EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000016417 (Gene tree)
Gene ID: 109992034
Gene Symbol: rab11al
Alias: fc54g10|wu:fc54g10|zgc:63565
Full Name: ras-related protein Rab-11A-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 12098 bases
Position: chrFKLU01000220.1:589843-601940
Accession: 109992034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000021365	MMR_HSR1	PF01926.23	4.1e-07	1	1
ENSLBEP00000021376	MMR_HSR1	PF01926.23	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000022526	-	1098	XM_020644511	ENSLBEP00000021376	216 (aa)	XP_020500167	UPI0009B3D559
ENSLBET00000022515	-	633	-	ENSLBEP00000021365	210 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000016417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000016417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000016417	rab11al	87	33.333	ENSLBEG00000019372	rab6bb	91	33.333
ENSLBEG00000016417	rab11al	81	39.444	ENSLBEG00000002926	si:dkey-34d22.5	80	39.444
ENSLBEG00000016417	rab11al	86	41.935	ENSLBEG00000001146	rab30	90	41.935
ENSLBEG00000016417	rab11al	76	45.283	ENSLBEG00000013463	rab15	75	45.283
ENSLBEG00000016417	rab11al	75	44.654	ENSLBEG00000019428	rab18b	79	44.444
ENSLBEG00000016417	rab11al	76	47.170	ENSLBEG00000007681	si:dkey-16l2.16	98	40.094
ENSLBEG00000016417	rab11al	55	30.252	ENSLBEG00000012677	arl4cb	60	30.252
ENSLBEG00000016417	rab11al	89	30.049	ENSLBEG00000016218	rasl11a	77	30.049
ENSLBEG00000016417	rab11al	84	42.077	ENSLBEG00000001193	rab42a	98	38.785
ENSLBEG00000016417	rab11al	69	42.000	ENSLBEG00000018063	-	62	42.000
ENSLBEG00000016417	rab11al	77	36.585	ENSLBEG00000008746	RAB41	78	36.585
ENSLBEG00000016417	rab11al	75	42.675	ENSLBEG00000003235	rab22a	81	42.675
ENSLBEG00000016417	rab11al	75	48.408	ENSLBEG00000010408	-	71	48.408
ENSLBEG00000016417	rab11al	99	81.395	ENSLBEG00000004172	-	99	81.395
ENSLBEG00000016417	rab11al	70	34.694	ENSLBEG00000001905	hrasb	85	35.802
ENSLBEG00000016417	rab11al	89	42.781	ENSLBEG00000027539	-	85	42.781
ENSLBEG00000016417	rab11al	98	60.377	ENSLBEG00000002367	rab25a	98	60.377
ENSLBEG00000016417	rab11al	94	43.627	ENSLBEG00000002516	rab5aa	86	43.627
ENSLBEG00000016417	rab11al	79	52.047	ENSLBEG00000003101	rab4a	80	52.047
ENSLBEG00000016417	rab11al	75	49.682	ENSLBEG00000004128	rab5c	71	49.682
ENSLBEG00000016417	rab11al	75	32.099	ENSLBEG00000027628	si:cabz01085950.1	81	31.288
ENSLBEG00000016417	rab11al	78	31.953	ENSLBEG00000013176	rab23	90	32.447
ENSLBEG00000016417	rab11al	73	33.548	ENSLBEG00000028450	kras	87	34.731
ENSLBEG00000016417	rab11al	96	46.377	ENSLBEG00000021040	rab1ba	99	46.377
ENSLBEG00000016417	rab11al	95	32.558	ENSLBEG00000005018	rab32b	95	32.558
ENSLBEG00000016417	rab11al	80	39.306	ENSLBEG00000001796	RAB7A	82	39.306
ENSLBEG00000016417	rab11al	94	42.381	ENSLBEG00000022630	-	97	42.381
ENSLBEG00000016417	rab11al	74	40.252	ENSLBEG00000005128	-	71	40.252
ENSLBEG00000016417	rab11al	80	45.665	ENSLBEG00000026779	rab13	87	45.665
ENSLBEG00000016417	rab11al	79	37.288	ENSLBEG00000026777	rab33ba	76	37.288
ENSLBEG00000016417	rab11al	74	32.919	ENSLBEG00000014885	rheb	87	32.919
ENSLBEG00000016417	rab11al	83	37.363	ENSLBEG00000025798	zgc:101559	78	37.363
ENSLBEG00000016417	rab11al	99	86.047	ENSLBEG00000026857	rab11a	99	86.047
ENSLBEG00000016417	rab11al	86	37.297	ENSLBEG00000014427	rab33a	81	37.297
ENSLBEG00000016417	rab11al	55	41.026	ENSLBEG00000027819	rab34b	58	41.026
ENSLBEG00000016417	rab11al	80	32.759	ENSLBEG00000018812	RAB29	92	32.768
ENSLBEG00000016417	rab11al	95	43.541	ENSLBEG00000027226	-	89	43.541
ENSLBEG00000016417	rab11al	78	46.988	ENSLBEG00000001313	RAB39B	79	46.746
ENSLBEG00000016417	rab11al	78	40.828	ENSLBEG00000011478	rab9b	77	40.828
ENSLBEG00000016417	rab11al	94	31.373	ENSLBEG00000003748	rab6a	94	31.373
ENSLBEG00000016417	rab11al	74	33.962	ENSLBEG00000018180	si:dkey-13a21.4	78	33.962
ENSLBEG00000016417	rab11al	94	31.280	ENSLBEG00000026006	rab34a	77	31.280
ENSLBEG00000016417	rab11al	69	32.000	ENSLBEG00000003132	rras	83	32.948
ENSLBEG00000016417	rab11al	96	45.238	ENSLBEG00000027781	rab1ab	99	45.238
ENSLBEG00000016417	rab11al	79	53.333	ENSLBEG00000026790	-	80	52.023
ENSLBEG00000016417	rab11al	99	81.481	ENSLBEG00000006087	rab11ba	99	81.481
ENSLBEG00000016417	rab11al	88	33.158	ENSLBEG00000026930	rab6ba	91	33.158
ENSLBEG00000016417	rab11al	76	44.025	ENSLBEG00000026989	RAB15	75	44.025
ENSLBEG00000016417	rab11al	92	48.500	ENSLBEG00000020796	rab2a	99	46.190
ENSLBEG00000016417	rab11al	77	30.000	ENSLBEG00000020868	rasl11b	67	30.000
ENSLBEG00000016417	rab11al	77	53.614	ENSLBEG00000019435	rab14	77	53.614
ENSLBEG00000016417	rab11al	81	37.356	ENSLBEG00000015149	-	74	37.356
ENSLBEG00000016417	rab11al	80	32.759	ENSLBEG00000006152	-	85	32.571
ENSLBEG00000016417	rab11al	94	35.407	ENSLBEG00000020582	rab9a	97	35.407
ENSLBEG00000016417	rab11al	96	44.076	ENSLBEG00000005791	-	99	44.076
ENSLBEG00000016417	rab11al	98	60.664	ENSLBEG00000016446	rab25b	98	60.664
ENSLBEG00000016417	rab11al	96	43.128	ENSLBEG00000001618	rab35b	99	43.128
ENSLBEG00000016417	rab11al	94	35.714	ENSLBEG00000027691	RAB17	87	35.714
ENSLBEG00000016417	rab11al	75	35.032	ENSLBEG00000003644	rabl2	69	35.032
ENSLBEG00000016417	rab11al	79	43.373	ENSLBEG00000005861	rab18a	79	43.195
ENSLBEG00000016417	rab11al	95	47.573	ENSLBEG00000028426	RAB1A	99	47.573
ENSLBEG00000016417	rab11al	81	39.665	ENSLBEG00000013756	rab12	84	35.922
ENSLBEG00000016417	rab11al	99	74.419	ENSLBEG00000005981	-	99	74.419
ENSLBEG00000016417	rab11al	99	81.567	ENSLBEG00000015248	rab11bb	99	81.567
ENSLBEG00000016417	rab11al	80	39.306	ENSLBEG00000017798	-	82	39.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000016417	rab11al	100	94.444	ENSAPOG00000008251	rab11al	100	94.444	Acanthochromis_polyacanthus
ENSLBEG00000016417	rab11al	100	94.907	ENSACIG00000017403	rab11al	100	94.907	Amphilophus_citrinellus
ENSLBEG00000016417	rab11al	100	96.296	ENSAOCG00000015678	rab11al	100	96.296	Amphiprion_ocellaris
ENSLBEG00000016417	rab11al	100	96.296	ENSAPEG00000022135	rab11al	100	96.296	Amphiprion_percula
ENSLBEG00000016417	rab11al	100	94.444	ENSATEG00000006156	rab11al	100	94.444	Anabas_testudineus
ENSLBEG00000016417	rab11al	100	95.833	ENSACLG00000010268	rab11al	100	95.833	Astatotilapia_calliptera
ENSLBEG00000016417	rab11al	94	86.207	ENSAMXG00000024632	rab11al	93	86.207	Astyanax_mexicanus
ENSLBEG00000016417	rab11al	94	80.693	ENSCPBG00000025819	-	99	80.693	Chrysemys_picta_bellii
ENSLBEG00000016417	rab11al	100	96.296	ENSCSEG00000011996	rab11al	100	96.296	Cynoglossus_semilaevis
ENSLBEG00000016417	rab11al	100	93.056	ENSCVAG00000020016	rab11al	100	93.056	Cyprinodon_variegatus
ENSLBEG00000016417	rab11al	100	90.741	ENSDARG00000014340	rab11al	100	90.741	Danio_rerio
ENSLBEG00000016417	rab11al	100	92.130	ENSELUG00000012035	rab11al	100	92.130	Esox_lucius
ENSLBEG00000016417	rab11al	99	80.930	ENSFALG00000002594	-	91	80.930	Ficedula_albicollis
ENSLBEG00000016417	rab11al	96	93.750	ENSFHEG00000000832	rab11al	99	93.750	Fundulus_heteroclitus
ENSLBEG00000016417	rab11al	94	89.604	ENSGMOG00000006450	rab11al	100	89.604	Gadus_morhua
ENSLBEG00000016417	rab11al	99	78.605	ENSGALG00000037802	-	50	78.605	Gallus_gallus
ENSLBEG00000016417	rab11al	100	93.056	ENSGAFG00000021725	rab11al	100	93.056	Gambusia_affinis
ENSLBEG00000016417	rab11al	100	96.296	ENSGACG00000013259	rab11al	100	96.296	Gasterosteus_aculeatus
ENSLBEG00000016417	rab11al	99	80.930	ENSGAGG00000020702	-	99	80.930	Gopherus_agassizii
ENSLBEG00000016417	rab11al	100	95.833	ENSHBUG00000009333	rab11al	100	95.833	Haplochromis_burtoni
ENSLBEG00000016417	rab11al	100	93.519	ENSHCOG00000000232	rab11al	100	93.519	Hippocampus_comes
ENSLBEG00000016417	rab11al	100	92.130	ENSIPUG00000006091	RAB11A	100	92.130	Ictalurus_punctatus
ENSLBEG00000016417	rab11al	100	89.352	ENSKMAG00000015516	rab11al	100	89.352	Kryptolebias_marmoratus
ENSLBEG00000016417	rab11al	99	79.070	ENSLACG00000011380	rab11al	99	79.070	Latimeria_chalumnae
ENSLBEG00000016417	rab11al	100	92.130	ENSLOCG00000008865	rab11al	100	92.130	Lepisosteus_oculatus
ENSLBEG00000016417	rab11al	100	96.759	ENSMAMG00000010278	rab11al	100	96.759	Mastacembelus_armatus
ENSLBEG00000016417	rab11al	100	95.833	ENSMZEG00005017514	rab11al	100	95.833	Maylandia_zebra
ENSLBEG00000016417	rab11al	77	90.062	ENSMGAG00000004720	-	95	90.062	Meleagris_gallopavo
ENSLBEG00000016417	rab11al	91	87.179	ENSMMOG00000017117	rab11al	96	87.179	Mola_mola
ENSLBEG00000016417	rab11al	100	93.056	ENSMALG00000004093	rab11al	100	93.056	Monopterus_albus
ENSLBEG00000016417	rab11al	100	95.833	ENSNBRG00000005116	rab11al	100	95.833	Neolamprologus_brichardi
ENSLBEG00000016417	rab11al	100	95.370	ENSONIG00000002281	rab11al	100	95.370	Oreochromis_niloticus
ENSLBEG00000016417	rab11al	100	95.370	ENSORLG00000016126	rab11al	100	95.370	Oryzias_latipes
ENSLBEG00000016417	rab11al	100	95.370	ENSORLG00020013747	rab11al	100	95.370	Oryzias_latipes_hni
ENSLBEG00000016417	rab11al	100	95.370	ENSORLG00015019591	rab11al	100	95.370	Oryzias_latipes_hsok
ENSLBEG00000016417	rab11al	100	94.907	ENSOMEG00000020271	rab11al	100	94.907	Oryzias_melastigma
ENSLBEG00000016417	rab11al	100	88.889	ENSPKIG00000020893	rab11al	100	88.889	Paramormyrops_kingsleyae
ENSLBEG00000016417	rab11al	99	79.535	ENSPSIG00000013143	-	99	79.535	Pelodiscus_sinensis
ENSLBEG00000016417	rab11al	100	92.593	ENSPMGG00000004220	rab11al	100	92.593	Periophthalmus_magnuspinnatus
ENSLBEG00000016417	rab11al	100	93.056	ENSPFOG00000011316	rab11al	100	93.056	Poecilia_formosa
ENSLBEG00000016417	rab11al	100	93.056	ENSPLAG00000007986	rab11al	100	93.056	Poecilia_latipinna
ENSLBEG00000016417	rab11al	100	93.056	ENSPMEG00000000804	rab11al	100	93.056	Poecilia_mexicana
ENSLBEG00000016417	rab11al	100	93.056	ENSPREG00000017324	rab11al	100	93.056	Poecilia_reticulata
ENSLBEG00000016417	rab11al	100	95.833	ENSPNYG00000018244	rab11al	100	95.833	Pundamilia_nyererei
ENSLBEG00000016417	rab11al	100	92.130	ENSPNAG00000029085	rab11al	100	92.130	Pygocentrus_nattereri
ENSLBEG00000016417	rab11al	100	89.815	ENSSFOG00015008618	rab11al	100	89.815	Scleropages_formosus
ENSLBEG00000016417	rab11al	100	94.907	ENSSMAG00000016206	rab11al	100	94.907	Scophthalmus_maximus
ENSLBEG00000016417	rab11al	100	96.296	ENSSDUG00000006278	rab11al	100	96.296	Seriola_dumerili
ENSLBEG00000016417	rab11al	100	96.296	ENSSLDG00000012116	rab11al	100	96.296	Seriola_lalandi_dorsalis
ENSLBEG00000016417	rab11al	99	78.704	ENSSPUG00000002526	-	99	78.704	Sphenodon_punctatus
ENSLBEG00000016417	rab11al	100	94.907	ENSSPAG00000012044	rab11al	100	94.907	Stegastes_partitus
ENSLBEG00000016417	rab11al	94	83.168	ENSTGUG00000003680	-	99	83.168	Taeniopygia_guttata
ENSLBEG00000016417	rab11al	99	93.925	ENSTRUG00000007556	rab11al	99	93.925	Takifugu_rubripes
ENSLBEG00000016417	rab11al	100	92.130	ENSXCOG00000004226	rab11al	100	92.130	Xiphophorus_couchianus
ENSLBEG00000016417	rab11al	100	92.130	ENSXMAG00000027071	rab11al	100	92.130	Xiphophorus_maculatus