EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000016876 (Gene tree)
Gene ID: 109998255
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 11235 bases
Position: chrFKLU01000471.1:72489-83723
Accession: 109998255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000021966	zf-RanBP	PF00641.18	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023133	-	3319	XM_020653036	ENSLBEP00000021966	710 (aa)	XP_020508692	UPI0009B47312

Gene Model

Click here to download ENSLBEG00000016876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000016876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000016876	shrprbck1r	60	58.102	ENSLBEG00000016624	sharpin	95	56.944

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000016876	shrprbck1r	60	57.442	ENSAPOG00000023352	sharpin	95	56.279	Acanthochromis_polyacanthus
ENSLBEG00000016876	shrprbck1r	100	85.298	ENSAPOG00000022737	shrprbck1r	100	85.021	Acanthochromis_polyacanthus
ENSLBEG00000016876	shrprbck1r	100	83.826	ENSACIG00000002184	shrprbck1r	100	83.826	Amphilophus_citrinellus
ENSLBEG00000016876	shrprbck1r	60	57.674	ENSAOCG00000017464	sharpin	95	56.512	Amphiprion_ocellaris
ENSLBEG00000016876	shrprbck1r	100	87.518	ENSAOCG00000002890	shrprbck1r	100	87.377	Amphiprion_ocellaris
ENSLBEG00000016876	shrprbck1r	60	57.674	ENSAPEG00000004049	sharpin	95	56.512	Amphiprion_percula
ENSLBEG00000016876	shrprbck1r	100	85.714	ENSAPEG00000023274	shrprbck1r	100	85.574	Amphiprion_percula
ENSLBEG00000016876	shrprbck1r	60	58.974	ENSATEG00000007832	sharpin	87	57.809	Anabas_testudineus
ENSLBEG00000016876	shrprbck1r	100	85.493	ENSATEG00000014561	shrprbck1r	100	85.493	Anabas_testudineus
ENSLBEG00000016876	shrprbck1r	100	84.388	ENSACLG00000022609	shrprbck1r	100	84.388	Astatotilapia_calliptera
ENSLBEG00000016876	shrprbck1r	100	69.837	ENSAMXG00000021016	shrprbck1r	100	70.451	Astyanax_mexicanus
ENSLBEG00000016876	shrprbck1r	55	56.777	ENSAMXG00000006229	sharpin	97	56.777	Astyanax_mexicanus
ENSLBEG00000016876	shrprbck1r	100	78.511	ENSCSEG00000011306	shrprbck1r	100	78.511	Cynoglossus_semilaevis
ENSLBEG00000016876	shrprbck1r	65	52.891	ENSCVAG00000006586	sharpin	99	52.463	Cyprinodon_variegatus
ENSLBEG00000016876	shrprbck1r	100	80.141	ENSCVAG00000007250	shrprbck1r	100	79.437	Cyprinodon_variegatus
ENSLBEG00000016876	shrprbck1r	55	55.754	ENSDARG00000076995	sharpin	94	55.243	Danio_rerio
ENSLBEG00000016876	shrprbck1r	100	71.468	ENSDARG00000059871	shrprbck1r	100	71.468	Danio_rerio
ENSLBEG00000016876	shrprbck1r	100	75.346	ENSELUG00000016022	shrprbck1r	100	75.208	Esox_lucius
ENSLBEG00000016876	shrprbck1r	65	52.137	ENSFHEG00000013564	sharpin	98	51.282	Fundulus_heteroclitus
ENSLBEG00000016876	shrprbck1r	53	58.610	ENSGMOG00000010123	sharpin	93	58.610	Gadus_morhua
ENSLBEG00000016876	shrprbck1r	100	80.000	ENSGAFG00000009309	shrprbck1r	100	79.296	Gambusia_affinis
ENSLBEG00000016876	shrprbck1r	59	44.366	ENSGAFG00000021405	sharpin	95	43.953	Gambusia_affinis
ENSLBEG00000016876	shrprbck1r	75	83.459	ENSGACG00000002544	shrprbck1r	100	83.459	Gasterosteus_aculeatus
ENSLBEG00000016876	shrprbck1r	100	84.388	ENSHBUG00000021933	shrprbck1r	100	84.388	Haplochromis_burtoni
ENSLBEG00000016876	shrprbck1r	60	53.521	ENSHCOG00000018847	sharpin	80	52.304	Hippocampus_comes
ENSLBEG00000016876	shrprbck1r	50	72.973	ENSIPUG00000011951	sharpin	97	72.973	Ictalurus_punctatus
ENSLBEG00000016876	shrprbck1r	96	69.308	ENSIPUG00000014247	shrprbck1r	100	67.034	Ictalurus_punctatus
ENSLBEG00000016876	shrprbck1r	100	79.806	ENSKMAG00000015215	shrprbck1r	100	79.530	Kryptolebias_marmoratus
ENSLBEG00000016876	shrprbck1r	60	56.410	ENSKMAG00000015204	sharpin	76	55.944	Kryptolebias_marmoratus
ENSLBEG00000016876	shrprbck1r	95	53.353	ENSLACG00000010948	-	97	53.207	Latimeria_chalumnae
ENSLBEG00000016876	shrprbck1r	100	68.975	ENSLOCG00000008910	shrprbck1r	100	69.391	Lepisosteus_oculatus
ENSLBEG00000016876	shrprbck1r	100	83.380	ENSMAMG00000022930	shrprbck1r	100	83.380	Mastacembelus_armatus
ENSLBEG00000016876	shrprbck1r	51	67.742	ENSMAMG00000014645	sharpin	92	67.742	Mastacembelus_armatus
ENSLBEG00000016876	shrprbck1r	100	84.248	ENSMZEG00005021257	shrprbck1r	100	84.248	Maylandia_zebra
ENSLBEG00000016876	shrprbck1r	100	82.427	ENSMMOG00000003764	shrprbck1r	100	82.427	Mola_mola
ENSLBEG00000016876	shrprbck1r	51	67.742	ENSMALG00000020528	sharpin	93	67.742	Monopterus_albus
ENSLBEG00000016876	shrprbck1r	95	84.786	ENSMALG00000008861	shrprbck1r	95	84.786	Monopterus_albus
ENSLBEG00000016876	shrprbck1r	100	84.388	ENSNBRG00000002270	shrprbck1r	100	84.388	Neolamprologus_brichardi
ENSLBEG00000016876	shrprbck1r	55	55.663	ENSONIG00000009626	-	97	54.699	Oreochromis_niloticus
ENSLBEG00000016876	shrprbck1r	100	84.107	ENSONIG00000014401	shrprbck1r	100	84.107	Oreochromis_niloticus
ENSLBEG00000016876	shrprbck1r	100	79.437	ENSORLG00000007392	shrprbck1r	100	78.732	Oryzias_latipes
ENSLBEG00000016876	shrprbck1r	60	56.613	ENSORLG00000017281	sharpin	95	55.452	Oryzias_latipes
ENSLBEG00000016876	shrprbck1r	60	56.381	ENSORLG00020000801	sharpin	95	55.220	Oryzias_latipes_hni
ENSLBEG00000016876	shrprbck1r	100	79.155	ENSORLG00020018619	shrprbck1r	100	78.451	Oryzias_latipes_hni
ENSLBEG00000016876	shrprbck1r	60	56.381	ENSORLG00015009860	sharpin	95	55.220	Oryzias_latipes_hsok
ENSLBEG00000016876	shrprbck1r	100	78.873	ENSORLG00015018865	shrprbck1r	100	78.732	Oryzias_latipes_hsok
ENSLBEG00000016876	shrprbck1r	52	62.857	ENSOMEG00000005729	sharpin	88	62.857	Oryzias_melastigma
ENSLBEG00000016876	shrprbck1r	100	80.282	ENSOMEG00000012749	shrprbck1r	100	79.577	Oryzias_melastigma
ENSLBEG00000016876	shrprbck1r	100	72.106	ENSPKIG00000006933	shrprbck1r	100	71.827	Paramormyrops_kingsleyae
ENSLBEG00000016876	shrprbck1r	65	60.593	ENSPKIG00000018308	-	96	59.746	Paramormyrops_kingsleyae
ENSLBEG00000016876	shrprbck1r	100	77.215	ENSPMGG00000013254	shrprbck1r	100	77.075	Periophthalmus_magnuspinnatus
ENSLBEG00000016876	shrprbck1r	59	54.419	ENSPFOG00000015253	sharpin	95	53.917	Poecilia_formosa
ENSLBEG00000016876	shrprbck1r	100	80.563	ENSPFOG00000004214	shrprbck1r	100	80.000	Poecilia_formosa
ENSLBEG00000016876	shrprbck1r	100	80.423	ENSPLAG00000020523	shrprbck1r	100	79.859	Poecilia_latipinna
ENSLBEG00000016876	shrprbck1r	59	54.651	ENSPLAG00000000423	sharpin	95	54.147	Poecilia_latipinna
ENSLBEG00000016876	shrprbck1r	100	78.911	ENSPMEG00000006877	shrprbck1r	100	78.352	Poecilia_mexicana
ENSLBEG00000016876	shrprbck1r	100	78.873	ENSPREG00000014689	shrprbck1r	100	78.310	Poecilia_reticulata
ENSLBEG00000016876	shrprbck1r	65	52.137	ENSPREG00000009702	sharpin	99	51.695	Poecilia_reticulata
ENSLBEG00000016876	shrprbck1r	100	84.810	ENSPNYG00000022601	shrprbck1r	100	84.810	Pundamilia_nyererei
ENSLBEG00000016876	shrprbck1r	100	68.904	ENSPNAG00000007847	shrprbck1r	100	69.083	Pygocentrus_nattereri
ENSLBEG00000016876	shrprbck1r	55	55.128	ENSPNAG00000002911	sharpin	99	55.243	Pygocentrus_nattereri
ENSLBEG00000016876	shrprbck1r	63	53.768	ENSSFOG00015004028	sharpin	99	54.183	Scleropages_formosus
ENSLBEG00000016876	shrprbck1r	75	64.299	ENSSFOG00015014150	-	96	64.299	Scleropages_formosus
ENSLBEG00000016876	shrprbck1r	100	82.754	ENSSMAG00000018085	shrprbck1r	100	82.754	Scophthalmus_maximus
ENSLBEG00000016876	shrprbck1r	60	43.596	ENSSDUG00000019039	sharpin	96	42.472	Seriola_dumerili
ENSLBEG00000016876	shrprbck1r	100	88.451	ENSSDUG00000002959	shrprbck1r	100	88.451	Seriola_dumerili
ENSLBEG00000016876	shrprbck1r	100	88.028	ENSSLDG00000009026	shrprbck1r	100	88.028	Seriola_lalandi_dorsalis
ENSLBEG00000016876	shrprbck1r	96	84.783	ENSSPAG00000016097	shrprbck1r	99	84.493	Stegastes_partitus
ENSLBEG00000016876	shrprbck1r	100	82.022	ENSTRUG00000006949	shrprbck1r	100	82.022	Takifugu_rubripes
ENSLBEG00000016876	shrprbck1r	60	52.204	ENSTRUG00000011046	sharpin	96	52.336	Takifugu_rubripes
ENSLBEG00000016876	shrprbck1r	55	57.463	ENSTNIG00000008521	sharpin	94	56.468	Tetraodon_nigroviridis
ENSLBEG00000016876	shrprbck1r	51	55.319	ENSXCOG00000015019	sharpin	91	76.923	Xiphophorus_couchianus
ENSLBEG00000016876	shrprbck1r	100	77.778	ENSXCOG00000006701	shrprbck1r	100	77.215	Xiphophorus_couchianus
ENSLBEG00000016876	shrprbck1r	100	77.637	ENSXMAG00000018972	shrprbck1r	100	77.075	Xiphophorus_maculatus
ENSLBEG00000016876	shrprbck1r	65	52.766	ENSXMAG00000022076	sharpin	99	52.321	Xiphophorus_maculatus