG00000015919	polr1d	95	57.407	ENSPMAG00000004228	polr1d	91	57.407	Petromyzon_marinus
ENSLBEG00000015919	polr1d	100	73.684	ENSPCIG00000001673	POLR1D	100	73.684	Phascolarctos_cinereus
ENSLBEG00000015919	polr1d	100	87.719	ENSPFOG00000023343	polr1d	100	87.719	Poecilia_formosa
ENSLBEG00000015919	polr1d	100	87.719	ENSPLAG00000009675	polr1d	100	87.719	Poecilia_latipinna
ENSLBEG00000015919	polr1d	100	87.719	ENSPMEG00000004628	polr1d	100	87.719	Poecilia_mexicana
ENSLBEG00000015919	polr1d	100	87.719	ENSPREG00000022032	polr1d	100	87.719	Poecilia_reticulata
ENSLBEG00000015919	polr1d	92	70.476	ENSPCOG00000028175	POLR1D	79	70.476	Propithecus_coquereli
ENSLBEG00000015919	polr1d	100	91.228	ENSPNYG00000000107	polr1d	100	91.228	Pundamilia_nyererei
ENSLBEG00000015919	polr1d	96	71.560	ENSPNAG00000001512	polr1d	100	68.908	Pygocentrus_nattereri
ENSLBEG00000015919	polr1d	91	70.192	ENSRBIG00000000336	-	78	70.192	Rhinopithecus_bieti
ENSLBEG00000015919	polr1d	92	72.381	ENSRBIG00000036378	-	79	72.381	Rhinopithecus_bieti
ENSLBEG00000015919	polr1d	92	72.381	ENSRROG00000042232	-	79	72.381	Rhinopithecus_roxellana
ENSLBEG00000015919	polr1d	91	71.154	ENSRROG00000026751	-	78	71.154	Rhinopithecus_roxellana
ENSLBEG00000015919	polr1d	80	47.253	YNL113W	RPC19	70	44.000	Saccharomyces_cerevisiae
ENSLBEG00000015919	polr1d	92	72.381	ENSSBOG00000028482	-	79	72.381	Saimiri_boliviensis_boliviensis
ENSLBEG00000015919	polr1d	87	69.697	ENSSBOG00000030146	-	73	69.697	Saimiri_boliviensis_boliviensis
ENSLBEG00000015919	polr1d	94	74.766	ENSSHAG00000001190	POLR1D	83	74.766	Sarcophilus_harrisii
ENSLBEG00000015919	polr1d	94	79.630	ENSSFOG00015011375	polr1d	95	79.630	Scleropages_formosus
ENSLBEG00000015919	polr1d	100	92.105	ENSSMAG00000011861	polr1d	100	92.105	Scophthalmus_maximus
ENSLBEG00000015919	polr1d	100	92.982	ENSSDUG00000011930	polr1d	100	92.982	Seriola_dumerili
ENSLBEG00000015919	polr1d	99	85.965	ENSSLDG00000023871	polr1d	97	85.965	Seriola_lalandi_dorsalis
ENSLBEG00000015919	polr1d	92	73.333	ENSSARG00000007840	POLR1D	79	73.333	Sorex_araneus
ENSLBEG00000015919	polr1d	92	75.238	ENSSPUG00000005786	POLR1D	95	72.072	Sphenodon_punctatus
ENSLBEG00000015919	polr1d	100	92.105	ENSSPAG00000011764	polr1d	100	92.105	Stegastes_partitus
ENSLBEG00000015919	polr1d	92	71.429	ENSSSCG00000009310	POLR1D	79	71.429	Sus_scrofa
ENSLBEG00000015919	polr1d	82	76.344	ENSTGUG00000005450	POLR1D	97	76.344	Taeniopygia_guttata
ENSLBEG00000015919	polr1d	100	78.070	ENSTRUG00000019741	polr1d	100	78.070	Takifugu_rubripes
ENSLBEG00000015919	polr1d	92	72.381	ENSTBEG00000007006	POLR1D	85	72.381	Tupaia_belangeri
ENSLBEG00000015919	polr1d	92	73.333	ENSUAMG00000011413	POLR1D	79	73.333	Ursus_americanus
ENSLBEG00000015919	polr1d	92	73.333	ENSUMAG00000016968	POLR1D	82	73.333	Ursus_maritimus
ENSLBEG00000015919	polr1d	92	73.333	ENSVVUG00000009216	POLR1D	79	73.333	Vulpes_vulpes
ENSLBEG00000015919	polr1d	89	87.129	ENSXCOG00000011731	polr1d	78	87.129	Xiphophorus_couchianus
ENSLBEG00000015919	polr1d	89	87.129	ENSXMAG00000017538	polr1d	78	87.129	Xiphophorus_maculatus