EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000016308 (Gene tree)
Gene ID: 109997069
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 11525 bases
Position: chrFKLU01000400.1:286253-297777
Accession: 109997069
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000021252	ARS2	PF04959.13	5.3e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000022387	-	2547	XM_020651435	ENSLBEP00000021252	848 (aa)	XP_020507091	-

Gene Model

Click here to download ENSLBEG00000016308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000016308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000016308	srrt	52	66.000	ENSLBEG00000028983	-	73	68.327

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000016308	srrt	54	76.724	ENSG00000087087	SRRT	98	87.097	Homo_sapiens
ENSLBEG00000016308	srrt	86	92.364	ENSAPOG00000002304	srrt	98	84.211	Acanthochromis_polyacanthus
ENSLBEG00000016308	srrt	81	76.573	ENSAMEG00000014506	SRRT	82	74.837	Ailuropoda_melanoleuca
ENSLBEG00000016308	srrt	95	85.820	ENSACIG00000015795	srrt	98	85.938	Amphilophus_citrinellus
ENSLBEG00000016308	srrt	95	86.626	ENSAOCG00000009693	srrt	98	86.722	Amphiprion_ocellaris
ENSLBEG00000016308	srrt	92	54.212	ENSAOCG00000009189	-	96	57.913	Amphiprion_ocellaris
ENSLBEG00000016308	srrt	95	85.450	ENSAPEG00000003646	srrt	97	85.577	Amphiprion_percula
ENSLBEG00000016308	srrt	92	54.212	ENSAPEG00000020016	-	96	57.913	Amphiprion_percula
ENSLBEG00000016308	srrt	95	84.340	ENSATEG00000014425	srrt	98	85.096	Anabas_testudineus
ENSLBEG00000016308	srrt	56	63.768	ENSATEG00000003652	-	85	65.672	Anabas_testudineus
ENSLBEG00000016308	srrt	81	74.043	ENSACAG00000001014	SRRT	81	74.353	Anolis_carolinensis
ENSLBEG00000016308	srrt	54	76.445	ENSANAG00000031718	SRRT	53	74.678	Aotus_nancymaae
ENSLBEG00000016308	srrt	86	91.775	ENSACLG00000013156	srrt	94	82.755	Astatotilapia_calliptera
ENSLBEG00000016308	srrt	79	65.263	ENSACLG00000009423	-	79	65.591	Astatotilapia_calliptera
ENSLBEG00000016308	srrt	54	76.231	ENSBTAG00000001134	SRRT	53	74.464	Bos_taurus
ENSLBEG00000016308	srrt	59	46.966	WBGene00017085	E01A2.2	85	42.308	Caenorhabditis_elegans
ENSLBEG00000016308	srrt	54	75.751	ENSCJAG00000014917	SRRT	53	74.464	Callithrix_jacchus
ENSLBEG00000016308	srrt	54	76.231	ENSCAFG00000023538	SRRT	53	74.464	Canis_familiaris
ENSLBEG00000016308	srrt	98	64.228	ENSCAFG00020013358	SRRT	99	63.203	Canis_lupus_dingo
ENSLBEG00000016308	srrt	91	76.509	ENSCHIG00000010495	SRRT	82	74.730	Capra_hircus
ENSLBEG00000016308	srrt	54	76.724	ENSTSYG00000036426	SRRT	84	72.271	Carlito_syrichta
ENSLBEG00000016308	srrt	54	76.139	ENSCAPG00000013586	SRRT	100	65.426	Cavia_aperea
ENSLBEG00000016308	srrt	55	73.306	ENSCPOG00000001739	SRRT	96	65.176	Cavia_porcellus
ENSLBEG00000016308	srrt	54	76.445	ENSCCAG00000015877	SRRT	53	74.678	Cebus_capucinus
ENSLBEG00000016308	srrt	89	74.947	ENSCATG00000036306	SRRT	85	73.207	Cercocebus_atys
ENSLBEG00000016308	srrt	96	64.789	ENSCLAG00000007568	SRRT	96	65.704	Chinchilla_lanigera
ENSLBEG00000016308	srrt	54	76.445	ENSCSAG00000017996	SRRT	53	74.678	Chlorocebus_sabaeus
ENSLBEG00000016308	srrt	56	70.513	ENSCHOG00000007815	SRRT	67	70.513	Choloepus_hoffmanni
ENSLBEG00000016308	srrt	76	68.679	ENSCPBG00000011553	SRRT	86	69.388	Chrysemys_picta_bellii
ENSLBEG00000016308	srrt	100	41.630	ENSCING00000003506	-	89	42.484	Ciona_intestinalis
ENSLBEG00000016308	srrt	100	41.512	ENSCSAVG00000008394	-	99	41.485	Ciona_savignyi
ENSLBEG00000016308	srrt	54	76.724	ENSCANG00000034556	SRRT	53	74.946	Colobus_angolensis_palliatus
ENSLBEG00000016308	srrt	54	76.231	ENSCGRG00001001594	Srrt	96	64.775	Cricetulus_griseus_chok1gshd
ENSLBEG00000016308	srrt	72	79.739	ENSCGRG00000007292	Srrt	95	80.392	Cricetulus_griseus_crigri
ENSLBEG00000016308	srrt	54	62.971	ENSCSEG00000005233	-	96	56.071	Cynoglossus_semilaevis
ENSLBEG00000016308	srrt	98	71.914	ENSCSEG00000017878	srrt	98	71.977	Cynoglossus_semilaevis
ENSLBEG00000016308	srrt	95	83.990	ENSCVAG00000019848	srrt	98	84.154	Cyprinodon_variegatus
ENSLBEG00000016308	srrt	80	64.318	ENSCVAG00000017344	-	96	55.868	Cyprinodon_variegatus
ENSLBEG00000016308	srrt	58	76.744	ENSDARG00000017762	srrt	98	73.077	Danio_rerio
ENSLBEG00000016308	srrt	54	75.322	ENSDORG00000005584	Srrt	89	71.767	Dipodomys_ordii
ENSLBEG00000016308	srrt	85	51.592	FBgn0033062	Ars2	68	51.261	Drosophila_melanogaster
ENSLBEG00000016308	srrt	77	73.207	ENSETEG00000016175	SRRT	71	74.839	Echinops_telfairi
ENSLBEG00000016308	srrt	77	52.600	ENSEBUG00000008517	-	88	51.433	Eptatretus_burgeri
ENSLBEG00000016308	srrt	54	76.445	ENSEASG00005016956	SRRT	53	74.678	Equus_asinus_asinus
ENSLBEG00000016308	srrt	54	76.445	ENSECAG00000012292	SRRT	53	74.678	Equus_caballus
ENSLBEG00000016308	srrt	72	76.042	ENSEEUG00000009117	SRRT	81	77.083	Erinaceus_europaeus
ENSLBEG00000016308	srrt	82	67.364	ENSELUG00000021216	-	96	56.636	Esox_lucius
ENSLBEG00000016308	srrt	87	83.333	ENSELUG00000006651	srrt	84	82.546	Esox_lucius
ENSLBEG00000016308	srrt	54	76.445	ENSFCAG00000006855	SRRT	53	74.678	Felis_catus
ENSLBEG00000016308	srrt	54	71.367	ENSFDAG00000021347	SRRT	88	68.547	Fukomys_damarensis
ENSLBEG00000016308	srrt	87	87.081	ENSFHEG00000002756	srrt	97	86.842	Fundulus_heteroclitus
ENSLBEG00000016308	srrt	55	57.054	ENSFHEG00000004105	-	93	57.325	Fundulus_heteroclitus
ENSLBEG00000016308	srrt	68	66.067	ENSGMOG00000018694	-	92	78.261	Gadus_morhua
ENSLBEG00000016308	srrt	87	80.610	ENSGMOG00000018619	srrt	98	71.511	Gadus_morhua
ENSLBEG00000016308	srrt	54	89.417	ENSGAFG00000005423	srrt	98	80.462	Gambusia_affinis
ENSLBEG00000016308	srrt	80	63.636	ENSGACG00000001100	-	81	63.566	Gasterosteus_aculeatus
ENSLBEG00000016308	srrt	95	80.516	ENSGACG00000020387	srrt	98	80.664	Gasterosteus_aculeatus
ENSLBEG00000016308	srrt	54	76.724	ENSGGOG00000001508	SRRT	82	74.946	Gorilla_gorilla
ENSLBEG00000016308	srrt	86	91.558	ENSHBUG00000002942	srrt	94	82.639	Haplochromis_burtoni
ENSLBEG00000016308	srrt	81	75.693	ENSHGLG00000008344	Srrt	96	64.671	Heterocephalus_glaber_female
ENSLBEG00000016308	srrt	81	76.509	ENSHGLG00100018857	Srrt	96	64.630	Heterocephalus_glaber_male
ENSLBEG00000016308	srrt	92	55.076	ENSHCOG00000008904	-	95	52.941	Hippocampus_comes
ENSLBEG00000016308	srrt	91	85.685	ENSHCOG00000005403	srrt	98	80.120	Hippocampus_comes
ENSLBEG00000016308	srrt	55	80.380	ENSIPUG00000021150	srrt	98	70.790	Ictalurus_punctatus
ENSLBEG00000016308	srrt	54	76.724	ENSSTOG00000013776	SRRT	53	74.946	Ictidomys_tridecemlineatus
ENSLBEG00000016308	srrt	54	76.573	ENSJJAG00000010446	Srrt	89	72.138	Jaculus_jaculus
ENSLBEG00000016308	srrt	95	81.628	ENSKMAG00000013599	srrt	98	82.332	Kryptolebias_marmoratus
ENSLBEG00000016308	srrt	78	63.825	ENSKMAG00000008468	-	79	65.957	Kryptolebias_marmoratus
ENSLBEG00000016308	srrt	86	70.566	ENSLACG00000001089	SRRT	88	72.355	Latimeria_chalumnae
ENSLBEG00000016308	srrt	71	86.275	ENSLOCG00000013658	srrt	82	74.026	Lepisosteus_oculatus
ENSLBEG00000016308	srrt	54	76.180	ENSLAFG00000007725	SRRT	96	64.894	Loxodonta_africana
ENSLBEG00000016308	srrt	54	76.724	ENSMFAG00000033745	SRRT	86	73.207	Macaca_fascicularis
ENSLBEG00000016308	srrt	54	76.445	ENSMMUG00000021255	SRRT	96	65.081	Macaca_mulatta
ENSLBEG00000016308	srrt	91	74.947	ENSMNEG00000041864	SRRT	84	73.207	Macaca_nemestrina
ENSLBEG00000016308	srrt	54	76.724	ENSMLEG00000029479	SRRT	84	73.207	Mandrillus_leucophaeus
ENSLBEG00000016308	srrt	86	90.733	ENSMAMG00000014311	srrt	98	82.775	Mastacembelus_armatus
ENSLBEG00000016308	srrt	81	66.173	ENSMAMG00000010681	-	96	57.913	Mastacembelus_armatus
ENSLBEG00000016308	srrt	79	65.474	ENSMZEG00005028002	-	79	65.806	Maylandia_zebra
ENSLBEG00000016308	srrt	86	91.775	ENSMZEG00005016135	srrt	94	82.639	Maylandia_zebra
ENSLBEG00000016308	srrt	54	76.231	ENSMAUG00000011386	Srrt	89	71.125	Mesocricetus_auratus
ENSLBEG00000016308	srrt	54	76.445	ENSMICG00000009471	SRRT	84	73.629	Microcebus_murinus
ENSLBEG00000016308	srrt	54	76.445	ENSMOCG00000001971	Srrt	96	65.799	Microtus_ochrogaster
ENSLBEG00000016308	srrt	75	67.521	ENSMMOG00000011137	-	88	66.234	Mola_mola
ENSLBEG00000016308	srrt	95	86.156	ENSMMOG00000016399	srrt	98	86.627	Mola_mola
ENSLBEG00000016308	srrt	54	71.398	ENSMODG00000004862	SRRT	94	67.928	Monodelphis_domestica
ENSLBEG00000016308	srrt	98	76.084	ENSMALG00000018604	srrt	99	75.563	Monopterus_albus
ENSLBEG00000016308	srrt	57	50.622	ENSMALG00000005567	-	84	52.620	Monopterus_albus
ENSLBEG00000016308	srrt	54	76.573	MGP_CAROLIEiJ_G0027870	Srrt	99	72.388	Mus_caroli
ENSLBEG00000016308	srrt	54	76.573	ENSMUSG00000037364	Srrt	99	72.388	Mus_musculus
ENSLBEG00000016308	srrt	54	76.304	MGP_PahariEiJ_G0024456	Srrt	99	72.388	Mus_pahari
ENSLBEG00000016308	srrt	54	76.573	MGP_SPRETEiJ_G0028875	Srrt	99	72.388	Mus_spretus
ENSLBEG00000016308	srrt	54	76.445	ENSMPUG00000015839	SRRT	53	74.678	Mustela_putorius_furo
ENSLBEG00000016308	srrt	54	76.231	ENSMLUG00000009975	SRRT	53	74.464	Myotis_lucifugus
ENSLBEG00000016308	srrt	54	76.445	ENSNGAG00000023715	Srrt	96	65.684	Nannospalax_galili
ENSLBEG00000016308	srrt	55	90.618	ENSNBRG00000019100	srrt	98	79.698	Neolamprologus_brichardi
ENSLBEG00000016308	srrt	83	67.699	ENSNLEG00000011987	SRRT	88	65.351	Nomascus_leucogenys
ENSLBEG00000016308	srrt	83	62.500	ENSMEUG00000011941	SRRT	96	53.746	Notamacropus_eugenii
ENSLBEG00000016308	srrt	64	74.242	ENSOPRG00000002502	-	67	78.788	Ochotona_princeps
ENSLBEG00000016308	srrt	54	76.356	ENSODEG00000016856	SRRT	96	65.243	Octodon_degus
ENSLBEG00000016308	srrt	79	66.038	ENSONIG00000016080	-	95	56.345	Oreochromis_niloticus
ENSLBEG00000016308	srrt	86	91.558	ENSONIG00000004242	srrt	98	80.660	Oreochromis_niloticus
ENSLBEG00000016308	srrt	98	78.176	ENSORLG00000008120	srrt	98	78.125	Oryzias_latipes
ENSLBEG00000016308	srrt	98	78.472	ENSORLG00020003058	srrt	98	78.522	Oryzias_latipes_hni
ENSLBEG00000016308	srrt	98	78.588	ENSORLG00015008062	srrt	98	78.637	Oryzias_latipes_hsok
ENSLBEG00000016308	srrt	98	82.091	ENSOMEG00000003155	srrt	98	82.572	Oryzias_melastigma
ENSLBEG00000016308	srrt	92	58.612	ENSOMEG00000006963	-	96	59.592	Oryzias_melastigma
ENSLBEG00000016308	srrt	54	76.445	ENSOGAG00000017242	SRRT	53	74.893	Otolemur_garnettii
ENSLBEG00000016308	srrt	54	76.509	ENSOARG00000015645	SRRT	53	74.730	Ovis_aries
ENSLBEG00000016308	srrt	89	72.899	ENSPPAG00000041090	SRRT	85	71.158	Pan_paniscus
ENSLBEG00000016308	srrt	54	76.724	ENSPPRG00000009557	SRRT	53	74.514	Panthera_pardus
ENSLBEG00000016308	srrt	54	76.445	ENSPTIG00000014355	SRRT	53	74.678	Panthera_tigris_altaica
ENSLBEG00000016308	srrt	54	76.724	ENSPTRG00000019511	SRRT	53	74.946	Pan_troglodytes
ENSLBEG00000016308	srrt	54	74.947	ENSPANG00000020763	SRRT	83	73.207	Papio_anubis
ENSLBEG00000016308	srrt	98	74.399	ENSPKIG00000005434	srrt	98	74.880	Paramormyrops_kingsleyae
ENSLBEG00000016308	srrt	85	79.437	ENSPKIG00000022212	-	98	70.616	Paramormyrops_kingsleyae
ENSLBEG00000016308	srrt	89	89.394	ENSPMGG00000002841	srrt	92	88.095	Periophthalmus_magnuspinnatus
ENSLBEG00000016308	srrt	54	76.573	ENSPEMG00000010834	Srrt	89	71.706	Peromyscus_maniculatus_bairdii
ENSLBEG00000016308	srrt	96	54.911	ENSPMAG00000009614	-	81	62.288	Petromyzon_marinus
ENSLBEG00000016308	srrt	54	72.996	ENSPCIG00000000816	SRRT	53	73.404	Phascolarctos_cinereus
ENSLBEG00000016308	srrt	92	55.250	ENSPFOG00000016554	-	96	56.145	Poecilia_formosa
ENSLBEG00000016308	srrt	54	89.440	ENSPFOG00000005704	srrt	98	81.293	Poecilia_formosa
ENSLBEG00000016308	srrt	92	54.580	ENSPLAG00000004526	-	96	56.106	Poecilia_latipinna
ENSLBEG00000016308	srrt	86	90.441	ENSPLAG00000021992	srrt	98	79.200	Poecilia_latipinna
ENSLBEG00000016308	srrt	79	94.787	ENSPMEG00000001182	srrt	86	94.828	Poecilia_mexicana
ENSLBEG00000016308	srrt	88	54.749	ENSPMEG00000001520	-	95	55.266	Poecilia_mexicana
ENSLBEG00000016308	srrt	95	79.763	ENSPREG00000022308	srrt	98	81.178	Poecilia_reticulata
ENSLBEG00000016308	srrt	54	74.051	ENSPCAG00000001621	SRRT	53	72.304	Procavia_capensis
ENSLBEG00000016308	srrt	54	76.724	ENSPCOG00000025751	SRRT	53	75.162	Propithecus_coquereli
ENSLBEG00000016308	srrt	54	68.522	ENSPVAG00000000834	SRRT	68	66.738	Pteropus_vampyrus
ENSLBEG00000016308	srrt	86	91.775	ENSPNYG00000018710	srrt	98	82.755	Pundamilia_nyererei
ENSLBEG00000016308	srrt	82	89.241	ENSPNAG00000010629	srrt	79	87.293	Pygocentrus_nattereri
ENSLBEG00000016308	srrt	54	65.875	ENSRNOG00000048277	AABR07035787.1	92	64.147	Rattus_norvegicus
ENSLBEG00000016308	srrt	91	74.947	ENSRBIG00000035718	SRRT	84	73.207	Rhinopithecus_bieti
ENSLBEG00000016308	srrt	91	74.947	ENSRROG00000030622	SRRT	84	73.207	Rhinopithecus_roxellana
ENSLBEG00000016308	srrt	54	76.724	ENSSBOG00000033570	SRRT	83	74.946	Saimiri_boliviensis_boliviensis
ENSLBEG00000016308	srrt	56	71.084	ENSSHAG00000007349	-	74	73.036	Sarcophilus_harrisii
ENSLBEG00000016308	srrt	85	83.660	ENSSFOG00015017293	srrt	85	84.532	Scleropages_formosus
ENSLBEG00000016308	srrt	95	84.211	ENSSMAG00000015342	srrt	98	87.019	Scophthalmus_maximus
ENSLBEG00000016308	srrt	54	65.302	ENSSMAG00000018195	-	95	55.942	Scophthalmus_maximus
ENSLBEG00000016308	srrt	55	92.751	ENSSDUG00000012049	srrt	98	86.817	Seriola_dumerili
ENSLBEG00000016308	srrt	54	54.886	ENSSDUG00000002051	-	93	55.021	Seriola_dumerili
ENSLBEG00000016308	srrt	95	86.436	ENSSLDG00000017477	srrt	98	87.019	Seriola_lalandi_dorsalis
ENSLBEG00000016308	srrt	55	94.055	ENSSPAG00000005665	srrt	96	83.103	Stegastes_partitus
ENSLBEG00000016308	srrt	54	58.009	ENSSPAG00000018943	-	95	57.683	Stegastes_partitus
ENSLBEG00000016308	srrt	52	75.506	ENSSSCG00000024789	SRRT	99	63.113	Sus_scrofa
ENSLBEG00000016308	srrt	90	54.082	ENSTRUG00000000023	-	94	55.322	Takifugu_rubripes
ENSLBEG00000016308	srrt	89	87.419	ENSTRUG00000016075	srrt	98	78.538	Takifugu_rubripes
ENSLBEG00000016308	srrt	92	53.790	ENSTNIG00000003111	-	96	54.152	Tetraodon_nigroviridis
ENSLBEG00000016308	srrt	65	85.714	ENSTNIG00000011779	srrt	100	74.695	Tetraodon_nigroviridis
ENSLBEG00000016308	srrt	60	77.465	ENSTBEG00000005212	SRRT	58	77.465	Tupaia_belangeri
ENSLBEG00000016308	srrt	54	76.445	ENSTTRG00000011104	SRRT	53	74.678	Tursiops_truncatus
ENSLBEG00000016308	srrt	54	76.445	ENSUAMG00000027997	SRRT	84	74.678	Ursus_americanus
ENSLBEG00000016308	srrt	54	76.445	ENSUMAG00000011295	SRRT	53	74.678	Ursus_maritimus
ENSLBEG00000016308	srrt	54	76.231	ENSVVUG00000023572	SRRT	53	74.464	Vulpes_vulpes
ENSLBEG00000016308	srrt	75	78.090	ENSXETG00000025124	srrt	74	82.584	Xenopus_tropicalis
ENSLBEG00000016308	srrt	56	51.992	ENSXCOG00000013105	-	91	53.030	Xiphophorus_couchianus
ENSLBEG00000016308	srrt	86	94.382	ENSXMAG00000007627	srrt	98	83.413	Xiphophorus_maculatus
ENSLBEG00000016308	srrt	92	54.887	ENSXMAG00000002090	-	96	56.574	Xiphophorus_maculatus