EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000017089 (Gene tree)
Gene ID: 109993725
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 11576 bases
Position: chrFKLU01000265.1:661481-673056
Accession: 109993725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022251	Fox-1_C	PF12414.8	1.3e-34	1	1
ENSLBEP00000022251	RRM_1	PF00076.22	9.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023429	-	1152	XM_020646783	ENSLBEP00000022251	383 (aa)	XP_020502439	UPI0009B31D8A

Gene Model

Click here to download ENSLBEG00000017089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017089's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000017089	rbfox1l	89	59.475	ENSLBEG00000004030	rbfox3b	94	55.627
ENSLBEG00000017089	rbfox1l	84	57.276	ENSLBEG00000022508	-	61	72.414
ENSLBEG00000017089	rbfox1l	77	59.122	ENSLBEG00000014659	rbfox1	82	58.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017089	rbfox1l	97	91.105	ENSAPOG00000016304	rbfox1l	98	90.566	Acanthochromis_polyacanthus
ENSLBEG00000017089	rbfox1l	100	84.595	ENSACIG00000006441	rbfox1l	100	84.595	Amphilophus_citrinellus
ENSLBEG00000017089	rbfox1l	83	86.792	ENSAOCG00000020938	rbfox1l	99	86.053	Amphiprion_ocellaris
ENSLBEG00000017089	rbfox1l	100	91.645	ENSAPEG00000008232	rbfox1l	100	91.123	Amphiprion_percula
ENSLBEG00000017089	rbfox1l	100	89.556	ENSATEG00000022649	rbfox1l	100	89.556	Anabas_testudineus
ENSLBEG00000017089	rbfox1l	64	73.518	ENSACAG00000011931	-	91	73.123	Anolis_carolinensis
ENSLBEG00000017089	rbfox1l	100	90.339	ENSACLG00000021394	rbfox1l	100	90.339	Astatotilapia_calliptera
ENSLBEG00000017089	rbfox1l	100	87.565	ENSAMXG00000010470	rbfox1l	100	84.974	Astyanax_mexicanus
ENSLBEG00000017089	rbfox1l	100	54.613	ENSCPBG00000010944	-	100	57.653	Chrysemys_picta_bellii
ENSLBEG00000017089	rbfox1l	100	89.844	ENSCSEG00000018898	rbfox1l	100	90.104	Cynoglossus_semilaevis
ENSLBEG00000017089	rbfox1l	100	90.601	ENSCVAG00000007986	rbfox1l	100	90.339	Cyprinodon_variegatus
ENSLBEG00000017089	rbfox1l	100	86.010	ENSDARG00000021184	rbfox1l	100	83.938	Danio_rerio
ENSLBEG00000017089	rbfox1l	100	83.206	ENSELUG00000015077	rbfox1l	100	83.206	Esox_lucius
ENSLBEG00000017089	rbfox1l	95	95.122	ENSFHEG00000016557	rbfox1l	95	95.122	Fundulus_heteroclitus
ENSLBEG00000017089	rbfox1l	100	84.856	ENSGMOG00000005040	rbfox1l	100	84.856	Gadus_morhua
ENSLBEG00000017089	rbfox1l	92	88.701	ENSGAFG00000013211	rbfox1l	97	88.701	Gambusia_affinis
ENSLBEG00000017089	rbfox1l	100	91.123	ENSGACG00000010757	rbfox1l	100	91.123	Gasterosteus_aculeatus
ENSLBEG00000017089	rbfox1l	64	70.683	ENSGAGG00000012440	-	86	70.800	Gopherus_agassizii
ENSLBEG00000017089	rbfox1l	100	90.339	ENSHBUG00000013406	rbfox1l	100	90.339	Haplochromis_burtoni
ENSLBEG00000017089	rbfox1l	100	88.542	ENSHCOG00000020771	rbfox1l	100	88.802	Hippocampus_comes
ENSLBEG00000017089	rbfox1l	99	80.105	ENSIPUG00000000065	rbfox1l	99	80.168	Ictalurus_punctatus
ENSLBEG00000017089	rbfox1l	100	89.091	ENSKMAG00000005146	rbfox1l	100	88.571	Kryptolebias_marmoratus
ENSLBEG00000017089	rbfox1l	100	91.906	ENSMAMG00000019480	rbfox1l	100	91.906	Mastacembelus_armatus
ENSLBEG00000017089	rbfox1l	100	90.339	ENSMZEG00005016374	rbfox1l	100	90.339	Maylandia_zebra
ENSLBEG00000017089	rbfox1l	100	91.384	ENSMMOG00000016530	rbfox1l	100	91.384	Mola_mola
ENSLBEG00000017089	rbfox1l	100	88.251	ENSMALG00000009384	rbfox1l	100	88.251	Monopterus_albus
ENSLBEG00000017089	rbfox1l	100	89.556	ENSNBRG00000003346	rbfox1l	100	89.556	Neolamprologus_brichardi
ENSLBEG00000017089	rbfox1l	100	90.862	ENSONIG00000012754	rbfox1l	100	90.862	Oreochromis_niloticus
ENSLBEG00000017089	rbfox1l	100	89.295	ENSORLG00000011269	rbfox1l	100	88.773	Oryzias_latipes
ENSLBEG00000017089	rbfox1l	100	90.078	ENSORLG00020000162	rbfox1l	100	89.556	Oryzias_latipes_hni
ENSLBEG00000017089	rbfox1l	100	90.078	ENSORLG00015013464	rbfox1l	100	89.556	Oryzias_latipes_hsok
ENSLBEG00000017089	rbfox1l	100	90.862	ENSOMEG00000010584	rbfox1l	100	90.339	Oryzias_melastigma
ENSLBEG00000017089	rbfox1l	100	88.281	ENSPKIG00000012029	rbfox1l	100	86.458	Paramormyrops_kingsleyae
ENSLBEG00000017089	rbfox1l	100	83.333	ENSPMGG00000012082	rbfox1l	100	80.990	Periophthalmus_magnuspinnatus
ENSLBEG00000017089	rbfox1l	100	90.862	ENSPFOG00000009338	rbfox1l	100	90.862	Poecilia_formosa
ENSLBEG00000017089	rbfox1l	85	81.040	ENSPLAG00000012816	rbfox1l	99	81.040	Poecilia_latipinna
ENSLBEG00000017089	rbfox1l	100	86.423	ENSPMEG00000017597	rbfox1l	100	85.901	Poecilia_mexicana
ENSLBEG00000017089	rbfox1l	100	86.162	ENSPREG00000007940	rbfox1l	100	85.640	Poecilia_reticulata
ENSLBEG00000017089	rbfox1l	100	90.078	ENSPNYG00000002098	rbfox1l	100	90.078	Pundamilia_nyererei
ENSLBEG00000017089	rbfox1l	100	86.563	ENSPNAG00000001620	rbfox1l	100	83.721	Pygocentrus_nattereri
ENSLBEG00000017089	rbfox1l	100	84.156	ENSSFOG00015000675	rbfox1l	100	82.597	Scleropages_formosus
ENSLBEG00000017089	rbfox1l	100	92.950	ENSSMAG00000013090	rbfox1l	100	92.950	Scophthalmus_maximus
ENSLBEG00000017089	rbfox1l	100	90.231	ENSSDUG00000008705	rbfox1l	100	89.974	Seriola_dumerili
ENSLBEG00000017089	rbfox1l	100	90.722	ENSSLDG00000022256	rbfox1l	100	90.464	Seriola_lalandi_dorsalis
ENSLBEG00000017089	rbfox1l	100	91.906	ENSSPAG00000016620	rbfox1l	100	91.384	Stegastes_partitus
ENSLBEG00000017089	rbfox1l	96	86.757	ENSTRUG00000015905	rbfox1l	100	85.405	Takifugu_rubripes
ENSLBEG00000017089	rbfox1l	65	82.528	ENSTNIG00000008088	rbfox1l	99	83.955	Tetraodon_nigroviridis
ENSLBEG00000017089	rbfox1l	100	90.078	ENSXMAG00000023471	rbfox1l	100	90.078	Xiphophorus_maculatus