EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000017153 (Gene tree)
Gene ID: -
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 9408 bases
Position: chrFKLU01001975.1:7596-17003
Accession: 110005132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022330	RRM_5	PF13893.6	1.3e-06	1	1
ENSLBEP00000022330	RRM_1	PF00076.22	3.3e-33	1	2
ENSLBEP00000022330	RRM_1	PF00076.22	3.3e-33	2	2
ENSLBEP00000022330	RRM_3	PF08777.11	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023508	-	1333	XM_020660580	ENSLBEP00000022330	265 (aa)	XP_020516236	-

Gene Model

Click here to download ENSLBEG00000017153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017153's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000017153	srsf5a	74	45.894	ENSLBEG00000017430	srsf9	76	45.894
ENSLBEG00000017153	srsf5a	74	67.005	ENSLBEG00000013647	srsf5b	70	64.019
ENSLBEG00000017153	srsf5a	69	42.021	ENSLBEG00000020864	-	71	42.021
ENSLBEG00000017153	srsf5a	69	42.021	ENSLBEG00000015294	-	67	43.085
ENSLBEG00000017153	srsf5a	72	60.938	ENSLBEG00000007356	srsf6a	50	61.780

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017153	srsf5a	91	81.743	ENSAPOG00000017395	srsf5a	62	83.077	Acanthochromis_polyacanthus
ENSLBEG00000017153	srsf5a	91	84.647	ENSACIG00000011892	srsf5a	96	88.028	Amphilophus_citrinellus
ENSLBEG00000017153	srsf5a	74	85.641	ENSAOCG00000014967	srsf5a	62	84.615	Amphiprion_ocellaris
ENSLBEG00000017153	srsf5a	74	85.641	ENSAPEG00000009297	srsf5a	62	84.615	Amphiprion_percula
ENSLBEG00000017153	srsf5a	74	90.256	ENSATEG00000000198	srsf5a	65	85.128	Anabas_testudineus
ENSLBEG00000017153	srsf5a	74	71.066	ENSAPLG00000002469	-	70	71.066	Anas_platyrhynchos
ENSLBEG00000017153	srsf5a	74	73.333	ENSACAG00000029015	-	68	71.282	Anolis_carolinensis
ENSLBEG00000017153	srsf5a	74	93.333	ENSACLG00000027166	srsf5a	65	92.821	Astatotilapia_calliptera
ENSLBEG00000017153	srsf5a	74	82.587	ENSAMXG00000030476	srsf5a	67	84.103	Astyanax_mexicanus
ENSLBEG00000017153	srsf5a	74	74.872	ENSCPBG00000021518	-	70	74.872	Chrysemys_picta_bellii
ENSLBEG00000017153	srsf5a	74	59.694	ENSCSAVG00000011376	-	78	59.694	Ciona_savignyi
ENSLBEG00000017153	srsf5a	74	92.386	ENSCSEG00000008109	srsf5a	62	91.371	Cynoglossus_semilaevis
ENSLBEG00000017153	srsf5a	72	84.293	ENSCVAG00000016982	srsf5a	96	86.861	Cyprinodon_variegatus
ENSLBEG00000017153	srsf5a	74	83.500	ENSDARG00000029818	srsf5a	100	77.083	Danio_rerio
ENSLBEG00000017153	srsf5a	80	76.279	ENSELUG00000020439	srsf5a	82	68.627	Esox_lucius
ENSLBEG00000017153	srsf5a	83	69.683	ENSFALG00000005098	-	64	71.282	Ficedula_albicollis
ENSLBEG00000017153	srsf5a	73	81.500	ENSFHEG00000003955	srsf5a	97	75.168	Fundulus_heteroclitus
ENSLBEG00000017153	srsf5a	74	80.513	ENSGMOG00000000869	srsf5a	94	81.026	Gadus_morhua
ENSLBEG00000017153	srsf5a	74	71.282	ENSGALG00000033259	SRSF5A	63	70.769	Gallus_gallus
ENSLBEG00000017153	srsf5a	74	71.282	ENSGAFG00000018237	srsf5a	54	71.282	Gambusia_affinis
ENSLBEG00000017153	srsf5a	74	85.641	ENSGACG00000011761	srsf5a	70	84.615	Gasterosteus_aculeatus
ENSLBEG00000017153	srsf5a	74	74.872	ENSGAGG00000007312	-	70	74.872	Gopherus_agassizii
ENSLBEG00000017153	srsf5a	74	92.821	ENSHBUG00000014048	srsf5a	64	92.308	Haplochromis_burtoni
ENSLBEG00000017153	srsf5a	74	84.103	ENSHCOG00000017557	srsf5a	62	83.590	Hippocampus_comes
ENSLBEG00000017153	srsf5a	74	84.615	ENSIPUG00000003439	srsf5a	69	83.077	Ictalurus_punctatus
ENSLBEG00000017153	srsf5a	74	83.590	ENSKMAG00000014937	srsf5a	58	83.590	Kryptolebias_marmoratus
ENSLBEG00000017153	srsf5a	74	76.923	ENSLACG00000017874	-	72	74.752	Latimeria_chalumnae
ENSLBEG00000017153	srsf5a	74	79.602	ENSLOCG00000014075	srsf5a	61	81.026	Lepisosteus_oculatus
ENSLBEG00000017153	srsf5a	74	87.179	ENSMAMG00000000192	srsf5a	65	83.590	Mastacembelus_armatus
ENSLBEG00000017153	srsf5a	74	92.821	ENSMZEG00005010485	srsf5a	64	92.308	Maylandia_zebra
ENSLBEG00000017153	srsf5a	77	69.756	ENSMGAG00000011888	-	96	69.492	Meleagris_gallopavo
ENSLBEG00000017153	srsf5a	91	83.817	ENSMMOG00000009793	srsf5a	77	85.062	Mola_mola
ENSLBEG00000017153	srsf5a	74	80.000	ENSMALG00000021194	srsf5a	63	80.000	Monopterus_albus
ENSLBEG00000017153	srsf5a	74	92.308	ENSNBRG00000000771	srsf5a	64	91.795	Neolamprologus_brichardi
ENSLBEG00000017153	srsf5a	74	92.308	ENSONIG00000019583	srsf5a	64	91.795	Oreochromis_niloticus
ENSLBEG00000017153	srsf5a	74	84.694	ENSORLG00000009268	srsf5a	67	83.590	Oryzias_latipes
ENSLBEG00000017153	srsf5a	74	84.694	ENSORLG00020003281	srsf5	67	83.590	Oryzias_latipes_hni
ENSLBEG00000017153	srsf5a	74	84.694	ENSORLG00015023075	srsf5	67	83.590	Oryzias_latipes_hsok
ENSLBEG00000017153	srsf5a	74	83.590	ENSOMEG00000000628	srsf5a	66	83.590	Oryzias_melastigma
ENSLBEG00000017153	srsf5a	74	82.564	ENSPKIG00000002054	srsf5a	68	82.051	Paramormyrops_kingsleyae
ENSLBEG00000017153	srsf5a	74	72.449	ENSPSIG00000008238	-	69	69.898	Pelodiscus_sinensis
ENSLBEG00000017153	srsf5a	74	78.173	ENSPMGG00000020125	srsf5a	71	66.532	Periophthalmus_magnuspinnatus
ENSLBEG00000017153	srsf5a	74	85.641	ENSPFOG00000022993	srsf5a	60	85.641	Poecilia_formosa
ENSLBEG00000017153	srsf5a	73	85.567	ENSPLAG00000005508	srsf5a	59	85.567	Poecilia_latipinna
ENSLBEG00000017153	srsf5a	74	85.641	ENSPMEG00000016339	srsf5a	60	85.641	Poecilia_mexicana
ENSLBEG00000017153	srsf5a	74	86.224	ENSPREG00000018091	srsf5a	61	85.714	Poecilia_reticulata
ENSLBEG00000017153	srsf5a	74	92.821	ENSPNYG00000021245	srsf5a	64	92.308	Pundamilia_nyererei
ENSLBEG00000017153	srsf5a	74	82.500	ENSPNAG00000021333	srsf5a	88	74.903	Pygocentrus_nattereri
ENSLBEG00000017153	srsf5a	74	79.703	ENSSFOG00015008377	srsf5	66	81.538	Scleropages_formosus
ENSLBEG00000017153	srsf5a	74	87.745	ENSSMAG00000010899	srsf5a	66	87.255	Scophthalmus_maximus
ENSLBEG00000017153	srsf5a	91	79.253	ENSSDUG00000006103	srsf5a	63	83.077	Seriola_dumerili
ENSLBEG00000017153	srsf5a	91	79.668	ENSSLDG00000004146	srsf5a	63	83.590	Seriola_lalandi_dorsalis
ENSLBEG00000017153	srsf5a	74	70.769	ENSSPUG00000002052	-	68	69.744	Sphenodon_punctatus
ENSLBEG00000017153	srsf5a	91	80.913	ENSSPAG00000002821	srsf5a	63	83.590	Stegastes_partitus
ENSLBEG00000017153	srsf5a	83	67.532	ENSTGUG00000011492	-	68	71.282	Taeniopygia_guttata
ENSLBEG00000017153	srsf5a	91	86.777	ENSTRUG00000022908	srsf5a	80	90.083	Takifugu_rubripes
ENSLBEG00000017153	srsf5a	74	72.059	ENSXETG00000017937	srsf5a	72	76.923	Xenopus_tropicalis
ENSLBEG00000017153	srsf5a	74	82.564	ENSXCOG00000015338	srsf5a	61	81.026	Xiphophorus_couchianus
ENSLBEG00000017153	srsf5a	74	85.279	ENSXMAG00000012823	srsf5a	61	85.279	Xiphophorus_maculatus