EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000016666 (Gene tree)
Gene ID: 109985588
Gene Symbol: znf341
Alias: zgc:171837
Full Name: zinc finger protein 341
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 10079 bases
Position: chrFKLU01000084.1:1253077-1263155
Accession: 109985588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000021676	zf-C2H2	PF00096.26	3.3e-27	1	6
ENSLBEP00000021676	zf-C2H2	PF00096.26	3.3e-27	2	6
ENSLBEP00000021676	zf-C2H2	PF00096.26	3.3e-27	3	6
ENSLBEP00000021676	zf-C2H2	PF00096.26	3.3e-27	4	6
ENSLBEP00000021676	zf-C2H2	PF00096.26	3.3e-27	5	6
ENSLBEP00000021676	zf-C2H2	PF00096.26	3.3e-27	6	6
ENSLBEP00000021676	zf-met	PF12874.7	2.8e-09	1	2
ENSLBEP00000021676	zf-met	PF12874.7	2.8e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000022837	-	3421	XM_020635991	ENSLBEP00000021676	928 (aa)	XP_020491647	UPI0009B4D37B

Gene Model

Click here to download ENSLBEG00000016666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000016666's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000016666	znf341	53	38.889	ENSLBEG00000011091	si:cabz01071911.3	96	46.939
ENSLBEG00000016666	znf341	50	46.429	ENSLBEG00000008606	-	92	47.826
ENSLBEG00000016666	znf341	52	47.059	ENSLBEG00000024509	-	98	49.020
ENSLBEG00000016666	znf341	52	41.176	ENSLBEG00000017450	-	86	44.898
ENSLBEG00000016666	znf341	54	38.028	ENSLBEG00000018509	-	89	46.000
ENSLBEG00000016666	znf341	52	30.566	ENSLBEG00000005715	-	75	30.566
ENSLBEG00000016666	znf341	51	30.769	ENSLBEG00000013235	-	75	46.000
ENSLBEG00000016666	znf341	53	43.137	ENSLBEG00000011751	znf526	64	43.860
ENSLBEG00000016666	znf341	50	46.939	ENSLBEG00000015264	-	77	46.939
ENSLBEG00000016666	znf341	52	41.818	ENSLBEG00000028243	-	83	41.818
ENSLBEG00000016666	znf341	51	46.429	ENSLBEG00000020747	-	89	46.429
ENSLBEG00000016666	znf341	52	39.394	ENSLBEG00000011465	-	88	39.394
ENSLBEG00000016666	znf341	50	32.283	ENSLBEG00000009567	-	69	45.763
ENSLBEG00000016666	znf341	55	43.103	ENSLBEG00000025689	-	67	46.939
ENSLBEG00000016666	znf341	51	42.593	ENSLBEG00000026457	-	92	46.939
ENSLBEG00000016666	znf341	50	44.643	ENSLBEG00000001756	-	96	44.262
ENSLBEG00000016666	znf341	50	45.098	ENSLBEG00000010278	-	96	46.000
ENSLBEG00000016666	znf341	51	41.791	ENSLBEG00000007837	-	82	45.098
ENSLBEG00000016666	znf341	63	38.095	ENSLBEG00000024737	-	92	41.509
ENSLBEG00000016666	znf341	52	45.312	ENSLBEG00000011028	-	73	45.312
ENSLBEG00000016666	znf341	52	53.061	ENSLBEG00000005307	znf236	70	57.143
ENSLBEG00000016666	znf341	54	42.105	ENSLBEG00000002357	-	97	44.828
ENSLBEG00000016666	znf341	54	42.593	ENSLBEG00000009580	-	82	42.593
ENSLBEG00000016666	znf341	50	51.064	ENSLBEG00000014211	-	85	46.939
ENSLBEG00000016666	znf341	51	46.429	ENSLBEG00000015694	-	84	46.429
ENSLBEG00000016666	znf341	57	32.374	ENSLBEG00000012438	ZNF319	87	47.059
ENSLBEG00000016666	znf341	60	43.396	ENSLBEG00000001132	-	96	43.396
ENSLBEG00000016666	znf341	51	46.429	ENSLBEG00000008115	-	90	46.939
ENSLBEG00000016666	znf341	50	31.443	ENSLBEG00000018970	-	78	44.643
ENSLBEG00000016666	znf341	51	30.729	ENSLBEG00000000373	-	73	45.098
ENSLBEG00000016666	znf341	50	48.077	ENSLBEG00000020128	-	95	48.077
ENSLBEG00000016666	znf341	50	49.020	ENSLBEG00000008689	-	85	48.980
ENSLBEG00000016666	znf341	50	50.000	ENSLBEG00000013570	-	99	50.000
ENSLBEG00000016666	znf341	51	31.579	ENSLBEG00000022736	prdm5	75	51.786
ENSLBEG00000016666	znf341	52	42.857	ENSLBEG00000004833	-	70	43.137
ENSLBEG00000016666	znf341	52	30.584	ENSLBEG00000011986	-	89	47.368
ENSLBEG00000016666	znf341	50	46.512	ENSLBEG00000010165	-	89	46.512
ENSLBEG00000016666	znf341	53	30.729	ENSLBEG00000000435	-	76	42.553

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000016666	znf341	100	80.676	ENSAPOG00000016509	znf341	100	80.252	Acanthochromis_polyacanthus
ENSLBEG00000016666	znf341	100	51.001	ENSACIG00000016180	znf341	100	80.365	Amphilophus_citrinellus
ENSLBEG00000016666	znf341	100	81.033	ENSAOCG00000000960	znf341	98	80.421	Amphiprion_ocellaris
ENSLBEG00000016666	znf341	100	81.270	ENSAPEG00000006358	znf341	98	81.395	Amphiprion_percula
ENSLBEG00000016666	znf341	100	82.196	ENSATEG00000003196	znf341	100	81.828	Anabas_testudineus
ENSLBEG00000016666	znf341	100	77.614	ENSACLG00000014349	znf341	100	77.368	Astatotilapia_calliptera
ENSLBEG00000016666	znf341	87	68.473	ENSAMXG00000016921	znf341	89	68.539	Astyanax_mexicanus
ENSLBEG00000016666	znf341	90	50.407	ENSCSEG00000003536	znf341	88	91.030	Cynoglossus_semilaevis
ENSLBEG00000016666	znf341	99	73.894	ENSCVAG00000016325	znf341	99	73.427	Cyprinodon_variegatus
ENSLBEG00000016666	znf341	89	67.312	ENSDARG00000103725	znf341	89	68.369	Danio_rerio
ENSLBEG00000016666	znf341	89	68.530	ENSELUG00000018438	znf341	88	89.769	Esox_lucius
ENSLBEG00000016666	znf341	100	73.913	ENSFHEG00000009763	znf341	100	74.468	Fundulus_heteroclitus
ENSLBEG00000016666	znf341	100	75.211	ENSGAFG00000020131	znf341	100	74.789	Gambusia_affinis
ENSLBEG00000016666	znf341	100	77.532	ENSHBUG00000012828	znf341	100	77.497	Haplochromis_burtoni
ENSLBEG00000016666	znf341	97	73.208	ENSHCOG00000004879	znf341	93	76.241	Hippocampus_comes
ENSLBEG00000016666	znf341	92	64.228	ENSIPUG00000002075	znf341	88	66.916	Ictalurus_punctatus
ENSLBEG00000016666	znf341	100	75.789	ENSKMAG00000006686	znf341	100	74.789	Kryptolebias_marmoratus
ENSLBEG00000016666	znf341	92	67.596	ENSLOCG00000000947	znf341	89	70.654	Lepisosteus_oculatus
ENSLBEG00000016666	znf341	100	81.017	ENSMAMG00000008000	znf341	100	80.324	Mastacembelus_armatus
ENSLBEG00000016666	znf341	100	77.719	ENSMZEG00005021851	znf341	100	77.474	Maylandia_zebra
ENSLBEG00000016666	znf341	88	51.621	ENSMMOG00000019626	znf341	92	92.739	Mola_mola
ENSLBEG00000016666	znf341	86	56.350	ENSMODG00000002856	ZNF341	87	56.473	Monodelphis_domestica
ENSLBEG00000016666	znf341	87	87.745	ENSMALG00000006492	znf341	96	87.021	Monopterus_albus
ENSLBEG00000016666	znf341	100	78.714	ENSONIG00000009210	znf341	100	78.466	Oreochromis_niloticus
ENSLBEG00000016666	znf341	96	62.905	ENSORLG00000000956	znf341	99	74.447	Oryzias_latipes
ENSLBEG00000016666	znf341	100	73.319	ENSORLG00020004162	znf341	93	77.896	Oryzias_latipes_hni
ENSLBEG00000016666	znf341	100	75.829	ENSOMEG00000014403	znf341	100	75.054	Oryzias_melastigma
ENSLBEG00000016666	znf341	99	64.192	ENSPKIG00000023946	znf341	86	69.413	Paramormyrops_kingsleyae
ENSLBEG00000016666	znf341	90	74.118	ENSPMGG00000014849	znf341	100	59.375	Periophthalmus_magnuspinnatus
ENSLBEG00000016666	znf341	100	75.716	ENSPFOG00000013875	znf341	100	74.974	Poecilia_formosa
ENSLBEG00000016666	znf341	100	75.610	ENSPLAG00000014192	znf341	100	74.974	Poecilia_latipinna
ENSLBEG00000016666	znf341	100	75.292	ENSPMEG00000020155	znf341	100	74.551	Poecilia_mexicana
ENSLBEG00000016666	znf341	100	73.774	ENSPREG00000001388	znf341	91	78.738	Poecilia_reticulata
ENSLBEG00000016666	znf341	100	73.734	ENSPNYG00000015106	znf341	100	73.207	Pundamilia_nyererei
ENSLBEG00000016666	znf341	88	68.176	ENSPNAG00000027229	znf341	88	68.561	Pygocentrus_nattereri
ENSLBEG00000016666	znf341	87	70.632	ENSSFOG00015014678	znf341	86	71.072	Scleropages_formosus
ENSLBEG00000016666	znf341	100	76.074	ENSSMAG00000006473	znf341	100	75.460	Scophthalmus_maximus
ENSLBEG00000016666	znf341	100	75.761	ENSSDUG00000014540	znf341	100	76.155	Seriola_dumerili
ENSLBEG00000016666	znf341	100	76.180	ENSSLDG00000019660	znf341	100	75.105	Seriola_lalandi_dorsalis
ENSLBEG00000016666	znf341	97	78.007	ENSTRUG00000011385	znf341	100	77.248	Takifugu_rubripes
ENSLBEG00000016666	znf341	86	79.526	ENSTNIG00000005051	znf341	100	78.527	Tetraodon_nigroviridis
ENSLBEG00000016666	znf341	75	74.330	ENSXCOG00000000036	znf341	88	73.475	Xiphophorus_couchianus
ENSLBEG00000016666	znf341	100	76.101	ENSXMAG00000014133	znf341	100	75.975	Xiphophorus_maculatus