EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000017203 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: protein STIP1 homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 10842 bases
Position: chrFKLU01002549.1:10152-20993
Accession: 110005937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022413	RRM_1	PF00076.22	8.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023592	-	4017	XM_020661202	ENSLBEP00000022413	598 (aa)	XP_020516858	-

Gene Model

Click here to download ENSLBEG00000017203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017203's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000017203	-	99	99.330	ENSLBEG00000021088	-	93	99.330
ENSLBEG00000017203	-	86	33.712	ENSLBEG00000028046	-	51	40.476

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017203	-	54	39.181	ENSAPOG00000022403	-	56	37.838	Acanthochromis_polyacanthus
ENSLBEG00000017203	-	99	57.213	ENSAPOG00000005058	si:dkey-33c12.4	91	57.377	Acanthochromis_polyacanthus
ENSLBEG00000017203	-	97	60.101	ENSAOCG00000020066	si:dkey-33c12.4	89	60.339	Amphiprion_ocellaris
ENSLBEG00000017203	-	54	38.889	ENSAOCG00000000431	-	55	38.378	Amphiprion_ocellaris
ENSLBEG00000017203	-	54	38.889	ENSAPEG00000023603	-	55	38.043	Amphiprion_percula
ENSLBEG00000017203	-	52	42.089	ENSATEG00000018302	-	57	40.331	Anabas_testudineus
ENSLBEG00000017203	-	99	58.017	ENSATEG00000018885	si:dkey-33c12.4	93	57.025	Anabas_testudineus
ENSLBEG00000017203	-	52	39.385	ENSACLG00000003019	-	60	38.211	Astatotilapia_calliptera
ENSLBEG00000017203	-	99	56.436	ENSACLG00000014192	si:dkey-33c12.4	90	54.110	Astatotilapia_calliptera
ENSLBEG00000017203	-	98	37.724	ENSAMXG00000010871	si:dkey-33c12.4	53	42.978	Astyanax_mexicanus
ENSLBEG00000017203	-	84	31.915	ENSCPBG00000024454	-	52	34.293	Chrysemys_picta_bellii
ENSLBEG00000017203	-	82	33.525	ENSCSEG00000002755	-	62	39.503	Cynoglossus_semilaevis
ENSLBEG00000017203	-	99	53.234	ENSCVAG00000006564	-	91	50.250	Cyprinodon_variegatus
ENSLBEG00000017203	-	56	37.696	ENSCVAG00000004187	-	60	37.696	Cyprinodon_variegatus
ENSLBEG00000017203	-	96	35.846	ENSDARG00000057890	si:dkey-33c12.4	52	40.000	Danio_rerio
ENSLBEG00000017203	-	81	33.737	ENSELUG00000001633	-	53	37.861	Esox_lucius
ENSLBEG00000017203	-	96	39.935	ENSELUG00000002009	si:dkey-33c12.4	94	36.052	Esox_lucius
ENSLBEG00000017203	-	99	56.240	ENSFHEG00000005521	si:dkey-33c12.4	91	53.744	Fundulus_heteroclitus
ENSLBEG00000017203	-	64	36.896	ENSFHEG00000009983	-	52	41.270	Fundulus_heteroclitus
ENSLBEG00000017203	-	55	35.952	ENSGALG00000036747	TTC31	57	35.952	Gallus_gallus
ENSLBEG00000017203	-	52	38.968	ENSGAFG00000016594	-	50	39.583	Gambusia_affinis
ENSLBEG00000017203	-	99	54.950	ENSGAFG00000017596	si:dkey-33c12.4	91	54.620	Gambusia_affinis
ENSLBEG00000017203	-	54	59.813	ENSGACG00000004936	-	82	58.567	Gasterosteus_aculeatus
ENSLBEG00000017203	-	99	56.601	ENSHBUG00000010735	si:dkey-33c12.4	90	55.556	Haplochromis_burtoni
ENSLBEG00000017203	-	98	36.026	ENSIPUG00000005998	si:dkey-33c12.4	58	40.148	Ictalurus_punctatus
ENSLBEG00000017203	-	76	32.563	ENSKMAG00000006468	-	56	39.216	Kryptolebias_marmoratus
ENSLBEG00000017203	-	99	56.167	ENSKMAG00000016610	si:dkey-33c12.4	90	54.742	Kryptolebias_marmoratus
ENSLBEG00000017203	-	56	38.667	ENSMAMG00000004311	-	70	36.239	Mastacembelus_armatus
ENSLBEG00000017203	-	99	62.938	ENSMAMG00000000111	si:dkey-33c12.4	91	62.437	Mastacembelus_armatus
ENSLBEG00000017203	-	56	36.364	ENSMZEG00005000585	-	61	37.366	Maylandia_zebra
ENSLBEG00000017203	-	99	56.343	ENSMZEG00005014276	si:dkey-33c12.4	90	55.298	Maylandia_zebra
ENSLBEG00000017203	-	56	38.770	ENSMALG00000003167	-	57	38.770	Monopterus_albus
ENSLBEG00000017203	-	99	61.269	ENSMALG00000002265	si:dkey-33c12.4	91	61.269	Monopterus_albus
ENSLBEG00000017203	-	54	38.040	ENSONIG00000007538	-	86	55.556	Oreochromis_niloticus
ENSLBEG00000017203	-	52	56.090	ENSONIG00000012263	-	80	72.189	Oreochromis_niloticus
ENSLBEG00000017203	-	99	49.169	ENSORLG00000029651	si:dkey-33c12.4	91	48.007	Oryzias_latipes
ENSLBEG00000017203	-	56	38.418	ENSORLG00000030385	-	56	39.031	Oryzias_latipes
ENSLBEG00000017203	-	50	33.223	ENSORLG00000007675	zgc:123010	52	31.908	Oryzias_latipes
ENSLBEG00000017203	-	99	48.166	ENSORLG00020008750	si:dkey-33c12.4	91	47.068	Oryzias_latipes_hni
ENSLBEG00000017203	-	50	33.779	ENSORLG00020003457	zgc:123010	52	32.237	Oryzias_latipes_hni
ENSLBEG00000017203	-	85	33.208	ENSORLG00015008400	-	56	39.031	Oryzias_latipes_hsok
ENSLBEG00000017203	-	97	49.351	ENSOMEG00000008913	-	91	48.248	Oryzias_melastigma
ENSLBEG00000017203	-	51	30.592	ENSPKIG00000015521	zgc:123010	55	30.392	Paramormyrops_kingsleyae
ENSLBEG00000017203	-	77	34.008	ENSPFOG00000017092	-	76	37.047	Poecilia_formosa
ENSLBEG00000017203	-	99	53.960	ENSPFOG00000009143	si:dkey-33c12.4	91	54.605	Poecilia_formosa
ENSLBEG00000017203	-	95	54.669	ENSPLAG00000022537	si:dkey-33c12.4	91	54.889	Poecilia_latipinna
ENSLBEG00000017203	-	99	53.465	ENSPMEG00000015590	si:dkey-33c12.4	91	54.112	Poecilia_mexicana
ENSLBEG00000017203	-	52	39.823	ENSPMEG00000009905	-	59	37.306	Poecilia_mexicana
ENSLBEG00000017203	-	52	39.589	ENSPREG00000016861	-	52	39.763	Poecilia_reticulata
ENSLBEG00000017203	-	99	56.507	ENSPNYG00000018262	si:dkey-33c12.4	90	55.464	Pundamilia_nyererei
ENSLBEG00000017203	-	59	37.333	ENSPNYG00000001047	-	60	38.482	Pundamilia_nyererei
ENSLBEG00000017203	-	97	35.008	ENSPNAG00000018386	si:dkey-33c12.4	52	41.972	Pygocentrus_nattereri
ENSLBEG00000017203	-	91	35.816	ENSSFOG00015005186	-	50	43.692	Scleropages_formosus
ENSLBEG00000017203	-	86	35.962	ENSSFOG00015009199	-	53	39.326	Scleropages_formosus
ENSLBEG00000017203	-	99	59.217	ENSSMAG00000008147	si:dkey-33c12.4	91	60.000	Scophthalmus_maximus
ENSLBEG00000017203	-	62	33.067	ENSSMAG00000002904	zgc:123010	50	33.445	Scophthalmus_maximus
ENSLBEG00000017203	-	55	40.233	ENSSMAG00000010960	-	58	39.402	Scophthalmus_maximus
ENSLBEG00000017203	-	67	33.333	ENSSMAG00000021096	-	50	38.378	Scophthalmus_maximus
ENSLBEG00000017203	-	99	62.706	ENSSDUG00000003213	si:dkey-33c12.4	91	61.960	Seriola_dumerili
ENSLBEG00000017203	-	52	42.121	ENSSDUG00000010976	-	52	42.121	Seriola_dumerili
ENSLBEG00000017203	-	56	40.000	ENSSLDG00000012846	-	61	40.000	Seriola_lalandi_dorsalis
ENSLBEG00000017203	-	99	62.706	ENSSLDG00000009448	si:dkey-33c12.4	91	62.729	Seriola_lalandi_dorsalis
ENSLBEG00000017203	-	54	38.012	ENSSPAG00000004843	-	56	36.729	Stegastes_partitus
ENSLBEG00000017203	-	99	59.446	ENSSPAG00000022577	-	90	59.638	Stegastes_partitus
ENSLBEG00000017203	-	55	35.435	ENSTRUG00000000057	-	57	35.447	Takifugu_rubripes
ENSLBEG00000017203	-	52	61.736	ENSTRUG00000022374	si:dkey-33c12.4	83	48.142	Takifugu_rubripes
ENSLBEG00000017203	-	50	32.776	ENSXMAG00000002598	zgc:123010	52	32.226	Xiphophorus_maculatus
ENSLBEG00000017203	-	99	55.757	ENSXMAG00000018535	si:dkey-33c12.4	91	55.099	Xiphophorus_maculatus