EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000016945 (Gene tree)
Gene ID: 109996047
Gene Symbol: -
Alias: -
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3828 bases
Position: chrFKLU01000350.1:81016-84843
Accession: 109996047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022065	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023233	-	729	XM_020649988	ENSLBEP00000022065	198 (aa)	XP_020505644	UPI0009B40A3B

Gene Model

Click here to download ENSLBEG00000016945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000016945's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000016945	-	89	31.844	ENSLBEG00000027842	-	82	31.844
ENSLBEG00000016945	-	71	34.722	ENSLBEG00000024782	ARF6	77	34.722
ENSLBEG00000016945	-	86	30.409	ENSLBEG00000027205	-	89	30.409
ENSLBEG00000016945	-	64	34.351	ENSLBEG00000011152	arl4d	66	34.351
ENSLBEG00000016945	-	84	31.765	ENSLBEG00000021116	arl14	75	31.765
ENSLBEG00000016945	-	89	31.638	ENSLBEG00000000991	arl1	94	31.638
ENSLBEG00000016945	-	86	30.409	ENSLBEG00000017331	-	91	30.409
ENSLBEG00000016945	-	100	83.838	ENSLBEG00000001114	sar1ab	100	83.838
ENSLBEG00000016945	-	87	30.636	ENSLBEG00000012002	-	89	30.636
ENSLBEG00000016945	-	95	31.746	ENSLBEG00000027806	arl3l2	95	31.746
ENSLBEG00000016945	-	66	35.294	ENSLBEG00000010335	-	70	35.294
ENSLBEG00000016945	-	94	31.579	ENSLBEG00000010881	ARL6	93	31.579
ENSLBEG00000016945	-	72	34.459	ENSLBEG00000012677	arl4cb	74	34.459
ENSLBEG00000016945	-	87	31.395	ENSLBEG00000026532	arf5	89	31.395
ENSLBEG00000016945	-	100	82.323	ENSLBEG00000027550	sar1b	100	82.323
ENSLBEG00000016945	-	87	31.395	ENSLBEG00000001998	arf1	90	31.395
ENSLBEG00000016945	-	84	30.357	ENSLBEG00000015748	arl11	88	30.357
ENSLBEG00000016945	-	58	38.655	ENSLBEG00000013638	arl4aa	65	38.655
ENSLBEG00000016945	-	91	30.939	ENSLBEG00000009272	arf2b	93	30.939
ENSLBEG00000016945	-	93	32.609	ENSLBEG00000023263	-	94	32.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000016945	-	100	85.354	ENSAPOG00000007186	sar1b	100	85.354	Acanthochromis_polyacanthus
ENSLBEG00000016945	-	100	97.980	ENSAPOG00000017891	-	100	97.980	Acanthochromis_polyacanthus
ENSLBEG00000016945	-	100	96.970	ENSACIG00000024513	-	100	96.970	Amphilophus_citrinellus
ENSLBEG00000016945	-	100	86.364	ENSACIG00000013634	sar1b	100	86.364	Amphilophus_citrinellus
ENSLBEG00000016945	-	100	97.980	ENSAOCG00000002627	-	100	97.980	Amphiprion_ocellaris
ENSLBEG00000016945	-	100	84.848	ENSAOCG00000005888	sar1b	100	84.848	Amphiprion_ocellaris
ENSLBEG00000016945	-	100	84.848	ENSAPEG00000022771	sar1b	100	84.848	Amphiprion_percula
ENSLBEG00000016945	-	100	97.980	ENSAPEG00000019680	-	100	97.980	Amphiprion_percula
ENSLBEG00000016945	-	100	83.838	ENSATEG00000012904	sar1b	100	83.838	Anabas_testudineus
ENSLBEG00000016945	-	100	94.444	ENSATEG00000023368	-	100	94.444	Anabas_testudineus
ENSLBEG00000016945	-	100	84.848	ENSACAG00000001470	-	100	84.848	Anolis_carolinensis
ENSLBEG00000016945	-	100	85.859	ENSACLG00000014649	sar1b	100	85.859	Astatotilapia_calliptera
ENSLBEG00000016945	-	100	97.475	ENSACLG00000005011	-	100	97.475	Astatotilapia_calliptera
ENSLBEG00000016945	-	100	89.394	ENSAMXG00000034192	-	91	89.394	Astyanax_mexicanus
ENSLBEG00000016945	-	59	92.308	ENSAMXG00000018108	sar1b	84	92.308	Astyanax_mexicanus
ENSLBEG00000016945	-	100	80.303	ENSCSEG00000015238	sar1b	97	80.303	Cynoglossus_semilaevis
ENSLBEG00000016945	-	100	92.424	ENSCSEG00000016976	-	100	92.424	Cynoglossus_semilaevis
ENSLBEG00000016945	-	100	87.374	ENSCVAG00000022959	sar1b	100	87.374	Cyprinodon_variegatus
ENSLBEG00000016945	-	100	86.869	ENSDARG00000103403	sar1b	100	86.869	Danio_rerio
ENSLBEG00000016945	-	99	68.878	FBgn0038947	Sar1	99	68.878	Drosophila_melanogaster
ENSLBEG00000016945	-	97	81.250	ENSEBUG00000011723	sar1b	97	81.250	Eptatretus_burgeri
ENSLBEG00000016945	-	100	87.879	ENSELUG00000020912	sar1b	100	87.879	Esox_lucius
ENSLBEG00000016945	-	100	86.364	ENSFHEG00000019865	sar1b	100	86.364	Fundulus_heteroclitus
ENSLBEG00000016945	-	100	86.364	ENSGMOG00000008023	sar1b	100	86.364	Gadus_morhua
ENSLBEG00000016945	-	100	84.848	ENSGAFG00000007081	sar1b	100	84.848	Gambusia_affinis
ENSLBEG00000016945	-	100	83.333	ENSGACG00000001474	sar1b	100	83.333	Gasterosteus_aculeatus
ENSLBEG00000016945	-	100	97.475	ENSHBUG00000018397	-	100	97.475	Haplochromis_burtoni
ENSLBEG00000016945	-	100	85.859	ENSHBUG00000000915	sar1b	100	85.859	Haplochromis_burtoni
ENSLBEG00000016945	-	100	84.848	ENSHCOG00000010953	sar1b	100	84.848	Hippocampus_comes
ENSLBEG00000016945	-	100	89.394	ENSIPUG00000010046	sar1b	100	89.394	Ictalurus_punctatus
ENSLBEG00000016945	-	100	85.354	ENSIPUG00000020925	sar1b	100	85.354	Ictalurus_punctatus
ENSLBEG00000016945	-	100	91.919	ENSKMAG00000014875	-	100	91.919	Kryptolebias_marmoratus
ENSLBEG00000016945	-	100	85.354	ENSKMAG00000019693	sar1b	100	85.354	Kryptolebias_marmoratus
ENSLBEG00000016945	-	100	82.323	ENSLACG00000010795	sar1b	100	82.323	Latimeria_chalumnae
ENSLBEG00000016945	-	100	67.839	ENSLACG00000017029	-	100	67.839	Latimeria_chalumnae
ENSLBEG00000016945	-	100	86.869	ENSLOCG00000010197	sar1b	100	86.869	Lepisosteus_oculatus
ENSLBEG00000016945	-	100	89.394	ENSLOCG00000005214	-	100	89.394	Lepisosteus_oculatus
ENSLBEG00000016945	-	100	83.838	ENSMAMG00000021732	sar1b	100	83.838	Mastacembelus_armatus
ENSLBEG00000016945	-	100	85.859	ENSMZEG00005008942	sar1b	100	85.859	Maylandia_zebra
ENSLBEG00000016945	-	100	97.475	ENSMZEG00005001012	-	100	97.475	Maylandia_zebra
ENSLBEG00000016945	-	90	86.592	ENSMGAG00000005387	-	91	86.592	Meleagris_gallopavo
ENSLBEG00000016945	-	100	97.475	ENSMMOG00000013803	-	100	97.475	Mola_mola
ENSLBEG00000016945	-	100	84.343	ENSMALG00000016635	sar1b	97	82.967	Monopterus_albus
ENSLBEG00000016945	-	100	85.859	ENSNBRG00000008013	sar1b	100	85.859	Neolamprologus_brichardi
ENSLBEG00000016945	-	100	97.980	ENSNBRG00000014004	-	100	97.980	Neolamprologus_brichardi
ENSLBEG00000016945	-	100	85.859	ENSONIG00000017278	sar1b	100	85.859	Oreochromis_niloticus
ENSLBEG00000016945	-	100	86.364	ENSORLG00000000932	sar1b	100	86.364	Oryzias_latipes
ENSLBEG00000016945	-	100	86.364	ENSORLG00020021985	sar1b	100	86.364	Oryzias_latipes_hni
ENSLBEG00000016945	-	100	86.364	ENSORLG00015007044	sar1b	100	86.364	Oryzias_latipes_hsok
ENSLBEG00000016945	-	100	84.848	ENSOMEG00000001052	sar1b	100	84.848	Oryzias_melastigma
ENSLBEG00000016945	-	100	87.374	ENSPKIG00000017353	-	100	87.374	Paramormyrops_kingsleyae
ENSLBEG00000016945	-	100	84.848	ENSPKIG00000010688	sar1b	100	84.848	Paramormyrops_kingsleyae
ENSLBEG00000016945	-	59	90.517	ENSPMGG00000001234	sar1b	91	90.517	Periophthalmus_magnuspinnatus
ENSLBEG00000016945	-	100	81.592	ENSPMAG00000003593	sar1b	100	81.592	Petromyzon_marinus
ENSLBEG00000016945	-	100	84.848	ENSPFOG00000005666	sar1b	100	84.848	Poecilia_formosa
ENSLBEG00000016945	-	59	91.453	ENSPLAG00000001016	-	75	91.453	Poecilia_latipinna
ENSLBEG00000016945	-	100	85.354	ENSPLAG00000012223	sar1b	100	85.354	Poecilia_latipinna
ENSLBEG00000016945	-	100	84.848	ENSPMEG00000016831	sar1b	100	84.848	Poecilia_mexicana
ENSLBEG00000016945	-	100	84.848	ENSPREG00000005312	sar1b	90	84.848	Poecilia_reticulata
ENSLBEG00000016945	-	60	90.678	ENSPREG00000002020	-	87	90.678	Poecilia_reticulata
ENSLBEG00000016945	-	100	97.980	ENSPNYG00000021357	-	100	97.980	Pundamilia_nyererei
ENSLBEG00000016945	-	100	85.859	ENSPNYG00000012440	sar1b	100	85.859	Pundamilia_nyererei
ENSLBEG00000016945	-	100	90.404	ENSPNAG00000001123	-	100	90.404	Pygocentrus_nattereri
ENSLBEG00000016945	-	100	87.374	ENSPNAG00000014683	sar1b	100	87.374	Pygocentrus_nattereri
ENSLBEG00000016945	-	100	87.879	ENSSFOG00015020051	sar1b	100	87.879	Scleropages_formosus
ENSLBEG00000016945	-	100	87.374	ENSSFOG00015018128	-	100	87.374	Scleropages_formosus
ENSLBEG00000016945	-	100	82.323	ENSSMAG00000007106	sar1b	80	82.323	Scophthalmus_maximus
ENSLBEG00000016945	-	100	94.949	ENSSMAG00000002165	-	100	94.949	Scophthalmus_maximus
ENSLBEG00000016945	-	100	97.475	ENSSDUG00000019629	-	100	97.475	Seriola_dumerili
ENSLBEG00000016945	-	100	85.859	ENSSDUG00000020926	sar1b	94	92.241	Seriola_dumerili
ENSLBEG00000016945	-	100	85.859	ENSSLDG00000017052	sar1b	94	93.519	Seriola_lalandi_dorsalis
ENSLBEG00000016945	-	100	97.475	ENSSLDG00000024197	-	100	97.475	Seriola_lalandi_dorsalis
ENSLBEG00000016945	-	100	84.848	ENSSPUG00000010247	-	100	84.848	Sphenodon_punctatus
ENSLBEG00000016945	-	100	85.859	ENSSPAG00000017634	sar1b	100	85.859	Stegastes_partitus
ENSLBEG00000016945	-	100	97.475	ENSSPAG00000015626	-	100	97.475	Stegastes_partitus
ENSLBEG00000016945	-	100	82.323	ENSTRUG00000023908	sar1b	100	82.323	Takifugu_rubripes
ENSLBEG00000016945	-	100	83.333	ENSTNIG00000016097	sar1b	100	83.333	Tetraodon_nigroviridis
ENSLBEG00000016945	-	59	89.744	ENSXCOG00000006154	-	79	89.744	Xiphophorus_couchianus
ENSLBEG00000016945	-	90	84.270	ENSXCOG00000004160	sar1b	87	84.270	Xiphophorus_couchianus
ENSLBEG00000016945	-	100	84.848	ENSXMAG00000008294	sar1b	100	84.848	Xiphophorus_maculatus