EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000017163 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 4111 bases
Position: chrFKLU01000179.1:428971-433081
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022335	RRM_1	PF00076.22	6.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023514	-	2108	-	ENSLBEP00000022335	108 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000017163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017163's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000017163	-	56	38.235	ENSLBEG00000027731	-	61	36.000
ENSLBEG00000017163	-	69	44.156	ENSLBEG00000000877	-	58	43.836
ENSLBEG00000017163	-	69	44.156	ENSLBEG00000013364	srsf3b	63	45.205
ENSLBEG00000017163	-	60	39.394	ENSLBEG00000028617	raly	73	39.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017163	-	81	97.727	ENSACIG00000018649	srsf4	65	98.701	Amphilophus_citrinellus
ENSLBEG00000017163	-	76	100.000	ENSAPEG00000020870	-	64	100.000	Amphiprion_percula
ENSLBEG00000017163	-	79	98.824	ENSACLG00000003395	srsf4	70	98.824	Astatotilapia_calliptera
ENSLBEG00000017163	-	76	89.024	ENSAMXG00000034811	srsf4	72	91.781	Astyanax_mexicanus
ENSLBEG00000017163	-	72	92.308	ENSDARG00000105293	srsf4	69	91.781	Danio_rerio
ENSLBEG00000017163	-	69	67.568	FBgn0004587	B52	53	69.014	Drosophila_melanogaster
ENSLBEG00000017163	-	70	81.579	ENSELUG00000017551	srsf4	50	80.822	Esox_lucius
ENSLBEG00000017163	-	76	98.780	ENSFHEG00000007472	srsf4	88	98.780	Fundulus_heteroclitus
ENSLBEG00000017163	-	79	98.824	ENSHBUG00000016897	-	77	98.824	Haplochromis_burtoni
ENSLBEG00000017163	-	79	98.824	ENSMZEG00005025078	-	77	98.824	Maylandia_zebra
ENSLBEG00000017163	-	79	98.824	ENSMZEG00005026275	srsf4	70	98.824	Maylandia_zebra
ENSLBEG00000017163	-	74	73.750	ENSMALG00000010062	-	78	75.342	Monopterus_albus
ENSLBEG00000017163	-	79	98.824	ENSNBRG00000014840	-	79	98.824	Neolamprologus_brichardi
ENSLBEG00000017163	-	77	100.000	ENSORLG00000028783	-	75	100.000	Oryzias_latipes
ENSLBEG00000017163	-	70	98.684	ENSPMGG00000013436	srsf4	54	98.630	Periophthalmus_magnuspinnatus
ENSLBEG00000017163	-	83	90.000	ENSSFOG00015020292	srsf4	72	97.403	Scleropages_formosus
ENSLBEG00000017163	-	77	83.133	ENSSPUG00000019124	-	82	84.932	Sphenodon_punctatus
ENSLBEG00000017163	-	75	98.765	ENSSPAG00000014538	srsf4	67	100.000	Stegastes_partitus
ENSLBEG00000017163	-	76	98.780	ENSXCOG00000018826	srsf4	56	100.000	Xiphophorus_couchianus
ENSLBEG00000017163	-	76	98.780	ENSXMAG00000021549	-	69	98.780	Xiphophorus_maculatus