EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000017065 (Gene tree)
Gene ID: 110002525
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 41209 bases
Position: chrFKLU01000976.1:47098-88306
Accession: 110002525
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022242	CPSF_A	PF03178.15	3.7e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023419	-	2916	XM_020658147	ENSLBEP00000022242	971 (aa)	XP_020513803	-

Gene Model

Click here to download ENSLBEG00000017065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017065's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017065	ddb1	99	91.399	ENSG00000167986	DDB1	99	94.512	Homo_sapiens
ENSLBEG00000017065	ddb1	99	99.168	ENSAPOG00000005036	ddb1	98	99.168	Acanthochromis_polyacanthus
ENSLBEG00000017065	ddb1	99	91.503	ENSAMEG00000016518	DDB1	85	91.503	Ailuropoda_melanoleuca
ENSLBEG00000017065	ddb1	99	98.857	ENSACIG00000020624	ddb1	98	98.857	Amphilophus_citrinellus
ENSLBEG00000017065	ddb1	99	99.063	ENSAOCG00000003066	ddb1	84	99.063	Amphiprion_ocellaris
ENSLBEG00000017065	ddb1	99	99.063	ENSAPEG00000000092	ddb1	88	99.063	Amphiprion_percula
ENSLBEG00000017065	ddb1	99	99.688	ENSATEG00000020571	ddb1	98	93.880	Anabas_testudineus
ENSLBEG00000017065	ddb1	99	90.739	ENSAPLG00000007174	DDB1	84	90.739	Anas_platyrhynchos
ENSLBEG00000017065	ddb1	99	90.693	ENSACAG00000017758	DDB1	85	90.693	Anolis_carolinensis
ENSLBEG00000017065	ddb1	99	91.399	ENSANAG00000021878	DDB1	85	91.399	Aotus_nancymaae
ENSLBEG00000017065	ddb1	99	98.751	ENSACLG00000012401	ddb1	98	98.171	Astatotilapia_calliptera
ENSLBEG00000017065	ddb1	99	91.399	ENSBTAG00000021569	DDB1	79	91.399	Bos_taurus
ENSLBEG00000017065	ddb1	99	38.032	WBGene00010890	ddb-1	84	38.032	Caenorhabditis_elegans
ENSLBEG00000017065	ddb1	99	91.399	ENSCJAG00000019319	DDB1	85	91.399	Callithrix_jacchus
ENSLBEG00000017065	ddb1	99	91.503	ENSCAFG00000016264	DDB1	89	91.503	Canis_familiaris
ENSLBEG00000017065	ddb1	99	91.503	ENSCAFG00020012722	DDB1	89	91.503	Canis_lupus_dingo
ENSLBEG00000017065	ddb1	99	91.399	ENSCHIG00000014969	DDB1	85	91.399	Capra_hircus
ENSLBEG00000017065	ddb1	99	91.088	ENSTSYG00000008027	DDB1	85	91.088	Carlito_syrichta
ENSLBEG00000017065	ddb1	99	91.658	ENSCAPG00000010786	DDB1	86	91.658	Cavia_aperea
ENSLBEG00000017065	ddb1	99	91.399	ENSCPOG00000009956	DDB1	85	91.399	Cavia_porcellus
ENSLBEG00000017065	ddb1	99	91.399	ENSCCAG00000035883	DDB1	85	91.399	Cebus_capucinus
ENSLBEG00000017065	ddb1	99	89.048	ENSCATG00000044495	DDB1	85	89.048	Cercocebus_atys
ENSLBEG00000017065	ddb1	99	91.503	ENSCLAG00000004126	DDB1	85	91.503	Chinchilla_lanigera
ENSLBEG00000017065	ddb1	99	91.399	ENSCSAG00000006392	DDB1	85	91.399	Chlorocebus_sabaeus
ENSLBEG00000017065	ddb1	84	91.365	ENSCHOG00000011377	DDB1	73	91.365	Choloepus_hoffmanni
ENSLBEG00000017065	ddb1	99	90.881	ENSCPBG00000017728	DDB1	85	90.881	Chrysemys_picta_bellii
ENSLBEG00000017065	ddb1	99	61.665	ENSCING00000007437	-	84	61.665	Ciona_intestinalis
ENSLBEG00000017065	ddb1	94	61.297	ENSCSAVG00000004783	-	100	60.285	Ciona_savignyi
ENSLBEG00000017065	ddb1	99	91.399	ENSCANG00000019948	DDB1	85	91.399	Colobus_angolensis_palliatus
ENSLBEG00000017065	ddb1	99	91.503	ENSCGRG00001016599	Ddb1	89	90.379	Cricetulus_griseus_chok1gshd
ENSLBEG00000017065	ddb1	99	91.503	ENSCGRG00000013427	Ddb1	85	91.503	Cricetulus_griseus_crigri
ENSLBEG00000017065	ddb1	99	98.335	ENSCSEG00000012499	ddb1	98	96.701	Cynoglossus_semilaevis
ENSLBEG00000017065	ddb1	99	97.815	ENSCVAG00000019531	ddb1	89	97.815	Cyprinodon_variegatus
ENSLBEG00000017065	ddb1	99	91.684	ENSDARG00000074431	ddb1	84	91.684	Danio_rerio
ENSLBEG00000017065	ddb1	99	91.503	ENSDNOG00000014884	DDB1	87	91.503	Dasypus_novemcinctus
ENSLBEG00000017065	ddb1	80	94.146	ENSDORG00000000127	Ddb1	82	94.146	Dipodomys_ordii
ENSLBEG00000017065	ddb1	99	60.455	FBgn0260962	pic	84	60.455	Drosophila_melanogaster
ENSLBEG00000017065	ddb1	65	94.142	ENSETEG00000001053	-	56	94.142	Echinops_telfairi
ENSLBEG00000017065	ddb1	90	84.138	ENSEBUG00000014593	ddb1	95	84.138	Eptatretus_burgeri
ENSLBEG00000017065	ddb1	99	91.503	ENSEASG00005008184	DDB1	85	91.503	Equus_asinus_asinus
ENSLBEG00000017065	ddb1	99	91.503	ENSECAG00000012136	DDB1	85	91.503	Equus_caballus
ENSLBEG00000017065	ddb1	84	87.255	ENSEEUG00000003194	DDB1	71	87.255	Erinaceus_europaeus
ENSLBEG00000017065	ddb1	99	97.294	ENSELUG00000023868	ddb1	84	97.294	Esox_lucius
ENSLBEG00000017065	ddb1	99	91.503	ENSFCAG00000029716	DDB1	85	91.503	Felis_catus
ENSLBEG00000017065	ddb1	99	91.241	ENSFALG00000011981	DDB1	85	90.975	Ficedula_albicollis
ENSLBEG00000017065	ddb1	99	91.295	ENSFDAG00000005128	DDB1	85	91.295	Fukomys_damarensis
ENSLBEG00000017065	ddb1	88	98.947	ENSFHEG00000022133	ddb1	83	98.947	Fundulus_heteroclitus
ENSLBEG00000017065	ddb1	80	97.993	ENSGMOG00000019386	ddb1	80	97.993	Gadus_morhua
ENSLBEG00000017065	ddb1	99	90.881	ENSGALG00000042333	DDB1	85	90.881	Gallus_gallus
ENSLBEG00000017065	ddb1	99	98.439	ENSGAFG00000013142	ddb1	89	98.439	Gambusia_affinis
ENSLBEG00000017065	ddb1	99	99.063	ENSGACG00000017182	ddb1	88	99.063	Gasterosteus_aculeatus
ENSLBEG00000017065	ddb1	95	90.909	ENSGAGG00000014124	DDB1	85	90.909	Gopherus_agassizii
ENSLBEG00000017065	ddb1	99	91.399	ENSGGOG00000004052	DDB1	85	91.399	Gorilla_gorilla
ENSLBEG00000017065	ddb1	99	98.751	ENSHBUG00000008873	ddb1	85	98.701	Haplochromis_burtoni
ENSLBEG00000017065	ddb1	99	91.295	ENSHGLG00000018430	DDB1	85	91.295	Heterocephalus_glaber_female
ENSLBEG00000017065	ddb1	99	90.155	ENSHGLG00100014475	DDB1	85	90.155	Heterocephalus_glaber_male
ENSLBEG00000017065	ddb1	99	98.647	ENSHCOG00000018670	ddb1	88	98.647	Hippocampus_comes
ENSLBEG00000017065	ddb1	99	95.942	ENSIPUG00000005612	DDB1	87	95.942	Ictalurus_punctatus
ENSLBEG00000017065	ddb1	99	91.399	ENSSTOG00000007552	DDB1	85	91.399	Ictidomys_tridecemlineatus
ENSLBEG00000017065	ddb1	99	91.399	ENSJJAG00000017769	Ddb1	85	91.399	Jaculus_jaculus
ENSLBEG00000017065	ddb1	99	98.647	ENSKMAG00000002315	ddb1	89	98.647	Kryptolebias_marmoratus
ENSLBEG00000017065	ddb1	99	90.881	ENSLACG00000017611	DDB1	88	90.862	Latimeria_chalumnae
ENSLBEG00000017065	ddb1	89	86.877	ENSLOCG00000000012	ddb1	83	86.877	Lepisosteus_oculatus
ENSLBEG00000017065	ddb1	99	91.295	ENSLAFG00000011513	DDB1	85	91.295	Loxodonta_africana
ENSLBEG00000017065	ddb1	99	91.399	ENSMFAG00000042035	DDB1	85	91.399	Macaca_fascicularis
ENSLBEG00000017065	ddb1	99	91.399	ENSMMUG00000002691	DDB1	91	86.885	Macaca_mulatta
ENSLBEG00000017065	ddb1	99	91.399	ENSMNEG00000031559	DDB1	85	91.399	Macaca_nemestrina
ENSLBEG00000017065	ddb1	99	91.399	ENSMLEG00000044136	DDB1	88	89.662	Mandrillus_leucophaeus
ENSLBEG00000017065	ddb1	99	99.584	ENSMAMG00000014372	ddb1	84	99.584	Mastacembelus_armatus
ENSLBEG00000017065	ddb1	99	98.751	ENSMZEG00005013835	ddb1	84	98.751	Maylandia_zebra
ENSLBEG00000017065	ddb1	94	90.560	ENSMGAG00000004990	DDB1	85	90.560	Meleagris_gallopavo
ENSLBEG00000017065	ddb1	99	91.503	ENSMAUG00000012926	Ddb1	85	91.503	Mesocricetus_auratus
ENSLBEG00000017065	ddb1	99	91.606	ENSMICG00000013703	DDB1	85	91.606	Microcebus_murinus
ENSLBEG00000017065	ddb1	99	91.399	ENSMOCG00000020499	Ddb1	85	91.399	Microtus_ochrogaster
ENSLBEG00000017065	ddb1	99	99.480	ENSMMOG00000001758	ddb1	98	99.480	Mola_mola
ENSLBEG00000017065	ddb1	99	82.128	ENSMODG00000020353	DDB1	84	82.128	Monodelphis_domestica
ENSLBEG00000017065	ddb1	99	99.272	ENSMALG00000014071	ddb1	84	99.272	Monopterus_albus
ENSLBEG00000017065	ddb1	99	91.503	MGP_CAROLIEiJ_G0022695	Ddb1	85	91.503	Mus_caroli
ENSLBEG00000017065	ddb1	99	91.606	ENSMUSG00000024740	Ddb1	85	91.606	Mus_musculus
ENSLBEG00000017065	ddb1	99	91.503	MGP_PahariEiJ_G0014189	Ddb1	85	91.503	Mus_pahari
ENSLBEG00000017065	ddb1	99	91.606	MGP_SPRETEiJ_G0023609	Ddb1	85	91.606	Mus_spretus
ENSLBEG00000017065	ddb1	99	90.674	ENSMPUG00000014200	DDB1	87	90.674	Mustela_putorius_furo
ENSLBEG00000017065	ddb1	99	91.399	ENSMLUG00000013232	DDB1	85	91.399	Myotis_lucifugus
ENSLBEG00000017065	ddb1	99	91.399	ENSNGAG00000009384	Ddb1	85	91.399	Nannospalax_galili
ENSLBEG00000017065	ddb1	99	98.855	ENSNBRG00000019581	ddb1	84	98.855	Neolamprologus_brichardi
ENSLBEG00000017065	ddb1	99	88.536	ENSNLEG00000002022	DDB1	85	88.536	Nomascus_leucogenys
ENSLBEG00000017065	ddb1	89	100.000	ENSMEUG00000001099	DDB1	78	100.000	Notamacropus_eugenii
ENSLBEG00000017065	ddb1	90	87.945	ENSOPRG00000008254	DDB1	76	87.945	Ochotona_princeps
ENSLBEG00000017065	ddb1	99	91.606	ENSODEG00000002419	DDB1	85	91.606	Octodon_degus
ENSLBEG00000017065	ddb1	99	98.855	ENSONIG00000005804	ddb1	84	98.855	Oreochromis_niloticus
ENSLBEG00000017065	ddb1	90	91.055	ENSOANG00000004897	DDB1	84	91.055	Ornithorhynchus_anatinus
ENSLBEG00000017065	ddb1	99	91.503	ENSOCUG00000001667	DDB1	85	91.503	Oryctolagus_cuniculus
ENSLBEG00000017065	ddb1	99	97.711	ENSORLG00000001399	ddb1	90	97.711	Oryzias_latipes
ENSLBEG00000017065	ddb1	99	97.607	ENSORLG00020001277	ddb1	85	97.607	Oryzias_latipes_hni
ENSLBEG00000017065	ddb1	99	97.711	ENSORLG00015002080	ddb1	88	97.711	Oryzias_latipes_hsok
ENSLBEG00000017065	ddb1	99	98.023	ENSOMEG00000006181	ddb1	97	91.886	Oryzias_melastigma
ENSLBEG00000017065	ddb1	99	91.606	ENSOGAG00000016103	DDB1	85	91.606	Otolemur_garnettii
ENSLBEG00000017065	ddb1	99	91.399	ENSOARG00000011716	DDB1	84	91.399	Ovis_aries
ENSLBEG00000017065	ddb1	99	91.399	ENSPPAG00000035343	DDB1	85	91.399	Pan_paniscus
ENSLBEG00000017065	ddb1	99	91.503	ENSPPRG00000013300	DDB1	85	91.503	Panthera_pardus
ENSLBEG00000017065	ddb1	99	91.762	ENSPTIG00000006909	DDB1	84	91.762	Panthera_tigris_altaica
ENSLBEG00000017065	ddb1	99	91.399	ENSPTRG00000003737	DDB1	85	91.399	Pan_troglodytes
ENSLBEG00000017065	ddb1	99	91.399	ENSPANG00000000242	DDB1	85	91.399	Papio_anubis
ENSLBEG00000017065	ddb1	99	96.254	ENSPKIG00000019213	ddb1	84	96.254	Paramormyrops_kingsleyae
ENSLBEG00000017065	ddb1	99	90.644	ENSPSIG00000013275	DDB1	86	90.644	Pelodiscus_sinensis
ENSLBEG00000017065	ddb1	99	99.168	ENSPMGG00000021179	ddb1	98	99.168	Periophthalmus_magnuspinnatus
ENSLBEG00000017065	ddb1	99	91.503	ENSPEMG00000012241	Ddb1	85	91.503	Peromyscus_maniculatus_bairdii
ENSLBEG00000017065	ddb1	99	86.250	ENSPMAG00000008479	ddb1	94	86.250	Petromyzon_marinus
ENSLBEG00000017065	ddb1	99	91.813	ENSPCIG00000002643	DDB1	85	91.813	Phascolarctos_cinereus
ENSLBEG00000017065	ddb1	99	98.647	ENSPFOG00000002768	ddb1	84	98.647	Poecilia_formosa
ENSLBEG00000017065	ddb1	99	98.647	ENSPLAG00000017227	ddb1	88	98.647	Poecilia_latipinna
ENSLBEG00000017065	ddb1	99	98.647	ENSPMEG00000011398	ddb1	88	98.647	Poecilia_mexicana
ENSLBEG00000017065	ddb1	99	98.647	ENSPREG00000004440	ddb1	87	98.647	Poecilia_reticulata
ENSLBEG00000017065	ddb1	99	87.073	ENSPPYG00000003193	DDB1	84	87.073	Pongo_abelii
ENSLBEG00000017065	ddb1	81	89.764	ENSPCAG00000011040	DDB1	69	89.764	Procavia_capensis
ENSLBEG00000017065	ddb1	99	90.900	ENSPCOG00000015176	DDB1	85	90.900	Propithecus_coquereli
ENSLBEG00000017065	ddb1	99	91.295	ENSPVAG00000003847	DDB1	85	91.295	Pteropus_vampyrus
ENSLBEG00000017065	ddb1	99	96.566	ENSPNAG00000006635	ddb1	87	96.566	Pygocentrus_nattereri
ENSLBEG00000017065	ddb1	99	91.606	ENSRNOG00000020715	Ddb1	85	91.606	Rattus_norvegicus
ENSLBEG00000017065	ddb1	99	91.399	ENSRBIG00000033611	DDB1	85	91.399	Rhinopithecus_bieti
ENSLBEG00000017065	ddb1	99	91.399	ENSRROG00000041407	DDB1	85	91.399	Rhinopithecus_roxellana
ENSLBEG00000017065	ddb1	99	91.503	ENSSBOG00000019775	DDB1	85	91.503	Saimiri_boliviensis_boliviensis
ENSLBEG00000017065	ddb1	94	89.011	ENSSHAG00000011600	DDB1	85	89.011	Sarcophilus_harrisii
ENSLBEG00000017065	ddb1	99	96.462	ENSSFOG00015011151	ddb1	86	96.462	Scleropages_formosus
ENSLBEG00000017065	ddb1	99	99.168	ENSSMAG00000009495	ddb1	84	99.168	Scophthalmus_maximus
ENSLBEG00000017065	ddb1	99	99.376	ENSSDUG00000004642	ddb1	84	99.376	Seriola_dumerili
ENSLBEG00000017065	ddb1	99	99.376	ENSSLDG00000015804	ddb1	84	99.376	Seriola_lalandi_dorsalis
ENSLBEG00000017065	ddb1	63	94.340	ENSSARG00000003290	-	56	94.340	Sorex_araneus
ENSLBEG00000017065	ddb1	99	90.777	ENSSPUG00000019338	DDB1	85	90.777	Sphenodon_punctatus
ENSLBEG00000017065	ddb1	99	99.376	ENSSPAG00000009888	ddb1	98	96.158	Stegastes_partitus
ENSLBEG00000017065	ddb1	99	90.881	ENSSSCG00000013094	DDB1	85	90.881	Sus_scrofa
ENSLBEG00000017065	ddb1	99	91.088	ENSTGUG00000006414	DDB1	85	91.088	Taeniopygia_guttata
ENSLBEG00000017065	ddb1	99	98.127	ENSTRUG00000016682	ddb1	98	95.223	Takifugu_rubripes
ENSLBEG00000017065	ddb1	87	91.795	ENSTNIG00000009565	ddb1	84	91.795	Tetraodon_nigroviridis
ENSLBEG00000017065	ddb1	92	84.818	ENSTTRG00000011055	DDB1	80	84.818	Tursiops_truncatus
ENSLBEG00000017065	ddb1	99	91.503	ENSUAMG00000017793	DDB1	84	91.503	Ursus_americanus
ENSLBEG00000017065	ddb1	99	91.503	ENSUMAG00000011788	DDB1	88	91.503	Ursus_maritimus
ENSLBEG00000017065	ddb1	95	86.782	ENSVPAG00000007963	DDB1	82	86.782	Vicugna_pacos
ENSLBEG00000017065	ddb1	99	91.503	ENSVVUG00000004987	DDB1	85	91.503	Vulpes_vulpes
ENSLBEG00000017065	ddb1	99	88.785	ENSXETG00000008820	ddb1	84	88.785	Xenopus_tropicalis
ENSLBEG00000017065	ddb1	99	98.441	ENSXCOG00000013956	ddb1	98	98.441	Xiphophorus_couchianus
ENSLBEG00000017065	ddb1	99	98.439	ENSXMAG00000000022	ddb1	89	98.439	Xiphophorus_maculatus