EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000016719 (Gene tree)
Gene ID: -
Gene Symbol: POLR2B
Alias: RPB2
Full Name: RNA polymerase II subunit B
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3740 bases
Position: chrFKLU01001694.1:8630-12369
Accession: 9188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000021787	RNA_pol_Rpb2_1	PF04563.15	2.7e-58	1	1
ENSLBEP00000021787	RNA_pol_Rpb2_2	PF04561.14	6e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000022952	POLR2B-201	1101	-	ENSLBEP00000021787	366 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000016719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000016719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000016719	POLR2B	100	100.000	ENSLBEG00000010055	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000016719	POLR2B	100	96.448	ENSG00000047315	POLR2B	100	95.312	Homo_sapiens
ENSLBEG00000016719	POLR2B	61	95.982	ENSDARG00000104434	CABZ01048453.1	92	95.982	Danio_rerio
ENSLBEG00000016719	POLR2B	100	98.361	ENSDARG00000098783	polr2b	100	98.361	Danio_rerio
ENSLBEG00000016719	POLR2B	100	99.454	ENSGAFG00000016504	POLR2B	100	99.454	Gambusia_affinis
ENSLBEG00000016719	POLR2B	52	38.220	ENSMGAG00000012873	-	74	38.220	Meleagris_gallopavo
ENSLBEG00000016719	POLR2B	90	33.333	ENSMUSG00000034453	Polr3b	54	32.000	Mus_musculus
ENSLBEG00000016719	POLR2B	87	82.075	ENSSPUG00000018434	-	90	82.075	Sphenodon_punctatus
ENSLBEG00000016719	POLR2B	74	32.616	ENSSPUG00000004872	-	82	32.616	Sphenodon_punctatus
ENSLBEG00000016719	POLR2B	96	31.564	ENSSPAG00000008931	polr3b	80	31.564	Stegastes_partitus
ENSLBEG00000016719	POLR2B	53	98.964	ENSTRUG00000019743	polr2b	80	98.964	Takifugu_rubripes
ENSLBEG00000016719	POLR2B	70	33.077	ENSTNIG00000012124	-	88	33.077	Tetraodon_nigroviridis
ENSLBEG00000016719	POLR2B	100	99.454	ENSXCOG00000014657	POLR2B	100	99.454	Xiphophorus_couchianus