EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000015981 (Gene tree)
Gene ID: 109986786
Gene Symbol: zgc:56699
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 9118 bases
Position: chrFKLU01000005.1:2408637-2417754
Accession: 109986786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000020790	zf-U11-48K	PF05253.12	1.5e-19	1	2
ENSLBEP00000020790	zf-U11-48K	PF05253.12	1.5e-19	2	2
ENSLBEP00000020774	zf-U11-48K	PF05253.12	3.8e-19	1	2
ENSLBEP00000020774	zf-U11-48K	PF05253.12	3.8e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000021918	-	426	XM_020637603	ENSLBEP00000020790	141 (aa)	XP_020493259	-
ENSLBET00000021902	-	2715	XM_020637594	ENSLBEP00000020774	206 (aa)	XP_020493250	UPI0009B3462C

Gene Model

Click here to download ENSLBEG00000015981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000015981's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000015981	zgc:56699	98	50.296	ENSAPOG00000021951	-	97	60.116	Acanthochromis_polyacanthus
ENSLBEG00000015981	zgc:56699	87	57.042	ENSAPOG00000000311	-	88	63.226	Acanthochromis_polyacanthus
ENSLBEG00000015981	zgc:56699	100	72.340	ENSACIG00000013400	zgc:56699	97	72.340	Amphilophus_citrinellus
ENSLBEG00000015981	zgc:56699	98	51.765	ENSAOCG00000013650	-	97	64.162	Amphiprion_ocellaris
ENSLBEG00000015981	zgc:56699	98	59.859	ENSAPEG00000006689	zgc:56699	95	59.859	Amphiprion_percula
ENSLBEG00000015981	zgc:56699	100	76.871	ENSATEG00000024058	zgc:56699	97	78.857	Anabas_testudineus
ENSLBEG00000015981	zgc:56699	100	54.802	ENSACLG00000023562	zgc:56699	92	67.778	Astatotilapia_calliptera
ENSLBEG00000015981	zgc:56699	86	46.203	ENSAMXG00000036095	-	65	51.613	Astyanax_mexicanus
ENSLBEG00000015981	zgc:56699	100	48.066	ENSAMXG00000038346	zgc:56699	99	57.459	Astyanax_mexicanus
ENSLBEG00000015981	zgc:56699	100	55.747	ENSCSEG00000021520	zgc:56699	83	65.714	Cynoglossus_semilaevis
ENSLBEG00000015981	zgc:56699	79	53.077	ENSCVAG00000009972	zgc:56699	74	61.538	Cyprinodon_variegatus
ENSLBEG00000015981	zgc:56699	86	42.675	ENSDARG00000099586	CR382383.2	88	50.318	Danio_rerio
ENSLBEG00000015981	zgc:56699	98	43.333	ENSDARG00000000887	zgc:56699	98	51.111	Danio_rerio
ENSLBEG00000015981	zgc:56699	50	31.193	FBgn0036826	arx	57	31.193	Drosophila_melanogaster
ENSLBEG00000015981	zgc:56699	79	42.105	ENSEBUG00000005577	-	62	45.763	Eptatretus_burgeri
ENSLBEG00000015981	zgc:56699	87	53.503	ENSELUG00000003242	gtsf1	86	63.694	Esox_lucius
ENSLBEG00000015981	zgc:56699	100	68.027	ENSFHEG00000006036	zgc:56699	97	68.027	Fundulus_heteroclitus
ENSLBEG00000015981	zgc:56699	81	68.644	ENSGMOG00000007295	zgc:56699	98	68.644	Gadus_morhua
ENSLBEG00000015981	zgc:56699	64	43.878	ENSGALG00000035365	-	65	46.957	Gallus_gallus
ENSLBEG00000015981	zgc:56699	99	57.803	ENSGAFG00000020743	zgc:56699	97	69.364	Gambusia_affinis
ENSLBEG00000015981	zgc:56699	100	55.367	ENSHBUG00000005327	zgc:56699	98	67.797	Haplochromis_burtoni
ENSLBEG00000015981	zgc:56699	99	46.857	ENSHCOG00000010296	-	99	50.562	Hippocampus_comes
ENSLBEG00000015981	zgc:56699	99	44.000	ENSIPUG00000011498	zgc:56699	95	51.136	Ictalurus_punctatus
ENSLBEG00000015981	zgc:56699	77	40.000	ENSLOCG00000004469	zgc:56699	97	48.227	Lepisosteus_oculatus
ENSLBEG00000015981	zgc:56699	99	56.140	ENSMAMG00000001846	zgc:56699	97	66.667	Mastacembelus_armatus
ENSLBEG00000015981	zgc:56699	100	54.802	ENSMZEG00005026479	zgc:56699	92	67.778	Maylandia_zebra
ENSLBEG00000015981	zgc:56699	100	46.961	ENSMMOG00000017331	zgc:56699	97	51.630	Mola_mola
ENSLBEG00000015981	zgc:56699	100	55.367	ENSNBRG00000006336	zgc:56699	98	68.362	Neolamprologus_brichardi
ENSLBEG00000015981	zgc:56699	100	55.367	ENSONIG00000016720	zgc:56699	94	67.027	Oreochromis_niloticus
ENSLBEG00000015981	zgc:56699	54	40.000	ENSOANG00000030381	-	74	40.000	Ornithorhynchus_anatinus
ENSLBEG00000015981	zgc:56699	77	62.385	ENSORLG00000025877	-	90	59.732	Oryzias_latipes
ENSLBEG00000015981	zgc:56699	100	47.619	ENSORLG00000015258	-	97	53.448	Oryzias_latipes
ENSLBEG00000015981	zgc:56699	77	62.385	ENSORLG00020011013	-	90	59.732	Oryzias_latipes_hni
ENSLBEG00000015981	zgc:56699	100	48.810	ENSORLG00020010990	-	97	53.448	Oryzias_latipes_hni
ENSLBEG00000015981	zgc:56699	100	48.214	ENSORLG00015004961	zgc:56699	97	54.023	Oryzias_latipes_hsok
ENSLBEG00000015981	zgc:56699	83	52.991	ENSOMEG00000013200	-	92	54.930	Oryzias_melastigma
ENSLBEG00000015981	zgc:56699	100	52.096	ENSOMEG00000021739	-	97	57.803	Oryzias_melastigma
ENSLBEG00000015981	zgc:56699	100	52.601	ENSOMEG00000021773	-	97	60.571	Oryzias_melastigma
ENSLBEG00000015981	zgc:56699	99	40.782	ENSPKIG00000017039	zgc:56699	98	46.369	Paramormyrops_kingsleyae
ENSLBEG00000015981	zgc:56699	98	70.833	ENSPMGG00000023241	zgc:56699	95	70.833	Periophthalmus_magnuspinnatus
ENSLBEG00000015981	zgc:56699	50	56.338	ENSPMAG00000009653	-	93	45.000	Petromyzon_marinus
ENSLBEG00000015981	zgc:56699	56	39.241	ENSPCIG00000006734	-	99	39.241	Phascolarctos_cinereus
ENSLBEG00000015981	zgc:56699	99	58.382	ENSPFOG00000009204	zgc:56699	97	69.942	Poecilia_formosa
ENSLBEG00000015981	zgc:56699	99	68.276	ENSPLAG00000009088	zgc:56699	96	68.276	Poecilia_latipinna
ENSLBEG00000015981	zgc:56699	99	58.382	ENSPMEG00000001443	zgc:56699	97	69.942	Poecilia_mexicana
ENSLBEG00000015981	zgc:56699	99	71.631	ENSPREG00000000745	zgc:56699	96	71.631	Poecilia_reticulata
ENSLBEG00000015981	zgc:56699	100	55.367	ENSPNYG00000002811	zgc:56699	98	68.362	Pundamilia_nyererei
ENSLBEG00000015981	zgc:56699	99	51.124	ENSPNAG00000005165	zgc:56699	98	60.674	Pygocentrus_nattereri
ENSLBEG00000015981	zgc:56699	96	46.154	ENSSFOG00015021600	zgc:56699	94	52.353	Scleropages_formosus
ENSLBEG00000015981	zgc:56699	100	60.947	ENSSMAG00000020886	zgc:56699	97	70.857	Scophthalmus_maximus
ENSLBEG00000015981	zgc:56699	100	74.830	ENSSDUG00000002033	zgc:56699	97	75.429	Seriola_dumerili
ENSLBEG00000015981	zgc:56699	100	74.150	ENSSLDG00000014113	zgc:56699	97	75.429	Seriola_lalandi_dorsalis
ENSLBEG00000015981	zgc:56699	99	67.133	ENSSPAG00000019854	-	98	67.836	Stegastes_partitus
ENSLBEG00000015981	zgc:56699	70	64.000	ENSSPAG00000010005	-	96	64.000	Stegastes_partitus
ENSLBEG00000015981	zgc:56699	100	50.289	ENSTRUG00000015537	zgc:56699	98	60.227	Takifugu_rubripes
ENSLBEG00000015981	zgc:56699	83	63.115	ENSTNIG00000012515	zgc:56699	98	64.626	Tetraodon_nigroviridis
ENSLBEG00000015981	zgc:56699	97	61.538	ENSXCOG00000014400	zgc:56699	91	63.587	Xiphophorus_couchianus
ENSLBEG00000015981	zgc:56699	97	59.064	ENSXMAG00000011692	zgc:56699	96	70.760	Xiphophorus_maculatus