EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000016460 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: la-related protein 6-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 7116 bases
Position: chrFKLU01000002.1:2199064-2206179
Accession: 109978989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000021452	La	PF05383.17	8.7e-13	1	1
ENSLBEP00000021446	La	PF05383.17	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000022598	-	1296	-	ENSLBEP00000021446	431 (aa)	-	-
ENSLBET00000022604	-	1080	XM_020628133	ENSLBEP00000021452	359 (aa)	XP_020483789	-

Gene Model

Click here to download ENSLBEG00000016460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000016460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000016460	-	98	57.923	ENSAPOG00000003568	-	93	57.923	Acanthochromis_polyacanthus
ENSLBEG00000016460	-	96	59.773	ENSACIG00000008349	-	82	59.718	Amphilophus_citrinellus
ENSLBEG00000016460	-	99	62.228	ENSAOCG00000004646	larp6b	93	62.772	Amphiprion_ocellaris
ENSLBEG00000016460	-	99	62.500	ENSAPEG00000022748	-	92	62.500	Amphiprion_percula
ENSLBEG00000016460	-	96	65.449	ENSATEG00000021222	-	89	65.449	Anabas_testudineus
ENSLBEG00000016460	-	97	57.778	ENSACLG00000009988	larp6b	90	58.449	Astatotilapia_calliptera
ENSLBEG00000016460	-	60	48.276	ENSAMXG00000018956	larp6b	80	38.407	Astyanax_mexicanus
ENSLBEG00000016460	-	58	31.905	ENSCING00000018361	-	71	31.905	Ciona_intestinalis
ENSLBEG00000016460	-	50	31.111	ENSCING00000024994	-	59	31.111	Ciona_intestinalis
ENSLBEG00000016460	-	50	40.984	ENSCSAVG00000011718	-	70	39.151	Ciona_savignyi
ENSLBEG00000016460	-	97	48.603	ENSCVAG00000012145	-	88	48.732	Cyprinodon_variegatus
ENSLBEG00000016460	-	74	48.696	ENSDARG00000003968	larp6b	74	50.505	Danio_rerio
ENSLBEG00000016460	-	75	50.769	ENSELUG00000021677	larp6b	58	50.769	Esox_lucius
ENSLBEG00000016460	-	99	54.017	ENSFHEG00000010409	-	84	54.017	Fundulus_heteroclitus
ENSLBEG00000016460	-	96	54.674	ENSGAFG00000020138	-	86	54.674	Gambusia_affinis
ENSLBEG00000016460	-	97	57.222	ENSHBUG00000012344	larp6b	90	58.011	Haplochromis_burtoni
ENSLBEG00000016460	-	69	53.030	ENSIPUG00000007609	larp6b	84	38.832	Ictalurus_punctatus
ENSLBEG00000016460	-	99	65.041	ENSMAMG00000005509	-	91	65.041	Mastacembelus_armatus
ENSLBEG00000016460	-	97	57.500	ENSMZEG00005024390	larp6b	90	58.172	Maylandia_zebra
ENSLBEG00000016460	-	99	57.576	ENSNBRG00000012748	larp6b	91	57.576	Neolamprologus_brichardi
ENSLBEG00000016460	-	96	54.416	ENSPLAG00000005133	-	94	54.416	Poecilia_latipinna
ENSLBEG00000016460	-	98	53.631	ENSPMEG00000019947	-	97	53.631	Poecilia_mexicana
ENSLBEG00000016460	-	98	53.994	ENSPREG00000011853	-	86	54.167	Poecilia_reticulata
ENSLBEG00000016460	-	97	56.438	ENSPNYG00000007025	larp6b	86	57.895	Pundamilia_nyererei
ENSLBEG00000016460	-	93	38.557	ENSPNAG00000023854	larp6b	83	38.557	Pygocentrus_nattereri
ENSLBEG00000016460	-	74	65.217	ENSSDUG00000009842	-	88	63.014	Seriola_dumerili
ENSLBEG00000016460	-	94	63.533	ENSSLDG00000017081	-	92	56.381	Seriola_lalandi_dorsalis
ENSLBEG00000016460	-	97	61.308	ENSSPAG00000014320	-	89	61.186	Stegastes_partitus
ENSLBEG00000016460	-	98	54.294	ENSXCOG00000018917	-	92	54.469	Xiphophorus_couchianus
ENSLBEG00000016460	-	99	53.973	ENSXMAG00000025734	-	96	53.226	Xiphophorus_maculatus