EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000016973 (Gene tree)
Gene ID: 109998777
Gene Symbol: si:ch211-244b2.4
Alias: fa94g12|wu:fa94g12|zgc:113454
Full Name: uncharacterized LOC109998777
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6489 bases
Position: chrFKLU01000510.1:214491-220979
Accession: 109998777
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022099	zf-CCCH	PF00642.24	1.3e-07	1	1
ENSLBEP00000022081	zf-CCCH	PF00642.24	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023270	-	2062	XM_020653649	ENSLBEP00000022099	356 (aa)	XP_020509305	UPI0009B36B35
ENSLBET00000023249	-	2293	XM_020653647	ENSLBEP00000022081	433 (aa)	XP_020509303	UPI0009B47711

Gene Model

Click here to download ENSLBEG00000016973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000016973's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000016973	si:ch211-244b2.4	98	62.254	ENSAPEG00000007620	si:ch211-244b2.4	97	66.403	Amphiprion_percula
ENSLBEG00000016973	si:ch211-244b2.4	88	64.375	ENSACLG00000022403	si:ch211-244b2.4	94	64.898	Astatotilapia_calliptera
ENSLBEG00000016973	si:ch211-244b2.4	100	57.735	ENSFHEG00000004642	si:ch211-244b2.4	100	59.231	Fundulus_heteroclitus
ENSLBEG00000016973	si:ch211-244b2.4	95	62.139	ENSHBUG00000019440	si:ch211-244b2.4	95	65.714	Haplochromis_burtoni
ENSLBEG00000016973	si:ch211-244b2.4	63	64.758	ENSKMAG00000009331	si:ch211-244b2.4	81	64.758	Kryptolebias_marmoratus
ENSLBEG00000016973	si:ch211-244b2.4	87	44.000	ENSLACG00000012806	-	98	49.474	Latimeria_chalumnae
ENSLBEG00000016973	si:ch211-244b2.4	88	64.062	ENSMZEG00005005397	si:ch211-244b2.4	94	65.060	Maylandia_zebra
ENSLBEG00000016973	si:ch211-244b2.4	82	55.219	ENSNBRG00000007103	si:ch211-244b2.4	92	54.381	Neolamprologus_brichardi
ENSLBEG00000016973	si:ch211-244b2.4	100	57.300	ENSORLG00000015345	si:ch211-244b2.4	100	57.418	Oryzias_latipes
ENSLBEG00000016973	si:ch211-244b2.4	96	59.012	ENSORLG00020013462	si:ch211-244b2.4	99	61.217	Oryzias_latipes_hni
ENSLBEG00000016973	si:ch211-244b2.4	100	57.576	ENSORLG00015011985	si:ch211-244b2.4	100	57.576	Oryzias_latipes_hsok
ENSLBEG00000016973	si:ch211-244b2.4	99	55.278	ENSOMEG00000006058	si:ch211-244b2.4	96	61.303	Oryzias_melastigma
ENSLBEG00000016973	si:ch211-244b2.4	90	60.308	ENSPFOG00000008262	si:ch211-244b2.4	100	61.364	Poecilia_formosa
ENSLBEG00000016973	si:ch211-244b2.4	90	60.308	ENSPLAG00000010029	si:ch211-244b2.4	100	61.509	Poecilia_latipinna
ENSLBEG00000016973	si:ch211-244b2.4	90	60.308	ENSPMEG00000020729	si:ch211-244b2.4	100	61.832	Poecilia_mexicana
ENSLBEG00000016973	si:ch211-244b2.4	89	55.205	ENSPREG00000001561	si:ch211-244b2.4	96	60.714	Poecilia_reticulata
ENSLBEG00000016973	si:ch211-244b2.4	88	64.375	ENSPNYG00000001424	si:ch211-244b2.4	93	64.898	Pundamilia_nyererei
ENSLBEG00000016973	si:ch211-244b2.4	90	65.231	ENSSMAG00000002425	si:ch211-244b2.4	99	63.985	Scophthalmus_maximus