EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000017147 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized protein CXorf23-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 13826 bases
Position: chrFKLU01002547.1:9316-23141
Accession: 110005933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022321	THRAP3_BCLAF1	PF15440.6	9.4e-25	1	1
ENSLBEP00000022338	THRAP3_BCLAF1	PF15440.6	1.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023517	-	2150	-	ENSLBEP00000022338	257 (aa)	-	-
ENSLBET00000023500	-	3630	XM_020661197	ENSLBEP00000022321	523 (aa)	XP_020516853	-

Gene Model

Click here to download ENSLBEG00000017147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017147's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000017147	-	98	100.000	ENSLBEG00000013509	-	72	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017147	-	54	40.000	ENSG00000173681	BCLAF3	69	38.037	Homo_sapiens
ENSLBEG00000017147	-	86	70.614	ENSAPOG00000005256	-	69	60.153	Acanthochromis_polyacanthus
ENSLBEG00000017147	-	89	59.389	ENSACIG00000009107	zgc:112982	88	59.389	Amphilophus_citrinellus
ENSLBEG00000017147	-	86	71.930	ENSAOCG00000015540	-	70	60.536	Amphiprion_ocellaris
ENSLBEG00000017147	-	86	71.053	ENSAPEG00000005388	-	70	59.962	Amphiprion_percula
ENSLBEG00000017147	-	96	72.047	ENSATEG00000021059	-	69	62.835	Anabas_testudineus
ENSLBEG00000017147	-	96	63.200	ENSACLG00000015521	-	69	57.500	Astatotilapia_calliptera
ENSLBEG00000017147	-	73	55.102	ENSAMXG00000013954	-	59	50.000	Astyanax_mexicanus
ENSLBEG00000017147	-	52	37.313	ENSCAFG00020004575	-	53	37.313	Canis_lupus_dingo
ENSLBEG00000017147	-	89	58.996	ENSCVAG00000016438	-	67	48.617	Cyprinodon_variegatus
ENSLBEG00000017147	-	85	48.889	ENSDARG00000001829	zgc:112982	61	55.233	Danio_rerio
ENSLBEG00000017147	-	86	58.772	ENSELUG00000012313	-	69	39.629	Esox_lucius
ENSLBEG00000017147	-	96	61.089	ENSFHEG00000006117	-	71	53.992	Fundulus_heteroclitus
ENSLBEG00000017147	-	92	65.702	ENSKMAG00000011858	-	67	53.693	Kryptolebias_marmoratus
ENSLBEG00000017147	-	96	65.600	ENSMZEG00005020613	-	99	65.600	Maylandia_zebra
ENSLBEG00000017147	-	81	52.885	ENSMMOG00000013104	zgc:112982	90	52.885	Mola_mola
ENSLBEG00000017147	-	96	69.960	ENSMALG00000017681	-	97	70.902	Monopterus_albus
ENSLBEG00000017147	-	89	62.719	ENSORLG00000003192	-	64	49.091	Oryzias_latipes
ENSLBEG00000017147	-	89	63.158	ENSORLG00020011477	-	64	49.091	Oryzias_latipes_hni
ENSLBEG00000017147	-	89	62.719	ENSORLG00015008021	-	64	49.697	Oryzias_latipes_hsok
ENSLBEG00000017147	-	89	64.912	ENSOMEG00000006057	-	89	65.438	Oryzias_melastigma
ENSLBEG00000017147	-	96	65.613	ENSPFOG00000002366	-	69	48.669	Poecilia_formosa
ENSLBEG00000017147	-	96	65.613	ENSPLAG00000011747	-	69	48.669	Poecilia_latipinna
ENSLBEG00000017147	-	96	65.217	ENSPMEG00000005281	-	70	47.909	Poecilia_mexicana
ENSLBEG00000017147	-	96	65.217	ENSPREG00000011406	-	86	49.511	Poecilia_reticulata
ENSLBEG00000017147	-	89	63.948	ENSPNYG00000024269	zgc:112982	93	63.786	Pundamilia_nyererei
ENSLBEG00000017147	-	91	50.813	ENSPNAG00000021161	zgc:112982	76	48.235	Pygocentrus_nattereri
ENSLBEG00000017147	-	52	40.146	ENSRBIG00000037769	-	63	38.686	Rhinopithecus_bieti
ENSLBEG00000017147	-	96	68.519	ENSSMAG00000009714	-	99	69.259	Scophthalmus_maximus
ENSLBEG00000017147	-	96	75.099	ENSSDUG00000004371	-	69	66.794	Seriola_dumerili
ENSLBEG00000017147	-	96	75.697	ENSSLDG00000008459	-	69	67.050	Seriola_lalandi_dorsalis
ENSLBEG00000017147	-	86	73.451	ENSSPAG00000017763	-	69	60.577	Stegastes_partitus
ENSLBEG00000017147	-	93	60.744	ENSTRUG00000021930	-	69	47.776	Takifugu_rubripes
ENSLBEG00000017147	-	52	37.037	ENSUAMG00000021444	-	57	37.037	Ursus_americanus
ENSLBEG00000017147	-	96	66.403	ENSXMAG00000010229	-	67	50.000	Xiphophorus_maculatus