EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000016296 (Gene tree)
Gene ID: 109992040
Gene Symbol: gpatch4
Alias: im:7138553|si:dkey-202i12.4
Full Name: G patch domain-containing protein 4-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5037 bases
Position: chrFKLU01000220.1:451597-456633
Accession: 109992040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000021195	G-patch	PF01585.23	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000022330	-	2645	XM_020644517	ENSLBEP00000021195	445 (aa)	XP_020500173	UPI0009B40595

Gene Model

Click here to download ENSLBEG00000016296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000016296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000016296	gpatch4	98	90.596	ENSLBEG00000009364	-	95	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000016296	gpatch4	99	64.172	ENSAPOG00000008436	gpatch4	94	66.005	Acanthochromis_polyacanthus
ENSLBEG00000016296	gpatch4	80	97.222	ENSAOCG00000015494	gpatch4	96	97.222	Amphiprion_ocellaris
ENSLBEG00000016296	gpatch4	99	64.172	ENSAPEG00000022243	gpatch4	98	61.556	Amphiprion_percula
ENSLBEG00000016296	gpatch4	86	71.244	ENSATEG00000006359	gpatch4	93	69.118	Anabas_testudineus
ENSLBEG00000016296	gpatch4	78	69.653	ENSACLG00000010456	gpatch4	97	62.195	Astatotilapia_calliptera
ENSLBEG00000016296	gpatch4	80	36.020	ENSCAFG00000016788	GPATCH4	85	31.920	Canis_familiaris
ENSLBEG00000016296	gpatch4	92	49.286	ENSDARG00000091931	gpatch4	81	73.125	Danio_rerio
ENSLBEG00000016296	gpatch4	61	62.094	ENSELUG00000011900	gpatch4	50	68.670	Esox_lucius
ENSLBEG00000016296	gpatch4	86	59.580	ENSFHEG00000003097	gpatch4	90	59.580	Fundulus_heteroclitus
ENSLBEG00000016296	gpatch4	77	58.239	ENSGACG00000013318	gpatch4	63	82.710	Gasterosteus_aculeatus
ENSLBEG00000016296	gpatch4	78	69.942	ENSHBUG00000009675	gpatch4	96	62.439	Haplochromis_burtoni
ENSLBEG00000016296	gpatch4	50	73.778	ENSIPUG00000006348	gpatch4	71	66.222	Ictalurus_punctatus
ENSLBEG00000016296	gpatch4	52	80.435	ENSKMAG00000015765	gpatch4	61	79.412	Kryptolebias_marmoratus
ENSLBEG00000016296	gpatch4	51	57.627	ENSLACG00000009700	GPATCH4	66	55.230	Latimeria_chalumnae
ENSLBEG00000016296	gpatch4	51	34.874	ENSLAFG00000028327	-	50	36.864	Loxodonta_africana
ENSLBEG00000016296	gpatch4	97	63.908	ENSMAMG00000010151	gpatch4	97	62.759	Mastacembelus_armatus
ENSLBEG00000016296	gpatch4	78	69.075	ENSMZEG00005017452	gpatch4	97	61.463	Maylandia_zebra
ENSLBEG00000016296	gpatch4	76	92.405	ENSMMOG00000017095	gpatch4	94	97.333	Mola_mola
ENSLBEG00000016296	gpatch4	55	44.939	ENSMODG00000016818	-	77	44.351	Monodelphis_domestica
ENSLBEG00000016296	gpatch4	99	62.022	ENSMALG00000003793	gpatch4	98	62.132	Monopterus_albus
ENSLBEG00000016296	gpatch4	100	62.361	ENSONIG00000002261	gpatch4	95	64.128	Oreochromis_niloticus
ENSLBEG00000016296	gpatch4	98	53.776	ENSPFOG00000011835	gpatch4	74	66.013	Poecilia_formosa
ENSLBEG00000016296	gpatch4	98	53.547	ENSPLAG00000019504	gpatch4	74	65.033	Poecilia_latipinna
ENSLBEG00000016296	gpatch4	99	55.204	ENSPMEG00000001375	gpatch4	94	57.353	Poecilia_mexicana
ENSLBEG00000016296	gpatch4	89	55.831	ENSPREG00000017029	gpatch4	79	62.866	Poecilia_reticulata
ENSLBEG00000016296	gpatch4	51	44.248	ENSPVAG00000007505	-	51	42.667	Pteropus_vampyrus
ENSLBEG00000016296	gpatch4	78	69.942	ENSPNYG00000018461	gpatch4	97	62.439	Pundamilia_nyererei
ENSLBEG00000016296	gpatch4	53	42.616	ENSSHAG00000015436	-	78	42.616	Sarcophilus_harrisii
ENSLBEG00000016296	gpatch4	98	69.300	ENSSMAG00000016329	gpatch4	98	67.265	Scophthalmus_maximus
ENSLBEG00000016296	gpatch4	99	67.785	ENSSDUG00000006583	gpatch4	98	67.955	Seriola_dumerili
ENSLBEG00000016296	gpatch4	99	67.562	ENSSLDG00000012365	gpatch4	98	66.818	Seriola_lalandi_dorsalis
ENSLBEG00000016296	gpatch4	97	65.438	ENSSPAG00000011683	gpatch4	98	65.446	Stegastes_partitus
ENSLBEG00000016296	gpatch4	50	73.094	ENSTNIG00000005156	gpatch4	74	72.768	Tetraodon_nigroviridis
ENSLBEG00000016296	gpatch4	59	66.412	ENSXCOG00000003911	gpatch4	94	53.041	Xiphophorus_couchianus
ENSLBEG00000016296	gpatch4	98	53.318	ENSXMAG00000024520	gpatch4	93	55.637	Xiphophorus_maculatus