EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000017296 (Gene tree)
Gene ID: -
Gene Symbol: cnot3a
Alias: fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name: CCR4-NOT transcription complex subunit 3
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5701 bases
Position: chrFKLU01000265.1:722900-728600
Accession: 109993711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022581	Not3	PF04065.15	2e-96	1	1
ENSLBEP00000022581	NOT2_3_5	PF04153.18	2.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023762	-	2196	XM_020646764	ENSLBEP00000022581	731 (aa)	XP_020502420	-

Gene Model

Click here to download ENSLBEG00000017296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000017296	cnot3a	91	85.405	ENSLBEG00000018278	cnot3b	54	88.281

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017296	cnot3a	65	88.327	ENSAPOG00000015002	cnot3b	67	88.312	Acanthochromis_polyacanthus
ENSLBEG00000017296	cnot3a	60	88.256	ENSAPOG00000015499	CNOT3	80	88.256	Acanthochromis_polyacanthus
ENSLBEG00000017296	cnot3a	61	91.518	ENSACIG00000003652	cnot3b	79	84.959	Amphilophus_citrinellus
ENSLBEG00000017296	cnot3a	96	95.982	ENSACIG00000006635	cnot3a	90	93.117	Amphilophus_citrinellus
ENSLBEG00000017296	cnot3a	64	87.558	ENSAOCG00000018385	-	74	85.526	Amphiprion_ocellaris
ENSLBEG00000017296	cnot3a	67	96.809	ENSAOCG00000023769	cnot3a	81	90.338	Amphiprion_ocellaris
ENSLBEG00000017296	cnot3a	65	88.077	ENSAPEG00000002640	cnot3b	78	87.558	Amphiprion_percula
ENSLBEG00000017296	cnot3a	68	99.083	ENSAPEG00000006624	cnot3a	81	99.083	Amphiprion_percula
ENSLBEG00000017296	cnot3a	95	97.706	ENSATEG00000022737	cnot3a	83	97.706	Anabas_testudineus
ENSLBEG00000017296	cnot3a	66	90.234	ENSATEG00000015777	cnot3b	52	90.234	Anabas_testudineus
ENSLBEG00000017296	cnot3a	64	91.732	ENSACLG00000016702	cnot3b	51	91.732	Astatotilapia_calliptera
ENSLBEG00000017296	cnot3a	95	95.928	ENSACLG00000021136	cnot3a	83	95.928	Astatotilapia_calliptera
ENSLBEG00000017296	cnot3a	82	90.391	ENSAMXG00000009447	cnot3b	63	91.429	Astyanax_mexicanus
ENSLBEG00000017296	cnot3a	65	91.765	ENSAMXG00000012359	cnot3a	63	91.743	Astyanax_mexicanus
ENSLBEG00000017296	cnot3a	100	65.531	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSLBEG00000017296	cnot3a	57	69.302	ENSCGRG00000012929	Cnot3	74	67.907	Cricetulus_griseus_crigri
ENSLBEG00000017296	cnot3a	94	77.778	ENSCSEG00000016892	cnot3b	54	85.156	Cynoglossus_semilaevis
ENSLBEG00000017296	cnot3a	95	97.696	ENSCSEG00000003574	cnot3a	81	97.696	Cynoglossus_semilaevis
ENSLBEG00000017296	cnot3a	68	95.699	ENSCVAG00000008168	cnot3a	82	93.213	Cyprinodon_variegatus
ENSLBEG00000017296	cnot3a	67	87.402	ENSCVAG00000022122	cnot3b	55	87.402	Cyprinodon_variegatus
ENSLBEG00000017296	cnot3a	65	93.333	ENSDARG00000007135	cnot3a	66	92.969	Danio_rerio
ENSLBEG00000017296	cnot3a	65	89.844	ENSDARG00000019842	cnot3b	53	89.844	Danio_rerio
ENSLBEG00000017296	cnot3a	100	64.314	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSLBEG00000017296	cnot3a	61	66.082	FBgn0033029	Not3	50	66.929	Drosophila_melanogaster
ENSLBEG00000017296	cnot3a	57	100.000	ENSETEG00000006305	CNOT3	51	100.000	Echinops_telfairi
ENSLBEG00000017296	cnot3a	64	89.370	ENSELUG00000000953	cnot3b	50	89.370	Esox_lucius
ENSLBEG00000017296	cnot3a	95	96.789	ENSELUG00000014743	cnot3a	54	96.789	Esox_lucius
ENSLBEG00000017296	cnot3a	68	94.495	ENSFHEG00000023166	cnot3a	71	96.581	Fundulus_heteroclitus
ENSLBEG00000017296	cnot3a	74	87.795	ENSFHEG00000001696	cnot3b	56	87.795	Fundulus_heteroclitus
ENSLBEG00000017296	cnot3a	89	95.122	ENSGMOG00000005365	cnot3a	69	95.122	Gadus_morhua
ENSLBEG00000017296	cnot3a	87	77.027	ENSGAFG00000003459	cnot3b	66	87.008	Gambusia_affinis
ENSLBEG00000017296	cnot3a	68	94.681	ENSGAFG00000013094	cnot3a	55	94.681	Gambusia_affinis
ENSLBEG00000017296	cnot3a	61	96.894	ENSGACG00000011489	cnot3a	51	96.894	Gasterosteus_aculeatus
ENSLBEG00000017296	cnot3a	78	81.203	ENSGACG00000009395	cnot3b	79	71.538	Gasterosteus_aculeatus
ENSLBEG00000017296	cnot3a	69	80.851	ENSHBUG00000019699	cnot3b	53	81.277	Haplochromis_burtoni
ENSLBEG00000017296	cnot3a	95	95.928	ENSHBUG00000005275	cnot3a	83	95.928	Haplochromis_burtoni
ENSLBEG00000017296	cnot3a	95	93.119	ENSHCOG00000020968	cnot3a	73	97.009	Hippocampus_comes
ENSLBEG00000017296	cnot3a	93	94.017	ENSIPUG00000000167	cnot3	61	94.017	Ictalurus_punctatus
ENSLBEG00000017296	cnot3a	94	81.281	ENSIPUG00000009046	cnot3b	75	81.281	Ictalurus_punctatus
ENSLBEG00000017296	cnot3a	52	69.802	ENSJJAG00000014594	Cnot3	100	80.460	Jaculus_jaculus
ENSLBEG00000017296	cnot3a	66	90.157	ENSKMAG00000018723	cnot3b	53	90.157	Kryptolebias_marmoratus
ENSLBEG00000017296	cnot3a	97	93.213	ENSKMAG00000004863	cnot3a	100	80.705	Kryptolebias_marmoratus
ENSLBEG00000017296	cnot3a	61	95.210	ENSLOCG00000000005	cnot3b	71	92.308	Lepisosteus_oculatus
ENSLBEG00000017296	cnot3a	92	89.453	ENSMAMG00000019357	cnot3b	52	89.453	Mastacembelus_armatus
ENSLBEG00000017296	cnot3a	68	96.833	ENSMAMG00000019397	cnot3a	81	96.262	Mastacembelus_armatus
ENSLBEG00000017296	cnot3a	95	95.928	ENSMZEG00005016304	cnot3a	83	95.928	Maylandia_zebra
ENSLBEG00000017296	cnot3a	64	91.732	ENSMZEG00005002466	cnot3b	51	91.732	Maylandia_zebra
ENSLBEG00000017296	cnot3a	56	100.000	ENSMOCG00000013249	Cnot3	53	100.000	Microtus_ochrogaster
ENSLBEG00000017296	cnot3a	87	90.625	ENSMMOG00000016446	cnot3a	55	95.946	Mola_mola
ENSLBEG00000017296	cnot3a	62	89.316	ENSMMOG00000013086	cnot3b	75	87.097	Mola_mola
ENSLBEG00000017296	cnot3a	97	96.774	ENSMALG00000009204	cnot3a	55	96.774	Monopterus_albus
ENSLBEG00000017296	cnot3a	100	65.390	MGP_CAROLIEiJ_G0029095	Cnot3	100	98.000	Mus_caroli
ENSLBEG00000017296	cnot3a	100	65.390	ENSMUSG00000035632	Cnot3	100	98.000	Mus_musculus
ENSLBEG00000017296	cnot3a	100	65.390	MGP_PahariEiJ_G0020964	Cnot3	100	98.000	Mus_pahari
ENSLBEG00000017296	cnot3a	100	65.390	MGP_SPRETEiJ_G0030148	Cnot3	100	98.000	Mus_spretus
ENSLBEG00000017296	cnot3a	99	63.179	ENSNBRG00000003336	cnot3b	89	88.938	Neolamprologus_brichardi
ENSLBEG00000017296	cnot3a	68	97.133	ENSNBRG00000002401	cnot3a	83	95.928	Neolamprologus_brichardi
ENSLBEG00000017296	cnot3a	52	100.000	ENSOPRG00000001605	-	51	100.000	Ochotona_princeps
ENSLBEG00000017296	cnot3a	100	65.144	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSLBEG00000017296	cnot3a	64	91.339	ENSONIG00000007047	cnot3b	51	91.339	Oreochromis_niloticus
ENSLBEG00000017296	cnot3a	95	95.872	ENSONIG00000006568	cnot3a	82	95.872	Oreochromis_niloticus
ENSLBEG00000017296	cnot3a	65	96.484	ENSORLG00000011174	cnot3a	53	96.484	Oryzias_latipes
ENSLBEG00000017296	cnot3a	66	90.157	ENSORLG00000005982	cnot3b	54	90.157	Oryzias_latipes
ENSLBEG00000017296	cnot3a	66	90.157	ENSORLG00020005779	cnot3b	53	90.157	Oryzias_latipes_hni
ENSLBEG00000017296	cnot3a	65	96.094	ENSORLG00020008009	cnot3a	53	96.094	Oryzias_latipes_hni
ENSLBEG00000017296	cnot3a	91	90.157	ENSORLG00015019021	cnot3b	51	90.157	Oryzias_latipes_hsok
ENSLBEG00000017296	cnot3a	65	96.094	ENSORLG00015013729	cnot3a	53	96.094	Oryzias_latipes_hsok
ENSLBEG00000017296	cnot3a	68	95.035	ENSOMEG00000010309	cnot3a	55	96.078	Oryzias_melastigma
ENSLBEG00000017296	cnot3a	64	90.157	ENSOMEG00000015557	cnot3b	52	90.157	Oryzias_melastigma
ENSLBEG00000017296	cnot3a	77	89.007	ENSPTIG00000008781	CNOT3	81	90.157	Panthera_tigris_altaica
ENSLBEG00000017296	cnot3a	62	94.017	ENSPKIG00000015967	-	78	91.284	Paramormyrops_kingsleyae
ENSLBEG00000017296	cnot3a	85	89.418	ENSPKIG00000011733	CNOT3	80	89.418	Paramormyrops_kingsleyae
ENSLBEG00000017296	cnot3a	66	89.734	ENSPMGG00000022539	cnot3b	99	57.990	Periophthalmus_magnuspinnatus
ENSLBEG00000017296	cnot3a	68	89.362	ENSPCIG00000023018	CNOT3	94	89.399	Phascolarctos_cinereus
ENSLBEG00000017296	cnot3a	74	86.220	ENSPFOG00000007168	cnot3b	55	86.220	Poecilia_formosa
ENSLBEG00000017296	cnot3a	68	94.681	ENSPFOG00000008693	cnot3a	78	94.495	Poecilia_formosa
ENSLBEG00000017296	cnot3a	96	84.615	ENSPLAG00000013457	cnot3b	67	86.429	Poecilia_latipinna
ENSLBEG00000017296	cnot3a	68	94.681	ENSPLAG00000013324	cnot3a	55	94.681	Poecilia_latipinna
ENSLBEG00000017296	cnot3a	68	94.681	ENSPMEG00000017718	cnot3a	55	94.681	Poecilia_mexicana
ENSLBEG00000017296	cnot3a	74	86.220	ENSPMEG00000010184	cnot3b	68	86.429	Poecilia_mexicana
ENSLBEG00000017296	cnot3a	69	94.346	ENSPREG00000007592	cnot3a	77	94.495	Poecilia_reticulata
ENSLBEG00000017296	cnot3a	97	72.119	ENSPREG00000000662	cnot3b	60	80.565	Poecilia_reticulata
ENSLBEG00000017296	cnot3a	69	90.288	ENSPNYG00000003358	cnot3b	55	90.476	Pundamilia_nyererei
ENSLBEG00000017296	cnot3a	95	95.928	ENSPNYG00000002282	cnot3a	83	95.928	Pundamilia_nyererei
ENSLBEG00000017296	cnot3a	89	88.652	ENSPNAG00000027459	cnot3b	62	88.672	Pygocentrus_nattereri
ENSLBEG00000017296	cnot3a	89	93.119	ENSPNAG00000017679	cnot3a	85	91.429	Pygocentrus_nattereri
ENSLBEG00000017296	cnot3a	86	91.135	ENSSFOG00015019203	-	56	91.135	Scleropages_formosus
ENSLBEG00000017296	cnot3a	88	91.284	ENSSFOG00015000248	cnot3	77	91.284	Scleropages_formosus
ENSLBEG00000017296	cnot3a	66	89.844	ENSSMAG00000016031	cnot3b	52	89.844	Scophthalmus_maximus
ENSLBEG00000017296	cnot3a	68	97.738	ENSSMAG00000013235	cnot3a	83	97.738	Scophthalmus_maximus
ENSLBEG00000017296	cnot3a	68	98.182	ENSSDUG00000008181	cnot3a	78	99.541	Seriola_dumerili
ENSLBEG00000017296	cnot3a	91	89.453	ENSSDUG00000003428	cnot3b	50	89.453	Seriola_dumerili
ENSLBEG00000017296	cnot3a	91	89.453	ENSSLDG00000014376	cnot3b	50	89.453	Seriola_lalandi_dorsalis
ENSLBEG00000017296	cnot3a	64	97.849	ENSSLDG00000014733	cnot3a	81	97.354	Seriola_lalandi_dorsalis
ENSLBEG00000017296	cnot3a	92	97.321	ENSSPAG00000003858	cnot3a	81	98.925	Stegastes_partitus
ENSLBEG00000017296	cnot3a	96	85.526	ENSSPAG00000001429	cnot3b	81	78.486	Stegastes_partitus
ENSLBEG00000017296	cnot3a	68	97.706	ENSTRUG00000015732	cnot3a	56	97.706	Takifugu_rubripes
ENSLBEG00000017296	cnot3a	88	96.364	ENSTNIG00000008082	cnot3a	53	96.809	Tetraodon_nigroviridis
ENSLBEG00000017296	cnot3a	72	88.571	ENSUMAG00000010934	CNOT3	91	88.976	Ursus_maritimus
ENSLBEG00000017296	cnot3a	65	87.843	ENSXETG00000003166	cnot3	53	88.235	Xenopus_tropicalis
ENSLBEG00000017296	cnot3a	96	67.073	ENSXCOG00000018976	cnot3b	57	86.614	Xiphophorus_couchianus
ENSLBEG00000017296	cnot3a	95	91.364	ENSXCOG00000019460	cnot3a	89	94.718	Xiphophorus_couchianus
ENSLBEG00000017296	cnot3a	95	94.037	ENSXMAG00000012273	cnot3a	55	94.681	Xiphophorus_maculatus
ENSLBEG00000017296	cnot3a	74	86.614	ENSXMAG00000014176	cnot3b	68	86.614	Xiphophorus_maculatus